RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 NTRK2Q16620 822 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 CCNYL2Q5T2Q4 361 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 GCNT6Q5T4J0 391 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 Q6ZTC4 211 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 KRT74Q7RTS7 529 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 HAUS6Q7Z4H7 955 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 LDB1Q86U70 411 aaPredicted RBP4.76□□□□□ -1.65
SCFD1-211ENST00000554437 MCUQ8NE86 351 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 STAMBPL1Q96FJ0 436 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 SPATA17Q96L03 361 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 FAM81BQ96LP2 452 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 ZNF354BQ96LW1 612 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 C17orf77Q96MU5 243 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 ZNF582Q96NG8 517 aaPredicted RBP4.76□□□□□ -1.65
SCFD1-211ENST00000554437 ADPGKQ9BRR6 497 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 TXLNGYQ9BZA5 131 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 SPATC1LQ9H0A9 340 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 PPIL3Q9H2H8 161 aaKnown RBP4.76□□□□□ -1.65
SCFD1-211ENST00000554437 MBNL1Q9NR56 388 aaKnown RBP4.76□□□□□ -1.65
SCFD1-211ENST00000554437 TXLNGQ9NUQ3 528 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 GIMAP4Q9NUV9 329 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 PTTG2Q9NZH5 202 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 RPS6KA6Q9UK32 745 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 ZHX1Q9UKY1 873 aaPredicted RBP4.76□□□□□ -1.65
SCFD1-211ENST00000554437 TCF20Q9UGU0 1960 aaKnown RBP4.76□□□□□ -1.65
SCFD1-211ENST00000554437 ADAMDEC1O15204 470 aa4.75□□□□□ -1.65
SCFD1-211ENST00000554437 SYNCRIPO60506 623 aaKnown RBP4.75□□□□□ -1.65
SCFD1-211ENST00000554437 VPREB1P12018 145 aa4.75□□□□□ -1.65
SCFD1-211ENST00000554437 TRIM21P19474 475 aaKnown RBP4.75□□□□□ -1.65
SCFD1-211ENST00000554437 MUTP22033 750 aa4.75□□□□□ -1.65
SCFD1-211ENST00000554437 PSMA3P25788 255 aa4.75□□□□□ -1.65
SCFD1-211ENST00000554437 STAT2P52630 851 aa4.75□□□□□ -1.65
SCFD1-211ENST00000554437 KRTAP10-6P60371 365 aaPredicted RBP4.75□□□□□ -1.65
SCFD1-211ENST00000554437 MELKQ14680 651 aa4.75□□□□□ -1.65
SCFD1-211ENST00000554437 KRT79Q5XKE5 535 aa4.75□□□□□ -1.65
SCFD1-211ENST00000554437 FAM109BQ6ICB4 259 aaPredicted RBP4.75□□□□□ -1.65
SCFD1-211ENST00000554437 KLC3Q6P597 504 aa4.75□□□□□ -1.65
SCFD1-211ENST00000554437 MARK2Q7KZI7 788 aaKnown RBP4.75□□□□□ -1.65
SCFD1-211ENST00000554437 APPL2Q8NEU8 664 aa4.75□□□□□ -1.65
SCFD1-211ENST00000554437 SLC22A18Q96BI1 424 aa4.75□□□□□ -1.65
SCFD1-211ENST00000554437 PRMT6Q96LA8 375 aaPredicted RBP4.75□□□□□ -1.65
SCFD1-211ENST00000554437 CDRT15Q96T59 188 aa4.75□□□□□ -1.65
SCFD1-211ENST00000554437 MYCBPQ99417 103 aaPredicted RBP4.75□□□□□ -1.65
SCFD1-211ENST00000554437 KCNK15Q9H427 330 aa4.75□□□□□ -1.65
SCFD1-211ENST00000554437 SLA2Q9H6Q3 261 aa4.75□□□□□ -1.65
SCFD1-211ENST00000554437 ZWILCHQ9H900 591 aa4.75□□□□□ -1.65
SCFD1-211ENST00000554437 DBNDD1Q9H9R9 158 aa4.75□□□□□ -1.65
SCFD1-211ENST00000554437 APOBEC3GQ9HC16 384 aaKnown RBP4.75□□□□□ -1.65
SCFD1-211ENST00000554437 HHATLQ9HCP6 504 aa4.75□□□□□ -1.65
SCFD1-211ENST00000554437 PDE7BQ9NP56 450 aa4.75□□□□□ -1.65
SCFD1-211ENST00000554437 MRPL15Q9P015 296 aaKnown RBP4.75□□□□□ -1.65
SCFD1-211ENST00000554437 SNX8Q9Y5X2 465 aa4.75□□□□□ -1.65
SCFD1-211ENST00000554437 LOC100509620A0A075B734 347 aa4.74□□□□□ -1.65
SCFD1-211ENST00000554437 TEX13DA0A0J9YY54 714 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-211ENST00000554437 LINC01565O15544 149 aa4.74□□□□□ -1.65
SCFD1-211ENST00000554437 GRID2O43424 1007 aa4.74□□□□□ -1.65
SCFD1-211ENST00000554437 SSX4O60224 188 aa4.74□□□□□ -1.65
SCFD1-211ENST00000554437 PRKNO60260 465 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-211ENST00000554437 HSPA4LO95757 839 aa4.74□□□□□ -1.65
SCFD1-211ENST00000554437 CAVIN2O95810 425 aa4.74□□□□□ -1.65
SCFD1-211ENST00000554437 LDLRP01130 860 aa4.74□□□□□ -1.65
SCFD1-211ENST00000554437 PAX1P15863 534 aa4.74□□□□□ -1.65
SCFD1-211ENST00000554437 CKMT2P17540 419 aa4.74□□□□□ -1.65
SCFD1-211ENST00000554437 LINC01547P58512 204 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-211ENST00000554437 PRKAA1Q13131 559 aa4.74□□□□□ -1.65
SCFD1-211ENST00000554437 DMP1Q13316 513 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-211ENST00000554437 PPP2R5CQ13362 524 aa4.74□□□□□ -1.65
SCFD1-211ENST00000554437 BECN1Q14457 450 aa4.74□□□□□ -1.65
SCFD1-211ENST00000554437 C15orf59Q2T9L4 293 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-211ENST00000554437 SLC27A1Q6PCB7 646 aa4.74□□□□□ -1.65
SCFD1-211ENST00000554437 ZNF329Q86UD4 541 aa4.74□□□□□ -1.65
SCFD1-211ENST00000554437 LINC00346Q8IVM7 164 aa4.74□□□□□ -1.65
SCFD1-211ENST00000554437 LMNTD2Q8IXW0 634 aa4.74□□□□□ -1.65
SCFD1-211ENST00000554437 MSANTD4Q8NCY6 345 aa4.74□□□□□ -1.65
SCFD1-211ENST00000554437 WDR20Q8TBZ3 569 aa4.74□□□□□ -1.65
SCFD1-211ENST00000554437 PRPF31Q8WWY3 499 aaKnown RBP4.74□□□□□ -1.65
SCFD1-211ENST00000554437 ERLEC1Q96DZ1 483 aa4.74□□□□□ -1.65
SCFD1-211ENST00000554437 HES6Q96HZ4 224 aa4.74□□□□□ -1.65
SCFD1-211ENST00000554437 VPS33BQ9H267 617 aa4.74□□□□□ -1.65
SCFD1-211ENST00000554437 PRSS51A0A1B0GVH4 220 aa4.73□□□□□ -1.65
SCFD1-211ENST00000554437 TO15178 435 aa4.73□□□□□ -1.65
SCFD1-211ENST00000554437 NR3C1P04150 777 aa4.73□□□□□ -1.65
SCFD1-211ENST00000554437 H1F0P07305 194 aaKnown RBP4.73□□□□□ -1.65
SCFD1-211ENST00000554437 SP1P08047 785 aa4.73□□□□□ -1.65
SCFD1-211ENST00000554437 GJA1P17302 382 aa4.73□□□□□ -1.65
SCFD1-211ENST00000554437 MSH3P20585 1137 aa4.73□□□□□ -1.65
SCFD1-211ENST00000554437 CBLP22681 906 aa4.73□□□□□ -1.65
SCFD1-211ENST00000554437 ANOS1P23352 680 aa4.73□□□□□ -1.65
SCFD1-211ENST00000554437 MATR3P43243 847 aaKnown RBP eCLIP4.73□□□□□ -1.65
SCFD1-211ENST00000554437 SIRPAP78324 504 aa4.73□□□□□ -1.65
SCFD1-211ENST00000554437 SMC1AQ14683 1233 aaKnown RBP4.73□□□□□ -1.65
SCFD1-211ENST00000554437 DHRS7BQ6IAN0 325 aaPredicted RBP4.73□□□□□ -1.65
SCFD1-211ENST00000554437 CASC1Q6TDU7 716 aa4.73□□□□□ -1.65
SCFD1-211ENST00000554437 DENND5BQ6ZUT9 1274 aa4.73□□□□□ -1.65
SCFD1-211ENST00000554437 ANO5Q75V66 913 aa4.73□□□□□ -1.65
SCFD1-211ENST00000554437 GALNTL5Q7Z4T8 443 aa4.73□□□□□ -1.65
SCFD1-211ENST00000554437 IQCA1Q86XH1 822 aa4.73□□□□□ -1.65
SCFD1-211ENST00000554437 SCML4Q8N228 414 aa4.73□□□□□ -1.65
SCFD1-211ENST00000554437 FBXO39Q8N4B4 442 aa4.73□□□□□ -1.65
SCFD1-211ENST00000554437 KLHDC9Q8NEP7 349 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms