RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 CDC7O00311 574 aa17.7■□□□□ 0.42
CLPX-203ENST00000558958 BTN3A1O00481 513 aa17.7■□□□□ 0.42
CLPX-203ENST00000558958 PROCP04070 461 aa17.7■□□□□ 0.42
CLPX-203ENST00000558958 BLKP51451 505 aa17.7■□□□□ 0.42
CLPX-203ENST00000558958 C21orf59P57076 290 aa17.7■□□□□ 0.42
CLPX-203ENST00000558958 CTBSQ01459 385 aa17.7■□□□□ 0.42
CLPX-203ENST00000558958 ZNF542PQ5EBM4 170 aa17.7■□□□□ 0.42
CLPX-203ENST00000558958 TECRLQ5HYJ1 363 aa17.7■□□□□ 0.42
CLPX-203ENST00000558958 PHACTR4Q8IZ21 702 aa17.7■□□□□ 0.42
CLPX-203ENST00000558958 FAM76AQ8TAV0 307 aa17.7■□□□□ 0.42
CLPX-203ENST00000558958 MDM1Q8TC05 714 aa17.7■□□□□ 0.42
CLPX-203ENST00000558958 SCYL1Q96KG9 808 aa17.7■□□□□ 0.42
CLPX-203ENST00000558958 MRPL57Q9BQC6 102 aaKnown RBP17.7■□□□□ 0.42
CLPX-203ENST00000558958 OR52A5Q9H2C5 316 aa17.7■□□□□ 0.42
CLPX-203ENST00000558958 TCEAL2Q9H3H9 227 aaPredicted RBP17.7■□□□□ 0.42
CLPX-203ENST00000558958 ALG9Q9H6U8 611 aa17.7■□□□□ 0.42
CLPX-203ENST00000558958 CNOT10Q9H9A5 744 aaKnown RBP17.7■□□□□ 0.42
CLPX-203ENST00000558958 NKIRAS1Q9NYS0 192 aa17.7■□□□□ 0.42
CLPX-203ENST00000558958 ACSL5Q9ULC5 683 aa17.7■□□□□ 0.42
CLPX-203ENST00000558958 LRP4O75096 1905 aa17.7■□□□□ 0.42
CLPX-203ENST00000558958 KNL1Q8NG31 2342 aa17.7■□□□□ 0.42
CLPX-203ENST00000558958 CCDC189A1A4V9 331 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 H3BM21 787 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 CSF2P04141 144 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 RBP1P09455 135 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 SBK3P0C264 359 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 HOXD12P35452 270 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 CLCNKAP51800 687 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 OR4D1Q15615 310 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 TSNQ15631 228 aaKnown RBP17.69■□□□□ 0.42
CLPX-203ENST00000558958 LVRNQ6Q4G3 990 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 PRR23BQ6ZRT6 265 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 ARFGAP2Q8N6H7 521 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 RHEBL1Q8TAI7 183 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 PIGKQ92643 395 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 MRPL46Q9H2W6 279 aaKnown RBP17.69■□□□□ 0.42
CLPX-203ENST00000558958 DNAJC28Q9NX36 388 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 XPR1Q9UBH6 696 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 A0A1B0GVT2 93 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 NPEPPSL1A6NEC2 478 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 TARM1B6A8C7 271 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 TK2O00142 265 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 MATN4O95460 622 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 NME1P15531 152 aaKnown RBP17.69■□□□□ 0.42
CLPX-203ENST00000558958 JUNDP17535 347 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 DPP6P42658 865 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 KCNC1P48547 511 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 ATP1A2P50993 1020 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 WDR4P57081 412 aaKnown RBP17.69■□□□□ 0.42
CLPX-203ENST00000558958 SEPT7Q16181 437 aaKnown RBP17.69■□□□□ 0.42
CLPX-203ENST00000558958 MTERF4Q7Z6M4 381 aaKnown RBP17.69■□□□□ 0.42
CLPX-203ENST00000558958 RASGRP3Q8IV61 690 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 ARMC2Q8NEN0 867 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 CCL4L1Q8NHW4 92 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 STAG3L4Q8TBR4 150 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 GPBAR1Q8TDU6 330 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 SKA2Q8WVK7 121 aaPredicted RBP17.69■□□□□ 0.42
CLPX-203ENST00000558958 ASB11Q8WXH4 323 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 OSGEPL1Q9H4B0 414 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 CAAP1Q9H8G2 361 aa17.69■□□□□ 0.42
CLPX-203ENST00000558958 CPSF2Q9P2I0 782 aaKnown RBP17.69■□□□□ 0.42
CLPX-203ENST00000558958 USP34Q70CQ2 3546 aa17.68■□□□□ 0.42
CLPX-203ENST00000558958 GFYI3L273 518 aa17.68■□□□□ 0.42
CLPX-203ENST00000558958 DHRS4L1P0CG22 281 aa17.68■□□□□ 0.42
CLPX-203ENST00000558958 CHN1P15882 459 aa17.68■□□□□ 0.42
CLPX-203ENST00000558958 IDSP22304 550 aa17.68■□□□□ 0.42
CLPX-203ENST00000558958 AK4P27144 223 aaPredicted RBP17.68■□□□□ 0.42
CLPX-203ENST00000558958 ACADLP28330 430 aa17.68■□□□□ 0.42
CLPX-203ENST00000558958 IRX4P78413 519 aa17.68■□□□□ 0.42
CLPX-203ENST00000558958 ILF3Q12906 894 aaKnown RBP eCLIP17.68■□□□□ 0.42
CLPX-203ENST00000558958 ABRQ12979 859 aa17.68■□□□□ 0.42
CLPX-203ENST00000558958 SBSNQ6UWP8 590 aa17.68■□□□□ 0.42
CLPX-203ENST00000558958 ADAMTSL2Q86TH1 951 aa17.68■□□□□ 0.42
CLPX-203ENST00000558958 PDZD3Q86UT5 571 aa17.68■□□□□ 0.42
CLPX-203ENST00000558958 NRROSQ86YC3 692 aa17.68■□□□□ 0.42
CLPX-203ENST00000558958 MGARPQ8TDB4 240 aa17.68■□□□□ 0.42
CLPX-203ENST00000558958 ATOH8Q96SQ7 321 aa17.68■□□□□ 0.42
CLPX-203ENST00000558958 LRFN3Q9BTN0 628 aa17.68■□□□□ 0.42
CLPX-203ENST00000558958 ERVMER34-1Q9H9K5 563 aa17.68■□□□□ 0.42
CLPX-203ENST00000558958 MLXIPLQ9NP71 852 aa17.68■□□□□ 0.42
CLPX-203ENST00000558958 APOBEC3BQ9UH17 382 aaKnown RBP17.68■□□□□ 0.42
CLPX-203ENST00000558958 ADAMTS6Q9UKP5 1117 aa17.68■□□□□ 0.42
CLPX-203ENST00000558958 VPS13AQ96RL7 3174 aa17.67■□□□□ 0.42
CLPX-203ENST00000558958 KERAO60938 352 aa17.67■□□□□ 0.42
CLPX-203ENST00000558958 C8GP07360 202 aa17.67■□□□□ 0.42
CLPX-203ENST00000558958 RPL10P27635 214 aaKnown RBP17.67■□□□□ 0.42
CLPX-203ENST00000558958 CTSKP43235 329 aa17.67■□□□□ 0.42
CLPX-203ENST00000558958 MAPK9P45984 424 aa17.67■□□□□ 0.42
CLPX-203ENST00000558958 BNC1Q01954 994 aa17.67■□□□□ 0.42
CLPX-203ENST00000558958 SP140Q13342 867 aa17.67■□□□□ 0.42
CLPX-203ENST00000558958 TCEA2Q15560 299 aa17.67■□□□□ 0.42
CLPX-203ENST00000558958 PPP1R3AQ16821 1122 aa17.67■□□□□ 0.42
CLPX-203ENST00000558958 KIF19Q2TAC6 998 aa17.67■□□□□ 0.42
CLPX-203ENST00000558958 CAPRIN2Q6IMN6 1127 aaKnown RBP17.67■□□□□ 0.42
CLPX-203ENST00000558958 CCDC63Q8NA47 563 aa17.67■□□□□ 0.42
CLPX-203ENST00000558958 SPDYE1Q8NFV5 336 aaPredicted RBP17.67■□□□□ 0.42
CLPX-203ENST00000558958 RDH11Q8TC12 318 aa17.67■□□□□ 0.42
CLPX-203ENST00000558958 DLG3Q92796 817 aa17.67■□□□□ 0.42
CLPX-203ENST00000558958 GSDMCQ9BYG8 508 aa17.67■□□□□ 0.42
CLPX-203ENST00000558958 WWP1Q9H0M0 922 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms