RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 CNOT10Q9H9A5 744 aaKnown RBP4.94□□□□□ -1.62
CHD8-207ENST00000554384 NPAP1Q9NZP6 1156 aa4.94□□□□□ -1.62
CHD8-207ENST00000554384 CGNL1Q0VF96 1302 aa4.94□□□□□ -1.62
CHD8-207ENST00000554384 TCOF1Q13428 1488 aaKnown RBP4.94□□□□□ -1.62
CHD8-207ENST00000554384 ABCA9Q8IUA7 1624 aa4.94□□□□□ -1.62
CHD8-207ENST00000554384 ZMYM4Q5VZL5 1548 aa4.93□□□□□ -1.62
CHD8-207ENST00000554384 MAGEA13PA6NCF6 341 aa4.93□□□□□ -1.62
CHD8-207ENST00000554384 ZNHIT1O43257 154 aa4.93□□□□□ -1.62
CHD8-207ENST00000554384 SLC28A2O43868 658 aa4.93□□□□□ -1.62
CHD8-207ENST00000554384 SSX4O60224 188 aa4.93□□□□□ -1.62
CHD8-207ENST00000554384 ABCA8O94911 1581 aa4.93□□□□□ -1.62
CHD8-207ENST00000554384 AZGP1P25311 298 aaKnown RBP4.93□□□□□ -1.62
CHD8-207ENST00000554384 ARCN1P48444 511 aaKnown RBP4.93□□□□□ -1.62
CHD8-207ENST00000554384 FOXG1P55316 489 aaPredicted RBP4.93□□□□□ -1.62
CHD8-207ENST00000554384 PLIN5Q00G26 463 aa4.93□□□□□ -1.62
CHD8-207ENST00000554384 RALGDSQ12967 914 aa4.93□□□□□ -1.62
CHD8-207ENST00000554384 PLA2G7Q13093 441 aa4.93□□□□□ -1.62
CHD8-207ENST00000554384 CRY2Q49AN0 593 aa4.93□□□□□ -1.62
CHD8-207ENST00000554384 KLHL26Q53HC5 615 aa4.93□□□□□ -1.62
CHD8-207ENST00000554384 KRBOX4Q5JUW0 171 aa4.93□□□□□ -1.62
CHD8-207ENST00000554384 FAM122CQ6P4D5 195 aa4.93□□□□□ -1.62
CHD8-207ENST00000554384 RICTORQ6R327 1708 aa4.93□□□□□ -1.62
CHD8-207ENST00000554384 MEPCEQ7L2J0 689 aaKnown RBP4.93□□□□□ -1.62
CHD8-207ENST00000554384 RBM23Q86U06 439 aaKnown RBP4.93□□□□□ -1.62
CHD8-207ENST00000554384 TMEM173Q86WV6 379 aaPredicted RBP4.93□□□□□ -1.62
CHD8-207ENST00000554384 SFR1Q86XK3 245 aa4.93□□□□□ -1.62
CHD8-207ENST00000554384 OR10S1Q8NGN2 331 aa4.93□□□□□ -1.62
CHD8-207ENST00000554384 MRPS27Q92552 414 aaKnown RBP4.93□□□□□ -1.62
CHD8-207ENST00000554384 RMDN1Q96DB5 314 aa4.93□□□□□ -1.62
CHD8-207ENST00000554384 SPACA9Q96E40 222 aaPredicted RBP4.93□□□□□ -1.62
CHD8-207ENST00000554384 BICD1Q96G01 975 aa4.93□□□□□ -1.62
CHD8-207ENST00000554384 ZNF385AQ96PM9 386 aaKnown RBP4.93□□□□□ -1.62
CHD8-207ENST00000554384 FNDC11Q9BVV2 318 aa4.93□□□□□ -1.62
CHD8-207ENST00000554384 SCAPERQ9BY12 1400 aa4.93□□□□□ -1.62
CHD8-207ENST00000554384 DPAGT1Q9H3H5 408 aa4.93□□□□□ -1.62
CHD8-207ENST00000554384 MIOSQ9NXC5 875 aa4.93□□□□□ -1.62
CHD8-207ENST00000554384 PTTG2Q9NZH5 202 aa4.93□□□□□ -1.62
CHD8-207ENST00000554384 MAGI2Q86UL8 1455 aa4.93□□□□□ -1.62
CHD8-207ENST00000554384 C3P01024 1663 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 LRRC7Q96NW7 1537 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 SAA2-SAA4A0A096LPE2 208 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 TEX13DA0A0J9YY54 714 aaPredicted RBP4.92□□□□□ -1.62
CHD8-207ENST00000554384 EDDM13A0A1B0GTR0 161 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 ZCWPW2A0A1B0GU75 182 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 TCRBV21S2A2A0A5A6 115 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 TULP2O00295 520 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 INSIG1O15503 277 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 PRAMEF11O60813 436 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 CELF2O95319 508 aaKnown RBP4.92□□□□□ -1.62
CHD8-207ENST00000554384 FAM106CPP0CH98 169 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 GLULP15104 373 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 PFKFB1P16118 471 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 PSMC4P43686 418 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 RAD23AP54725 363 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 CSE1LP55060 971 aaKnown RBP4.92□□□□□ -1.62
CHD8-207ENST00000554384 ZXDBP98169 803 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 IRAK1BP1Q5VVH5 260 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 C9orf57Q5W0N0 161 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 ZNF772Q68DY9 489 aaPredicted RBP4.92□□□□□ -1.62
CHD8-207ENST00000554384 TRNP1Q6NT89 227 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 PLXDC2Q6UX71 529 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 SLC9B2Q86UD5 537 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 IQCHQ86VS3 1027 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 KMT5CQ86Y97 462 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 FAM114A1Q8IWE2 563 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 SLC4A11Q8NBS3 891 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 OR5M8Q8NGP6 311 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 TMEM255BQ8WV15 326 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 SORCS1Q8WY21 1168 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 SMPDL3BQ92485 455 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 LINGO1Q96FE5 620 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 FAM84BQ96KN1 310 aaPredicted RBP4.92□□□□□ -1.62
CHD8-207ENST00000554384 NEK1Q96PY6 1258 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 SLX1AQ9BQ83 275 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 ABHD6Q9BV23 337 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 HHATLQ9HCP6 504 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 EQTNQ9NQ60 294 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 PRMT7Q9NVM4 692 aaPredicted RBP4.92□□□□□ -1.62
CHD8-207ENST00000554384 YIPF1Q9Y548 306 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 PCDHAC2Q9Y5I4 1007 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 BIVM-ERCC5R4GMW8 1640 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 TRIP12Q14669 1992 aaPredicted RBP4.92□□□□□ -1.62
CHD8-207ENST00000554384 PLA2R1Q13018 1463 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 RAPGEF2Q9Y4G8 1499 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 ZNF541Q9H0D2 1346 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 UGGT2Q9NYU1 1516 aa4.92□□□□□ -1.62
CHD8-207ENST00000554384 KIF27Q86VH2 1401 aa4.91□□□□□ -1.62
CHD8-207ENST00000554384 IGHV4OR15-8A0A075B7B6 117 aa4.91□□□□□ -1.62
CHD8-207ENST00000554384 ANKUB1A6NFN9 424 aa4.91□□□□□ -1.62
CHD8-207ENST00000554384 SYNCRIPO60506 623 aaKnown RBP4.91□□□□□ -1.62
CHD8-207ENST00000554384 HSPA4LO95757 839 aa4.91□□□□□ -1.62
CHD8-207ENST00000554384 LIPFP07098 398 aa4.91□□□□□ -1.62
CHD8-207ENST00000554384 ACP2P11117 423 aa4.91□□□□□ -1.62
CHD8-207ENST00000554384 GM2AP17900 193 aa4.91□□□□□ -1.62
CHD8-207ENST00000554384 CBLP22681 906 aa4.91□□□□□ -1.62
CHD8-207ENST00000554384 TPD52P55327 224 aaPredicted RBP4.91□□□□□ -1.62
CHD8-207ENST00000554384 EEF1A2Q05639 463 aaKnown RBP4.91□□□□□ -1.62
CHD8-207ENST00000554384 KIF19Q2TAC6 998 aa4.91□□□□□ -1.62
CHD8-207ENST00000554384 GCNT6Q5T4J0 391 aa4.91□□□□□ -1.62
CHD8-207ENST00000554384 NADSYN1Q6IA69 706 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms