RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 RPS6KL1Q9Y6S9 549 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 TTI1O43156 1089 aa12.2□□□□□ -0.46
SLIRP-211ENST00000557623 OR1I1O60431 355 aa12.2□□□□□ -0.46
SLIRP-211ENST00000557623 TUBB4AP04350 444 aa12.2□□□□□ -0.46
SLIRP-211ENST00000557623 ITGA2BP08514 1039 aa12.2□□□□□ -0.46
SLIRP-211ENST00000557623 OGNP20774 298 aaKnown RBP12.2□□□□□ -0.46
SLIRP-211ENST00000557623 RPS3P23396 243 aaKnown RBP eCLIP12.2□□□□□ -0.465e-12■■■■■ 28.9
SLIRP-211ENST00000557623 IVDP26440 423 aa12.2□□□□□ -0.46
SLIRP-211ENST00000557623 ARNTP27540 789 aa12.2□□□□□ -0.46
SLIRP-211ENST00000557623 CFHR1Q03591 330 aa12.2□□□□□ -0.46
SLIRP-211ENST00000557623 THOC5Q13769 683 aaKnown RBP12.2□□□□□ -0.46
SLIRP-211ENST00000557623 PLCL1Q15111 1095 aa12.2□□□□□ -0.46
SLIRP-211ENST00000557623 ZNF658BQ4V348 819 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-211ENST00000557623 SYTL3Q4VX76 610 aa12.2□□□□□ -0.46
SLIRP-211ENST00000557623 XKR5Q6UX68 686 aa12.2□□□□□ -0.46
SLIRP-211ENST00000557623 MAATS1Q7Z4T9 603 aa12.2□□□□□ -0.46
SLIRP-211ENST00000557623 LDB1Q86U70 411 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-211ENST00000557623 TMEM135Q86UB9 458 aa12.2□□□□□ -0.46
SLIRP-211ENST00000557623 LMNTD2Q8IXW0 634 aa12.2□□□□□ -0.46
SLIRP-211ENST00000557623 LILRA3Q8N6C8 439 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-211ENST00000557623 BBOF1Q8ND07 529 aa12.2□□□□□ -0.46
SLIRP-211ENST00000557623 AGBL5Q8NDL9 886 aa12.2□□□□□ -0.46
SLIRP-211ENST00000557623 SPATA4Q8NEY3 305 aa12.2□□□□□ -0.46
SLIRP-211ENST00000557623 GPR150Q8NGU9 434 aa12.2□□□□□ -0.46
SLIRP-211ENST00000557623 SNIP1Q8TAD8 396 aaKnown RBP12.2□□□□□ -0.46
SLIRP-211ENST00000557623 GABPB2Q8TAK5 448 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-211ENST00000557623 FGF11Q92914 225 aa12.2□□□□□ -0.46
SLIRP-211ENST00000557623 TRIM44Q96DX7 344 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-211ENST00000557623 STAMBPL1Q96FJ0 436 aa12.2□□□□□ -0.46
SLIRP-211ENST00000557623 SNF8Q96H20 258 aa12.2□□□□□ -0.46
SLIRP-211ENST00000557623 PRR11Q96HE9 360 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-211ENST00000557623 SIGLEC10Q96LC7 697 aa12.2□□□□□ -0.46
SLIRP-211ENST00000557623 RMDN2Q96LZ7 410 aa12.2□□□□□ -0.46
SLIRP-211ENST00000557623 PANX3Q96QZ0 392 aa12.2□□□□□ -0.46
SLIRP-211ENST00000557623 NAT9Q9BTE0 207 aa12.2□□□□□ -0.46
SLIRP-211ENST00000557623 RAB33BQ9H082 229 aa12.2□□□□□ -0.46
SLIRP-211ENST00000557623 OR52A5Q9H2C5 316 aa12.2□□□□□ -0.46
SLIRP-211ENST00000557623 MARCH4Q9P2E8 410 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-211ENST00000557623 CFAP20Q9Y6A4 193 aaKnown RBP12.2□□□□□ -0.46
SLIRP-211ENST00000557623 MN1Q10571 1320 aaPredicted RBP12.19□□□□□ -0.46
SLIRP-211ENST00000557623 PRAMEF33A0A0G2JMD5 474 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 A0A1W2PNU3 283 aaPredicted RBP12.19□□□□□ -0.46
SLIRP-211ENST00000557623 UBA6A0AVT1 1052 aaPredicted RBP12.19□□□□□ -0.46
SLIRP-211ENST00000557623 FAM187AA6NFU0 413 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 EFCAB8A8MWE9 144 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 TAF4O00268 1085 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 KPNA5O15131 536 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 TNFSF15O95150 251 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 TTC4O95801 387 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 TYRP1P17643 537 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 PGAM1P18669 254 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 CSTF2P33240 577 aaKnown RBP eCLIP12.19□□□□□ -0.461e-6■□□□□ 10.6
SLIRP-211ENST00000557623 CAPZBP47756 277 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 ARCN1P48444 511 aaKnown RBP12.19□□□□□ -0.46
SLIRP-211ENST00000557623 CKAP4Q07065 602 aaKnown RBP12.19□□□□□ -0.46
SLIRP-211ENST00000557623 BOP1Q14137 746 aaKnown RBP12.19□□□□□ -0.46
SLIRP-211ENST00000557623 C16orf72Q14CZ0 275 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 TMED2Q15363 201 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 LONRF1Q17RB8 773 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 TYSND1Q2T9J0 566 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 PTRHD1Q6GMV3 140 aaKnown RBP12.19□□□□□ -0.46
SLIRP-211ENST00000557623 NEPROQ6NW34 567 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 PDZD3Q86UT5 571 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 PDIK1LQ8N165 341 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 ACVR1CQ8NER5 493 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 CALML6Q8TD86 181 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 ASZ1Q8WWH4 475 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 ZDHHC12Q96GR4 267 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 C16orf45Q96MC5 204 aaPredicted RBP12.19□□□□□ -0.46
SLIRP-211ENST00000557623 FERD3LQ96RJ6 166 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 TRIM51Q9BSJ1 452 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 SLC6A16Q9GZN6 736 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 KIR3DX1Q9H7L2 352 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 MVB12BQ9H7P6 319 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 ASCL3Q9NQ33 180 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 INTS10Q9NVR2 710 aaKnown RBP12.19□□□□□ -0.46
SLIRP-211ENST00000557623 OGFRQ9NZT2 677 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 TMEM9Q9P0T7 183 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 EPHA6Q9UF33 1036 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 PISDQ9UG56 409 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 FAM169AQ9Y6X4 670 aa12.19□□□□□ -0.46
SLIRP-211ENST00000557623 ZCWPW2A0A1B0GU75 182 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 SLC5A10A0PJK1 596 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 SRRM3A6NNA2 597 aaPredicted RBP12.18□□□□□ -0.46
SLIRP-211ENST00000557623 CDRT15L2A8MXV6 281 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 GOLGA8KD6RF30 607 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 H3BMM5 538 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 GOLGA8TH3BQL2 631 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 KIF2AO00139 706 aaPredicted RBP12.18□□□□□ -0.46
SLIRP-211ENST00000557623 TOX3O15405 576 aaPredicted RBP12.18□□□□□ -0.46
SLIRP-211ENST00000557623 RRP8O43159 456 aaKnown RBP12.18□□□□□ -0.46
SLIRP-211ENST00000557623 SEC31AO94979 1220 aaKnown RBP12.18□□□□□ -0.46
SLIRP-211ENST00000557623 C9P02748 559 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 APOA4P06727 396 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 ANKRD34CP0C6C1 535 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 MPSTP25325 297 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 PDHA2P29803 388 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 PREPP48147 710 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 ITGA8P53708 1063 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 ADARP55265 1226 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms