RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 RFWD3Q6PCD5 774 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 PSRC1Q6PGN9 363 aaPredicted RBP4.45□□□□□ -1.7
SRP54-212ENST00000556992 CES3Q6UWW8 571 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 TRPM8Q7Z2W7 1104 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 KDELC2Q7Z4H8 507 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 TMCO2Q7Z6W1 182 aaPredicted RBP4.45□□□□□ -1.7
SRP54-212ENST00000556992 SDCCAG8Q86SQ7 713 aaPredicted RBP4.45□□□□□ -1.7
SRP54-212ENST00000556992 SRLQ86TD4 932 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 KCNMB4Q86W47 210 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 CNTN4Q8IWV2 1026 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 UNC5BQ8IZJ1 945 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.45□□□□□ -1.7
SRP54-212ENST00000556992 CCDC63Q8NA47 563 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 LEMD2Q8NC56 503 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 HJURPQ8NCD3 748 aaPredicted RBP4.45□□□□□ -1.7
SRP54-212ENST00000556992 PPP1R14CQ8TAE6 165 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 BRSK1Q8TDC3 778 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 PPM1EQ8WY54 764 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 CCT6BQ92526 530 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 USP13Q92995 863 aaPredicted RBP4.45□□□□□ -1.7
SRP54-212ENST00000556992 MFSD3Q96ES6 412 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 FEM1CQ96JP0 617 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 TSNARE1Q96NA8 513 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 KLHL5Q96PQ7 755 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 FAM111AQ96PZ2 611 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 GCNAQ96QF7 691 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 CYP2S1Q96SQ9 504 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 RBBP8Q99708 897 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 SEMA3CQ99985 751 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 APOL2Q9BQE5 337 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 SIKE1Q9BRV8 207 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 ADGRE3Q9BY15 652 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 ACE2Q9BYF1 805 aaPredicted RBP4.45□□□□□ -1.7
SRP54-212ENST00000556992 ZBP1Q9H171 429 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 MTIF3Q9H2K0 278 aaKnown RBP4.45□□□□□ -1.7
SRP54-212ENST00000556992 POFUT1Q9H488 388 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 UGT1A7Q9HAW7 530 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 UGT1A10Q9HAW8 530 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 UGT1A8Q9HAW9 530 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 IARS2Q9NSE4 1012 aaKnown RBP4.45□□□□□ -1.7
SRP54-212ENST00000556992 THAP1Q9NVV9 213 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 PIH1D1Q9NWS0 290 aaKnown RBP4.45□□□□□ -1.7
SRP54-212ENST00000556992 SIRPGQ9P1W8 387 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 SLC17A7Q9P2U7 560 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 UBA2Q9UBT2 640 aaPredicted RBP4.45□□□□□ -1.7
SRP54-212ENST00000556992 PRDM4Q9UKN5 801 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 RIMKLBQ9ULI2 386 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 ANKRD6Q9Y2G4 727 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 MTO1Q9Y2Z2 717 aaKnown RBP4.45□□□□□ -1.7
SRP54-212ENST00000556992 ACOT9Q9Y305 439 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 TNPO3Q9Y5L0 923 aaKnown RBP4.45□□□□□ -1.7
SRP54-212ENST00000556992 USH1CQ9Y6N9 552 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 CACNA1AO00555 2505 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 PLXNA1Q9UIW2 1896 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 TRPM7Q96QT4 1865 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 A0A096LPK6 155 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 A0A0D9SEW6 157 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 E2F8A0AVK6 867 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 C2orf81A6NN90 581 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 CBX4O00257 560 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 TPP1O14773 563 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 TRIM24O15164 1050 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 PFDN6O15212 129 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 INSIG1O15503 277 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 TSPAN3O60637 253 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 PLIN3O60664 434 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 TBL1XO60907 577 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 SNUPNO95149 360 aaKnown RBP4.44□□□□□ -1.7
SRP54-212ENST00000556992 NDST3O95803 873 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 OLFM2O95897 454 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 GLUD1P00367 558 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 AHSGP02765 367 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 ALDOAP04075 364 aaKnown RBP4.44□□□□□ -1.7
SRP54-212ENST00000556992 FGF1P05230 155 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 ATP5BP06576 529 aaKnown RBP4.44□□□□□ -1.7
SRP54-212ENST00000556992 BPGMP07738 259 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 MMP2P08253 660 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 HNRNPA1P09651 372 aaKnown RBP eCLIP4.44□□□□□ -1.7
SRP54-212ENST00000556992 SPATA31D3P0C874 917 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 PTPN2P17706 415 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 DDX6P26196 483 aaKnown RBP eCLIP4.44□□□□□ -1.7
SRP54-212ENST00000556992 GABRR2P28476 465 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 CA8P35219 290 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 SLC26A3P40879 764 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 MAGEA9P43362 315 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 MAGEA12P43365 314 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 CSNK1DP48730 415 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 RASSF2P50749 326 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 PRKAA2P54646 552 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 SLC12A2P55011 1212 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 RPL26P61254 145 aaKnown RBP4.44□□□□□ -1.7
SRP54-212ENST00000556992 RPS24P62847 133 aaKnown RBP4.44□□□□□ -1.7
SRP54-212ENST00000556992 TMPRSS15P98073 1019 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 DSC2Q02487 901 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 ACTN3Q08043 901 aaPredicted RBP4.44□□□□□ -1.7
SRP54-212ENST00000556992 CCDC15Q0P6D6 951 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 ASPHQ12797 758 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 OLIG2Q13516 323 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 SLC12A1Q13621 1099 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 PDE1CQ14123 709 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms