RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 STAMBPL1Q96FJ0 436 aa11.82□□□□□ -0.52
SRP54-206ENST00000555317 C16orf45Q96MC5 204 aaPredicted RBP11.82□□□□□ -0.52
SRP54-206ENST00000555317 TGM7Q96PF1 710 aa11.82□□□□□ -0.52
SRP54-206ENST00000555317 PANX3Q96QZ0 392 aa11.82□□□□□ -0.52
SRP54-206ENST00000555317 FERD3LQ96RJ6 166 aa11.82□□□□□ -0.52
SRP54-206ENST00000555317 INSM2Q96T92 566 aaPredicted RBP11.82□□□□□ -0.52
SRP54-206ENST00000555317 KRT12Q99456 494 aa11.82□□□□□ -0.52
SRP54-206ENST00000555317 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.82□□□□□ -0.52
SRP54-206ENST00000555317 TMEM9Q9P0T7 183 aa11.82□□□□□ -0.52
SRP54-206ENST00000555317 MARCH4Q9P2E8 410 aaPredicted RBP11.82□□□□□ -0.52
SRP54-206ENST00000555317 PRSS21Q9Y6M0 314 aa11.82□□□□□ -0.52
SRP54-206ENST00000555317 CELSR3Q9NYQ7 3312 aa11.82□□□□□ -0.52
SRP54-206ENST00000555317 ITPR1Q14643 2758 aa11.82□□□□□ -0.52
SRP54-206ENST00000555317 PRAMEF33A0A0G2JMD5 474 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 A0A1W2PNU3 283 aaPredicted RBP11.81□□□□□ -0.52
SRP54-206ENST00000555317 PMS2P1A4D2B8 440 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 GOLGA8KD6RF30 607 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 GOLGA8TH3BQL2 631 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 TAF4O00268 1085 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 CAPN5O15484 640 aaPredicted RBP11.81□□□□□ -0.52
SRP54-206ENST00000555317 TTI1O43156 1089 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 KDM1AO60341 852 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 PGAM1P18669 254 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 OGNP20774 298 aaKnown RBP11.81□□□□□ -0.52
SRP54-206ENST00000555317 PTGIRP43119 386 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 CSE1LP55060 971 aaKnown RBP11.81□□□□□ -0.52
SRP54-206ENST00000555317 CFHR1Q03591 330 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 PRKAA1Q13131 559 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 SEMA3AQ14563 771 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 LONRF1Q17RB8 773 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 BBS9Q3SYG4 887 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 ANKRD20A4Q4UJ75 823 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 ZNF470Q6ECI4 717 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 NEPROQ6NW34 567 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 MAATS1Q7Z4T9 603 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 OOSP2Q86WS3 158 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 PDIK1LQ8N165 341 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 CALML6Q8TD86 181 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 KCNE4Q8WWG9 221 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 ASZ1Q8WWH4 475 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 LCN9Q8WX39 176 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 JPH3Q8WXH2 748 aaPredicted RBP11.81□□□□□ -0.52
SRP54-206ENST00000555317 SNF8Q96H20 258 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 TCF12Q99081 682 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 TRIM51Q9BSJ1 452 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 TRIM31Q9BZY9 425 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 OR52A5Q9H2C5 316 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 KIR3DX1Q9H7L2 352 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 MVB12BQ9H7P6 319 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 ASCL3Q9NQ33 180 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 CHD6Q8TD26 2715 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 MN1Q10571 1320 aaPredicted RBP11.81□□□□□ -0.52
SRP54-206ENST00000555317 ZFYVE26Q68DK2 2539 aa11.81□□□□□ -0.52
SRP54-206ENST00000555317 FAM208BQ5VWN6 2430 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 EFCAB7A8K855 629 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 EFCAB8A8MWE9 144 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 H3BMM5 538 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 KPNA5O15131 536 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 TLX3O43711 291 aaPredicted RBP11.8□□□□□ -0.52
SRP54-206ENST00000555317 USP1O94782 785 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 TTC4O95801 387 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 RPN2P04844 631 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 ITIH1P19827 911 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 RPS3P23396 243 aaKnown RBP eCLIP11.8□□□□□ -0.528e-6■■□□□ 12.6
SRP54-206ENST00000555317 PDHA2P29803 388 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 MAGEA3P43357 314 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 ABCG1P45844 678 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 ARL4DP49703 201 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 GFERP55789 205 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 ARL4CP56559 192 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 RAB15P59190 212 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 CKAP4Q07065 602 aaKnown RBP11.8□□□□□ -0.52
SRP54-206ENST00000555317 HSPA14Q0VDF9 509 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 DNTTIP2Q5QJE6 756 aaKnown RBP11.8□□□□□ -0.52
SRP54-206ENST00000555317 BROXQ5VW32 411 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 CAPRIN2Q6IMN6 1127 aaKnown RBP11.8□□□□□ -0.52
SRP54-206ENST00000555317 FAM92BQ6ZTR7 304 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 OTOAQ7RTW8 1153 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 CLEC14AQ86T13 490 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.8□□□□□ -0.52
SRP54-206ENST00000555317 BBOF1Q8ND07 529 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 ACVR1CQ8NER5 493 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 SKA2Q8WVK7 121 aaPredicted RBP11.8□□□□□ -0.52
SRP54-206ENST00000555317 RSC1A1Q92681 617 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 TFGQ92734 400 aaPredicted RBP11.8□□□□□ -0.52
SRP54-206ENST00000555317 NAF1Q96HR8 494 aaKnown RBP11.8□□□□□ -0.52
SRP54-206ENST00000555317 C9orf72Q96LT7 481 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 TAAR9Q96RI9 348 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 FAM167BQ9BTA0 163 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 NAT9Q9BTE0 207 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 HGH1Q9BTY7 390 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 CARD6Q9BX69 1037 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 CCDC68Q9H2F9 335 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 TRIT1Q9H3H1 467 aaKnown RBP11.8□□□□□ -0.52
SRP54-206ENST00000555317 SRMSQ9H3Y6 488 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 C20orf96Q9NUD7 363 aaPredicted RBP11.8□□□□□ -0.52
SRP54-206ENST00000555317 SLC39A1Q9NY26 324 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 PDP2Q9P2J9 529 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 SLC24A2Q9UI40 661 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 ASF1AQ9Y294 204 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms