RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 SLC5A10A0PJK1 596 aa13.33□□□□□ -0.28
SNX6-203ENST00000555416 CD3EAPO15446 510 aaKnown RBP13.33□□□□□ -0.28
SNX6-203ENST00000555416 EFSO43281 561 aa13.33□□□□□ -0.28
SNX6-203ENST00000555416 IVDP26440 423 aa13.33□□□□□ -0.28
SNX6-203ENST00000555416 MAGEA3P43357 314 aa13.33□□□□□ -0.28
SNX6-203ENST00000555416 SH3BP2P78314 561 aa13.33□□□□□ -0.28
SNX6-203ENST00000555416 RNASEH2BQ5TBB1 312 aaKnown RBP13.33□□□□□ -0.28
SNX6-203ENST00000555416 ANKS6Q68DC2 871 aa13.33□□□□□ -0.28
SNX6-203ENST00000555416 IRGCQ6NXR0 463 aa13.33□□□□□ -0.28
SNX6-203ENST00000555416 CERS6Q6ZMG9 384 aa13.33□□□□□ -0.28
SNX6-203ENST00000555416 LRRC69Q6ZNQ3 347 aa13.33□□□□□ -0.28
SNX6-203ENST00000555416 PDZD3Q86UT5 571 aa13.33□□□□□ -0.28
SNX6-203ENST00000555416 VRK3Q8IV63 474 aa13.33□□□□□ -0.28
SNX6-203ENST00000555416 KRT222Q8N1A0 295 aa13.33□□□□□ -0.28
SNX6-203ENST00000555416 MCUQ8NE86 351 aa13.33□□□□□ -0.28
SNX6-203ENST00000555416 ELMO1Q92556 727 aa13.33□□□□□ -0.28
SNX6-203ENST00000555416 SERPINB12Q96P63 405 aa13.33□□□□□ -0.28
SNX6-203ENST00000555416 PRORYQ9H606 182 aa13.33□□□□□ -0.28
SNX6-203ENST00000555416 MRM3Q9HC36 420 aaKnown RBP13.33□□□□□ -0.28
SNX6-203ENST00000555416 CPNE5Q9HCH3 593 aa13.33□□□□□ -0.28
SNX6-203ENST00000555416 CATSPERZQ9NTU4 200 aa13.33□□□□□ -0.28
SNX6-203ENST00000555416 SIDT1Q9NXL6 827 aaKnown RBP13.33□□□□□ -0.28
SNX6-203ENST00000555416 SLC39A1Q9NY26 324 aa13.33□□□□□ -0.28
SNX6-203ENST00000555416 AKAP7Q9P0M2 348 aaPredicted RBP13.33□□□□□ -0.28
SNX6-203ENST00000555416 EPHA6Q9UF33 1036 aa13.33□□□□□ -0.28
SNX6-203ENST00000555416 ACSL6Q9UKU0 697 aa13.33□□□□□ -0.28
SNX6-203ENST00000555416 IGHV5-51A0A0C4DH38 117 aa13.32□□□□□ -0.28
SNX6-203ENST00000555416 GOLGA6L10A0A0M3HER8 536 aa13.32□□□□□ -0.28
SNX6-203ENST00000555416 OR6C74A6NCV1 312 aa13.32□□□□□ -0.28
SNX6-203ENST00000555416 BANF1O75531 89 aa13.32□□□□□ -0.28
SNX6-203ENST00000555416 ANKRD34CP0C6C1 535 aa13.32□□□□□ -0.28
SNX6-203ENST00000555416 TPBGLP0DKB5 382 aa13.32□□□□□ -0.28
SNX6-203ENST00000555416 ACADLP28330 430 aa13.32□□□□□ -0.28
SNX6-203ENST00000555416 CCR7P32248 378 aa13.32□□□□□ -0.28
SNX6-203ENST00000555416 SEPHS1P49903 392 aa13.32□□□□□ -0.28
SNX6-203ENST00000555416 CSE1LP55060 971 aaKnown RBP13.32□□□□□ -0.28
SNX6-203ENST00000555416 MC2RQ01718 297 aa13.32□□□□□ -0.28
SNX6-203ENST00000555416 BOP1Q14137 746 aaKnown RBP13.32□□□□□ -0.28
SNX6-203ENST00000555416 PLCL1Q15111 1095 aa13.32□□□□□ -0.28
SNX6-203ENST00000555416 ZNF789Q5FWF6 425 aa13.32□□□□□ -0.28
SNX6-203ENST00000555416 LYPLAL1Q5VWZ2 237 aa13.32□□□□□ -0.28
SNX6-203ENST00000555416 FBXO38Q6PIJ6 1188 aa13.32□□□□□ -0.28
SNX6-203ENST00000555416 KLHL7Q8IXQ5 586 aa13.32□□□□□ -0.28
SNX6-203ENST00000555416 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.32□□□□□ -0.283e-7■■■■■ 43.2
SNX6-203ENST00000555416 TAAR9Q96RI9 348 aa13.32□□□□□ -0.28
SNX6-203ENST00000555416 FERD3LQ96RJ6 166 aa13.32□□□□□ -0.28
SNX6-203ENST00000555416 P2RY12Q9H244 342 aa13.32□□□□□ -0.28
SNX6-203ENST00000555416 XKR8Q9H6D3 395 aa13.32□□□□□ -0.28
SNX6-203ENST00000555416 PCYOX1Q9UHG3 505 aa13.32□□□□□ -0.28
SNX6-203ENST00000555416 CDYLQ9Y232 598 aa13.32□□□□□ -0.28
SNX6-203ENST00000555416 SAR1BQ9Y6B6 198 aa13.32□□□□□ -0.28
SNX6-203ENST00000555416 IGSF10Q6WRI0 2623 aa13.32□□□□□ -0.28
SNX6-203ENST00000555416 FAM208BQ5VWN6 2430 aa13.32□□□□□ -0.28
SNX6-203ENST00000555416 ZCWPW2A0A1B0GU75 182 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 CTAGE9A4FU28 777 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 OR5K3A6NET4 321 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 B4E171 279 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 AP3B1O00203 1094 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 FTH1P02794 183 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 OR56A5P0C7T3 313 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 MLNP12872 115 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 WT1P19544 449 aaPredicted RBP13.31□□□□□ -0.28
SNX6-203ENST00000555416 TSPAN7P41732 249 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 RPA4Q13156 261 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 PRKG2Q13237 762 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 PTK6Q13882 451 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 PPP1R7Q15435 360 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 ANKRD20A4Q4UJ75 823 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 MSS51Q4VC12 460 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 CTSL3PQ5NE16 218 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 CACHD1Q5VU97 1274 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 CASC4Q6P4E1 433 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 PRSS42Q7Z5A4 293 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 VASH2Q86V25 355 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 DTX1Q86Y01 620 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 PPIL6Q8IXY8 311 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 OR4E2Q8NGC2 313 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 OR5AR1Q8NGP9 310 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 GRK7Q8WTQ7 553 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 KLHL6Q8WZ60 621 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 TFGQ92734 400 aaPredicted RBP13.31□□□□□ -0.28
SNX6-203ENST00000555416 SLCO2A1Q92959 643 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 SIGLEC10Q96LC7 697 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 PWWP2AQ96N64 755 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 MAP3K3Q99759 626 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 TRIM51Q9BSJ1 452 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 HGH1Q9BTY7 390 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 DPH1Q9BZG8 443 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 SPRY4Q9C004 299 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 RAB33BQ9H082 229 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 VPS37BQ9H9H4 285 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 KCND1Q9NSA2 647 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 PCDHGA3Q9Y5H0 932 aa13.31□□□□□ -0.28
SNX6-203ENST00000555416 FAM237BA0A1B0GVD1 139 aa13.3□□□□□ -0.28
SNX6-203ENST00000555416 SDR42E2A6NKP2 422 aa13.3□□□□□ -0.28
SNX6-203ENST00000555416 BTN3A3O00478 584 aa13.3□□□□□ -0.28
SNX6-203ENST00000555416 DNALI1O14645 258 aaPredicted RBP13.3□□□□□ -0.28
SNX6-203ENST00000555416 PRMT5O14744 637 aaPredicted RBP13.3□□□□□ -0.28
SNX6-203ENST00000555416 LIN7AO14910 233 aaPredicted RBP13.3□□□□□ -0.28
SNX6-203ENST00000555416 RASSF9O75901 435 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms