RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 KCNF1Q9H3M0 494 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 LRRC40Q9H9A6 602 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 ASCL3Q9NQ33 180 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 KLC4Q9NSK0 619 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 SMOXQ9NWM0 555 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 PIH1D1Q9NWS0 290 aaKnown RBP5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.92□□□□□ -1.462e-6■□□□□ 9.2
CTDSPL2-204ENST00000558966 SATB2Q9UPW6 733 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 ADAMTS20P59510 1910 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 PIKFYVEQ9Y2I7 2098 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 A0A087WV48 116 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 IGHV1OR21-1A0A087WYE8 117 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 CCDC187A0A096LP49 1063 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 C2orf81A6NN90 581 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 AGAP14A8MT82 685 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 CCL22O00626 93 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 KMOO15229 486 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 SNX2O60749 519 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 SRP72O76094 671 aaKnown RBP5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 PRAMEF1O95521 474 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 IFNB1P01574 187 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 FGGP02679 453 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 F3P13726 295 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 BRAFP15056 766 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 ZNF7P17097 686 aaPredicted RBP5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 CD1CP29017 333 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 ALDH4A1P30038 563 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 STIP1P31948 543 aaKnown RBP5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 CXCR5P32302 372 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 CSF2RBP32927 897 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 GPR3P46089 330 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 CTSCP53634 463 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 INHBCP55103 352 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 UBE2IP63279 158 aaKnown RBP5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 TMPRSS15P98073 1019 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 HHEXQ03014 270 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 CFHR1Q03591 330 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 ZFP36L1Q07352 338 aaKnown RBP5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 TMEM115Q12893 351 aaPredicted RBP5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 NFATC2Q13469 925 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 SNX1Q13596 522 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 ITGA9Q13797 1035 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 INSCQ1MX18 579 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 AMZ1Q400G9 498 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 LDLRAP1Q5SW96 308 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 IGF2-ASQ6U949 168 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 TREML4Q6UXN2 200 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 UNC5AQ6ZN44 842 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 ZNF761Q86XN6 746 aaPredicted RBP5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 TRAPPC5Q8IUR0 188 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 RASGEF1AQ8N9B8 481 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 C19orf47Q8N9M1 422 aaKnown RBP5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 FAM13CQ8NE31 585 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 GDAP1Q8TB36 358 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 NAT14Q8WUY8 206 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 DNAJC1Q96KC8 554 aaKnown RBP5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 DPH2Q9BQC3 489 aaPredicted RBP5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 NUDT22Q9BRQ3 303 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 TIMM29Q9BSF4 260 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 SEMA6CQ9H3T2 930 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 OSGEPL1Q9H4B0 414 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 RDH14Q9HBH5 336 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 EPB41L5Q9HCM4 733 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 PRDM8Q9NQV8 689 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 FEZ2Q9UHY8 353 aaPredicted RBP5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 PCDHB10Q9UN67 800 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 ZNF148Q9UQR1 794 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 DNAJC16Q9Y2G8 782 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 PCDHGA8Q9Y5G5 932 aa5.92□□□□□ -1.46
CTDSPL2-204ENST00000558966 CACNA1GO43497 2377 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 SMG1Q96Q15 3661 aaKnown RBP5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 ATMQ13315 3056 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 MEGF11A6BM72 1044 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 CDRT15L2A8MXV6 281 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 GNB5O14775 395 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 PLD2O14939 933 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 FANCGO15287 622 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 SGTAO43765 313 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 CEP104O60308 925 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 CRTAMO95727 393 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 CPNE6O95741 557 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 ZSCAN5DPP0CG00 497 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 PRSS56P0CW18 603 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 HGFP14210 728 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 TPH1P17752 444 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 ACTN2P35609 894 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 EIF2S3P41091 472 aaKnown RBP5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 GRIA1P42261 906 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 BIRC2Q13490 618 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 SQSTM1Q13501 440 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 SEMA5AQ13591 1074 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 GTF2H3Q13889 308 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 POU6F1Q14863 301 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 CCNG2Q16589 344 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 NKG7Q16617 165 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 KCTD19Q17RG1 926 aaPredicted RBP5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 MAP9Q49MG5 647 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 NKAIN2Q5VXU1 208 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 DRICH1Q6PGQ1 229 aaPredicted RBP5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 ZNF574Q6ZN55 896 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms