RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 BPIP17213 487 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 ERCC2P18074 760 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 MMP8P22894 467 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 RPL10P27635 214 aaKnown RBP5.24□□□□□ -1.57
HOXB3-213ENST00000552000 HSPA9P38646 679 aaKnown RBP5.24□□□□□ -1.57
HOXB3-213ENST00000552000 MTIF2P46199 727 aaKnown RBP5.24□□□□□ -1.57
HOXB3-213ENST00000552000 CLCNKAP51800 687 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 EPHB1P54762 984 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 GSDMDP57764 484 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 MAXP61244 160 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 TUBB4BP68371 445 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 TUBB2AQ13885 445 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 CA9Q16790 459 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 PTCHD3Q3KNS1 767 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 TDRD12Q587J7 1177 aaKnown RBP5.24□□□□□ -1.57
HOXB3-213ENST00000552000 VWA2Q5GFL6 755 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 DNTTIP2Q5QJE6 756 aaKnown RBP5.24□□□□□ -1.57
HOXB3-213ENST00000552000 DPY19L2P1Q6NXN4 242 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 IGFL3Q6UXB1 125 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 MRGPREQ86SM8 312 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 CDH24Q86UP0 819 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 TREML1Q86YW5 311 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 DSELQ8IZU8 1212 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 D2HGDHQ8N465 521 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 AOPEPQ8N6M6 819 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 FAR1Q8WVX9 515 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 PIH1D2Q8WWB5 315 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 ITLN2Q8WWU7 325 aaPredicted RBP5.24□□□□□ -1.57
HOXB3-213ENST00000552000 CXorf40BQ96DE9 158 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 CNDP1Q96KN2 507 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 TRAPPC9Q96Q05 1148 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 NUDCD1Q96RS6 583 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 WDR24Q96S15 920 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 TUBB2BQ9BVA1 445 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 SELENOOQ9BVL4 669 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 CARD9Q9H257 536 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 VPS16Q9H269 839 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 RMI1Q9H9A7 625 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 CHST11Q9NPF2 352 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 KCND1Q9NSA2 647 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 FAM207AQ9NSI2 230 aaPredicted RBP5.24□□□□□ -1.57
HOXB3-213ENST00000552000 POT1Q9NUX5 634 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 SEMA5BQ9P283 1151 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 ATXN10Q9UBB4 475 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 TRIM10Q9UDY6 481 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 SLC23A2Q9UGH3 650 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 ZDHHC9Q9Y397 364 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 PPIL1Q9Y3C6 166 aa5.24□□□□□ -1.57
HOXB3-213ENST00000552000 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.24□□□□□ -1.57
HOXB3-213ENST00000552000 SCN2AQ99250 2005 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 A0A0J9YYE9 177 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 UBA6A0AVT1 1052 aaPredicted RBP5.23□□□□□ -1.57
HOXB3-213ENST00000552000 TLCD2A6NGC4 264 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 KLHL41O60662 606 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 ADAM11O75078 769 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 CLDN7O95471 211 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 PEX11BO96011 259 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 TRBC1P01850 177 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 ZNF30P17039 623 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 ZNF7P17097 686 aaPredicted RBP5.23□□□□□ -1.57
HOXB3-213ENST00000552000 CHRNB2P17787 502 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 IL4RP24394 825 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 SSTR2P30874 369 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 HTR7P34969 479 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 RORAP35398 523 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 TSFMP43897 325 aaKnown RBP5.23□□□□□ -1.57
HOXB3-213ENST00000552000 ZNF143P52747 638 aaPredicted RBP5.23□□□□□ -1.57
HOXB3-213ENST00000552000 DRG2P55039 364 aaKnown RBP5.23□□□□□ -1.57
HOXB3-213ENST00000552000 KCNK10P57789 538 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 RPL7AP62424 266 aaKnown RBP5.23□□□□□ -1.57
HOXB3-213ENST00000552000 HSD11B2P80365 405 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 FMO1Q01740 532 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 PTP4A2Q12974 167 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 ABRQ12979 859 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 CDC16Q13042 620 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 NCF4Q15080 339 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 INSCQ1MX18 579 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 ZNF630Q2M218 657 aaPredicted RBP5.23□□□□□ -1.57
HOXB3-213ENST00000552000 DCAF10Q5QP82 559 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 HENMT1Q5T8I9 393 aaKnown RBP5.23□□□□□ -1.57
HOXB3-213ENST00000552000 KLHDC7AQ5VTJ3 777 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 FBXO38Q6PIJ6 1188 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 TRIM72Q6ZMU5 477 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 SPOCD1Q6ZMY3 1216 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 BNC2Q6ZN30 1099 aaPredicted RBP5.23□□□□□ -1.57
HOXB3-213ENST00000552000 RFX8Q6ZV50 586 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 MRGPRGQ86SM5 289 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 KMT5CQ86Y97 462 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 HSCBQ8IWL3 235 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 RBM12BQ8IXT5 1001 aaKnown RBP5.23□□□□□ -1.57
HOXB3-213ENST00000552000 SYTL1Q8IYJ3 562 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 NDUFAF2Q8N183 169 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 BBS5Q8N3I7 341 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.23□□□□□ -1.57
HOXB3-213ENST00000552000 CLEC1AQ8NC01 280 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 GPR150Q8NGU9 434 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 OR8K5Q8NH50 307 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 CPT1BQ92523 772 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 TM9SF4Q92544 642 aa5.23□□□□□ -1.57
HOXB3-213ENST00000552000 RELTQ969Z4 430 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms