RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, human

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP44-208	ENST00000552440	NKX2-2	O95096	273 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	SMC2	O95347	1197 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	MOCS3	O95396	460 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	IL1B	P01584	269 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	PGK2	P07205	417 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	ZNF853	P0CG23	659 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	CALCB	P10092	127 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	CYP4B1	P13584	511 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	HPGD	P15428	266 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	CKMT2	P17540	419 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	DNASE1	P24855	282 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	CTNNA2	P26232	953 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	S100A5	P33763	92 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	GJC1	P36383	396 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	MAGEA1	P43355	309 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	OAZ1	P54368	228 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	PRMT2	P55345	433 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	SLC8A3	P57103	927 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	LIPE	Q05469	1076 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	PIGF	Q07326	219 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	KRTAP1-1	Q07627	177 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	MTAP	Q13126	283 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	SRSF5	Q13243	272 aa	Known RBP	4.13	□□□□□ -1.75
USP44-208	ENST00000552440	BFSP2	Q13515	415 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	ALKBH1	Q13686	389 aa	Known RBP	4.13	□□□□□ -1.75
USP44-208	ENST00000552440	PDE7A	Q13946	482 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	CCNI	Q14094	377 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	RNPS1	Q15287	305 aa	Known RBP	4.13	□□□□□ -1.75
USP44-208	ENST00000552440	DLG2	Q15700	870 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	FSCB	Q5H9T9	825 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	TAPT1	Q6NXT6	567 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	C6orf89	Q6UWU4	347 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	LAYN	Q6UX15	382 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	ZNF813	Q6ZN06	617 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	ADIPOR2	Q86V24	386 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	ZDHHC21	Q8IVQ6	265 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	FAM219A	Q8IW50	185 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	CCDC65	Q8IXS2	484 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	KRT222	Q8N1A0	295 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	SLC43A2	Q8N370	569 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	C11orf44	Q8N8P7	122 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	NSUN7	Q8NE18	718 aa	Known RBP	4.13	□□□□□ -1.75
USP44-208	ENST00000552440	OR8J1	Q8NGP2	316 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	OR52J3	Q8NH60	311 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	TMEM171	Q8WVE6	324 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	LARP4B	Q92615	738 aa	Known RBP	4.13	□□□□□ -1.75
USP44-208	ENST00000552440	RASD2	Q96D21	266 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	TRMT61A	Q96FX7	289 aa	Known RBP	4.13	□□□□□ -1.75
USP44-208	ENST00000552440	ZNF512	Q96ME7	567 aa	Predicted RBP	4.13	□□□□□ -1.75
USP44-208	ENST00000552440	PANX3	Q96QZ0	392 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	NEU1	Q99519	415 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	PIGQ	Q9BRB3	760 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	FAM192A	Q9GZU8	254 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	METTL7A	Q9H8H3	244 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	EVA1A	Q9H8M9	152 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	LMAN1L	Q9HAT1	526 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	MTMR4	Q9NYA4	1195 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	TBC1D7	Q9P0N9	293 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	THEG	Q9P2T0	379 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	UBQLN2	Q9UHD9	624 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	MFHAS1	Q9Y4C4	1052 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	PHLPP2	Q6ZVD8	1323 aa		4.13	□□□□□ -1.75
USP44-208	ENST00000552440	SLC15A5	A6NIM6	579 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440		K7EQM0	130 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	ZNF213	O14771	459 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	XPO1	O14980	1071 aa	Known RBP	4.12	□□□□□ -1.75
USP44-208	ENST00000552440	YKT6	O15498	198 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	LRRTM2	O43300	516 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	TBX19	O60806	448 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	B4GALT2	O60909	372 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	SERPINA3	P01011	423 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	CXCL10	P02778	98 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	IQCF3	P0C7M6	154 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	CLU	P10909	449 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	IRF1	P10914	325 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	G6PD	P11413	515 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	PFKFB1	P16118	471 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	DRD5	P21918	477 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	CPN2	P22792	545 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	CCND3	P30281	292 aa	Predicted RBP	4.12	□□□□□ -1.75
USP44-208	ENST00000552440	PKLR	P30613	574 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	ALDH1B1	P30837	517 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	NF2	P35240	595 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	PTPN9	P43378	593 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	HTR6	P50406	440 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	CLCN3	P51790	818 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	SMS	P52788	366 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	MFAP3	P55082	362 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	MAP3K7CL	P57077	242 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	RPS8	P62241	208 aa	Known RBP	4.12	□□□□□ -1.75
USP44-208	ENST00000552440	GPC5	P78333	572 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	DNAJC3	Q13217	504 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	RBBP5	Q15291	538 aa	Known RBP	4.12	□□□□□ -1.75
USP44-208	ENST00000552440	VWC2	Q2TAL6	325 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	GXYLT1	Q4G148	440 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	SERTAD4-AS1	Q5TG53	156 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	FNDC7	Q5VTL7	733 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	DHRS7B	Q6IAN0	325 aa	Predicted RBP	4.12	□□□□□ -1.75
USP44-208	ENST00000552440	EFCAB12	Q6NXP0	572 aa		4.12	□□□□□ -1.75
USP44-208	ENST00000552440	TMEM88	Q6PEY1	159 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms