RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 G6PDP11413 515 aa23.82■■□□□ 1.4
TMEM260-207ENST00000555497 HSD17B1P14061 328 aa23.82■■□□□ 1.4
TMEM260-207ENST00000555497 HMOX2P30519 316 aa23.82■■□□□ 1.4
TMEM260-207ENST00000555497 SLC7A1P30825 629 aa23.82■■□□□ 1.4
TMEM260-207ENST00000555497 GRIA3P42263 894 aa23.82■■□□□ 1.4
TMEM260-207ENST00000555497 EMX2Q04743 252 aa23.82■■□□□ 1.4
TMEM260-207ENST00000555497 TTLL9Q3SXZ7 439 aa23.82■■□□□ 1.4
TMEM260-207ENST00000555497 GRASPQ7Z6J2 395 aaPredicted RBP23.82■■□□□ 1.4
TMEM260-207ENST00000555497 KIAA0907Q7Z7F0 614 aaPredicted RBP23.82■■□□□ 1.4
TMEM260-207ENST00000555497 RNF11Q9Y3C5 154 aa23.82■■□□□ 1.4
TMEM260-207ENST00000555497 FAM234BA2RU67 622 aa23.82■■□□□ 1.4
TMEM260-207ENST00000555497 TLL1O43897 1013 aa23.82■■□□□ 1.4
TMEM260-207ENST00000555497 MTX2O75431 263 aa23.82■■□□□ 1.4
TMEM260-207ENST00000555497 ZXDCQ2QGD7 858 aaPredicted RBP23.82■■□□□ 1.4
TMEM260-207ENST00000555497 AP5B1Q2VPB7 878 aa23.82■■□□□ 1.4
TMEM260-207ENST00000555497 PLA2G4EQ3MJ16 856 aa23.82■■□□□ 1.4
TMEM260-207ENST00000555497 HMBOX1Q6NT76 420 aa23.82■■□□□ 1.4
TMEM260-207ENST00000555497 HSD11B1LQ7Z5J1 315 aa23.82■■□□□ 1.4
TMEM260-207ENST00000555497 VRK3Q8IV63 474 aa23.82■■□□□ 1.4
TMEM260-207ENST00000555497 GALNT4Q8N4A0 578 aa23.82■■□□□ 1.4
TMEM260-207ENST00000555497 SCAMP4Q969E2 229 aa23.82■■□□□ 1.4
TMEM260-207ENST00000555497 LRRC3BQ96PB8 259 aa23.82■■□□□ 1.4
TMEM260-207ENST00000555497 ANGPTL3Q9Y5C1 460 aa23.82■■□□□ 1.4
TMEM260-207ENST00000555497 K7EPI3 171 aa23.81■■□□□ 1.4
TMEM260-207ENST00000555497 RSL1D1O76021 490 aaKnown RBP23.81■■□□□ 1.4
TMEM260-207ENST00000555497 AOAHP28039 575 aa23.81■■□□□ 1.4
TMEM260-207ENST00000555497 WEE1P30291 646 aa23.81■■□□□ 1.4
TMEM260-207ENST00000555497 FOXM1Q08050 763 aa23.81■■□□□ 1.4
TMEM260-207ENST00000555497 PDK3Q15120 406 aa23.81■■□□□ 1.4
TMEM260-207ENST00000555497 ZFAND4Q86XD8 727 aa23.81■■□□□ 1.4
TMEM260-207ENST00000555497 KIAA2013Q8IYS2 634 aa23.81■■□□□ 1.4
TMEM260-207ENST00000555497 OR2T34Q8NGX1 318 aa23.81■■□□□ 1.4
TMEM260-207ENST00000555497 OR2T3Q8NH03 318 aa23.81■■□□□ 1.4
TMEM260-207ENST00000555497 CANT1Q8WVQ1 401 aa23.81■■□□□ 1.4
TMEM260-207ENST00000555497 SLC24A3Q9HC58 644 aa23.81■■□□□ 1.4
TMEM260-207ENST00000555497 CNOT6Q9ULM6 557 aaKnown RBP23.81■■□□□ 1.4
TMEM260-207ENST00000555497 PDE10AQ9Y233 779 aa23.81■■□□□ 1.4
TMEM260-207ENST00000555497 LOC730098B7Z3J9 87 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 ANKRD28O15084 1053 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 LEFTY1O75610 366 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 ARHGEF15O94989 841 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 CBSLP0DN79 551 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 HSPA8P11142 646 aaKnown RBP23.8■■□□□ 1.4
TMEM260-207ENST00000555497 CBSP35520 551 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 PPIGQ13427 754 aaKnown RBP eCLIP23.8■■□□□ 1.4
TMEM260-207ENST00000555497 ARHGEF7Q14155 803 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 DMC1Q14565 340 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 CYP20A1Q6UW02 462 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 SERPINA13PQ6UXR4 307 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 EP400NLQ6ZTU2 488 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 SPPL2CQ8IUH8 684 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 ZUFSPQ96AP4 578 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 SPATA16Q9BXB7 569 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 INTS7Q9NVH2 962 aaKnown RBP23.8■■□□□ 1.4
TMEM260-207ENST00000555497 TBC1D14Q9P2M4 693 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 LEF1Q9UJU2 399 aaPredicted RBP23.8■■□□□ 1.4
TMEM260-207ENST00000555497 POLR3HQ9Y535 204 aaPredicted RBP23.8■■□□□ 1.4
TMEM260-207ENST00000555497 CTSLP07711 333 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 CEBPBP17676 345 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 CASP2P42575 452 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 CDKL1Q00532 357 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 FPGSQ05932 587 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 CRY1Q16526 586 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 ARSIQ5FYB1 569 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 SLC2A7Q6PXP3 512 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 AMIGO2Q86SJ2 522 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 CATSPER1Q8NEC5 780 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 TMEM74Q96NL1 305 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 UHRF1Q96T88 793 aaPredicted RBP23.8■■□□□ 1.4
TMEM260-207ENST00000555497 HEPHQ9BQS7 1158 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 TRIM54Q9BYV2 358 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 SUN2Q9UH99 717 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 PCDHGB4Q9UN71 923 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 PCDHGB5Q9Y5G0 923 aa23.8■■□□□ 1.4
TMEM260-207ENST00000555497 DENRO43583 198 aaKnown RBP23.79■■□□□ 1.4
TMEM260-207ENST00000555497 ZNF26P17031 533 aaPredicted RBP23.79■■□□□ 1.4
TMEM260-207ENST00000555497 EPORP19235 508 aa23.79■■□□□ 1.4
TMEM260-207ENST00000555497 POLR2EP19388 210 aaKnown RBP23.79■■□□□ 1.4
TMEM260-207ENST00000555497 POLR2LP62875 67 aaKnown RBP23.79■■□□□ 1.4
TMEM260-207ENST00000555497 HSPA14Q0VDF9 509 aa23.79■■□□□ 1.4
TMEM260-207ENST00000555497 GBX1Q14549 363 aa23.79■■□□□ 1.4
TMEM260-207ENST00000555497 RNF220Q5VTB9 566 aa23.79■■□□□ 1.4
TMEM260-207ENST00000555497 UGT2A3Q6UWM9 527 aa23.79■■□□□ 1.4
TMEM260-207ENST00000555497 ULK4Q96C45 1275 aa23.79■■□□□ 1.4
TMEM260-207ENST00000555497 KLHL42Q9P2K6 505 aa23.79■■□□□ 1.4
TMEM260-207ENST00000555497 SNX13Q9Y5W8 968 aa23.79■■□□□ 1.4
TMEM260-207ENST00000555497 OR56A5P0C7T3 313 aa23.79■■□□□ 1.4
TMEM260-207ENST00000555497 PIM1P11309 404 aaPredicted RBP23.79■■□□□ 1.4
TMEM260-207ENST00000555497 TIMP2P16035 220 aa23.79■■□□□ 1.4
TMEM260-207ENST00000555497 RECQLP46063 649 aaPredicted RBP23.79■■□□□ 1.4
TMEM260-207ENST00000555497 RPIAP49247 311 aa23.79■■□□□ 1.4
TMEM260-207ENST00000555497 BRAT1Q6PJG6 821 aa23.79■■□□□ 1.4
TMEM260-207ENST00000555497 Q6ZVL8 140 aa23.79■■□□□ 1.4
TMEM260-207ENST00000555497 PLPP6Q8IY26 295 aa23.79■■□□□ 1.4
TMEM260-207ENST00000555497 NTMT1Q9BV86 223 aa23.79■■□□□ 1.4
TMEM260-207ENST00000555497 KLQ9UEF7 1012 aa23.79■■□□□ 1.4
TMEM260-207ENST00000555497 KRT87PA6NCN2 255 aa23.78■■□□□ 1.4
TMEM260-207ENST00000555497 PER2O15055 1255 aa23.78■■□□□ 1.4
TMEM260-207ENST00000555497 TIPRLO75663 272 aa23.78■■□□□ 1.4
TMEM260-207ENST00000555497 STK16O75716 305 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms