RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 IVDP26440 423 aa15.05■□□□□ -0
PRPF40B-211ENST00000551063 CSTF2P33240 577 aaKnown RBP eCLIP15.05■□□□□ -0
PRPF40B-211ENST00000551063 ARCN1P48444 511 aaKnown RBP15.05■□□□□ -0
PRPF40B-211ENST00000551063 MORF4L2Q15014 288 aa15.05■□□□□ -0
PRPF40B-211ENST00000551063 PLCL1Q15111 1095 aa15.05■□□□□ -0
PRPF40B-211ENST00000551063 ANKRD20A4Q4UJ75 823 aa15.05■□□□□ -0
PRPF40B-211ENST00000551063 SYTL3Q4VX76 610 aa15.05■□□□□ -0
PRPF40B-211ENST00000551063 IZUMO3Q5VZ72 239 aa15.05■□□□□ -0
PRPF40B-211ENST00000551063 DUS1LQ6P1R4 473 aaKnown RBP15.05■□□□□ -0
PRPF40B-211ENST00000551063 CES3Q6UWW8 571 aa15.05■□□□□ -0
PRPF40B-211ENST00000551063 SYT10Q6XYQ8 523 aa15.05■□□□□ -0
PRPF40B-211ENST00000551063 ARHGAP22Q7Z5H3 698 aa15.05■□□□□ -0
PRPF40B-211ENST00000551063 SDCCAG8Q86SQ7 713 aaPredicted RBP15.05■□□□□ -0
PRPF40B-211ENST00000551063 LDB1Q86U70 411 aaPredicted RBP15.05■□□□□ -0
PRPF40B-211ENST00000551063 OTUD6BQ8N6M0 293 aa15.05■□□□□ -0
PRPF40B-211ENST00000551063 RCBTB1Q8NDN9 531 aa15.05■□□□□ -0
PRPF40B-211ENST00000551063 ZNF248Q8NDW4 579 aa15.05■□□□□ -0
PRPF40B-211ENST00000551063 RSC1A1Q92681 617 aa15.05■□□□□ -0
PRPF40B-211ENST00000551063 ZNF669Q96BR6 464 aaPredicted RBP15.05■□□□□ -0
PRPF40B-211ENST00000551063 TCF12Q99081 682 aa15.05■□□□□ -0
PRPF40B-211ENST00000551063 CARD6Q9BX69 1037 aa15.05■□□□□ -0
PRPF40B-211ENST00000551063 P2RY12Q9H244 342 aa15.05■□□□□ -0
PRPF40B-211ENST00000551063 PISDQ9UG56 409 aa15.05■□□□□ -0
PRPF40B-211ENST00000551063 SLC24A2Q9UI40 661 aa15.05■□□□□ -0
PRPF40B-211ENST00000551063 ACSL6Q9UKU0 697 aa15.05■□□□□ -0
PRPF40B-211ENST00000551063 CFAP20Q9Y6A4 193 aaKnown RBP15.05■□□□□ -0
PRPF40B-211ENST00000551063 RPS6KL1Q9Y6S9 549 aa15.05■□□□□ -0
PRPF40B-211ENST00000551063 BPTFQ12830 3046 aa15.05■□□□□ -0
PRPF40B-211ENST00000551063 SLC5A10A0PJK1 596 aa15.04■□□□□ -0
PRPF40B-211ENST00000551063 B4E171 279 aa15.04■□□□□ -0
PRPF40B-211ENST00000551063 NDC80O14777 642 aa15.04■□□□□ -0
PRPF40B-211ENST00000551063 TTI1O43156 1089 aa15.04■□□□□ -0
PRPF40B-211ENST00000551063 TYRP1P17643 537 aa15.04■□□□□ -0
PRPF40B-211ENST00000551063 ITIH1P19827 911 aa15.04■□□□□ -0
PRPF40B-211ENST00000551063 MPSTP25325 297 aa15.04■□□□□ -0
PRPF40B-211ENST00000551063 EIF2S3P41091 472 aaKnown RBP15.04■□□□□ -0
PRPF40B-211ENST00000551063 TSPAN7P41732 249 aa15.04■□□□□ -0
PRPF40B-211ENST00000551063 PREPP48147 710 aa15.04■□□□□ -0
PRPF40B-211ENST00000551063 ADARP55265 1226 aaKnown RBP15.04■□□□□ -0
PRPF40B-211ENST00000551063 GFERP55789 205 aa15.04■□□□□ -0
PRPF40B-211ENST00000551063 DNAJC21Q5F1R6 531 aaKnown RBP15.04■□□□□ -0
PRPF40B-211ENST00000551063 LMNTD2Q8IXW0 634 aa15.04■□□□□ -0
PRPF40B-211ENST00000551063 AGGF1Q8N302 714 aaeCLIP15.04■□□□□ -05e-8■■■■■ 39.9
PRPF40B-211ENST00000551063 STAMBPL1Q96FJ0 436 aa15.04■□□□□ -0
PRPF40B-211ENST00000551063 SIGLEC10Q96LC7 697 aa15.04■□□□□ -0
PRPF40B-211ENST00000551063 C9orf72Q96LT7 481 aa15.04■□□□□ -0
PRPF40B-211ENST00000551063 PANX3Q96QZ0 392 aa15.04■□□□□ -0
PRPF40B-211ENST00000551063 MVB12BQ9H7P6 319 aa15.04■□□□□ -0
PRPF40B-211ENST00000551063 GNPTGQ9UJJ9 305 aa15.04■□□□□ -0
PRPF40B-211ENST00000551063 VPS9D1Q9Y2B5 631 aa15.04■□□□□ -0
PRPF40B-211ENST00000551063 MAD1L1Q9Y6D9 718 aa15.04■□□□□ -0
PRPF40B-211ENST00000551063 ZCWPW2A0A1B0GU75 182 aa15.03■□□□□ -0
PRPF40B-211ENST00000551063 EIF4E1BA6NMX2 242 aaKnown RBP15.03■□□□□ -0
PRPF40B-211ENST00000551063 NVLO15381 856 aaKnown RBP15.03■□□□□ -0
PRPF40B-211ENST00000551063 CAPN5O15484 640 aaPredicted RBP15.03■□□□□ -0
PRPF40B-211ENST00000551063 PGAM1P18669 254 aa15.03■□□□□ -0
PRPF40B-211ENST00000551063 PDHA2P29803 388 aa15.03■□□□□ -0
PRPF40B-211ENST00000551063 BOP1Q14137 746 aaKnown RBP15.03■□□□□ -0
PRPF40B-211ENST00000551063 KRT33BQ14525 404 aa15.03■□□□□ -0
PRPF40B-211ENST00000551063 TMEM164Q5U3C3 297 aa15.03■□□□□ -0
PRPF40B-211ENST00000551063 NEPROQ6NW34 567 aa15.03■□□□□ -0
PRPF40B-211ENST00000551063 PRSS42Q7Z5A4 293 aa15.03■□□□□ -0
PRPF40B-211ENST00000551063 OOSP2Q86WS3 158 aa15.03■□□□□ -0
PRPF40B-211ENST00000551063 ACVR1CQ8NER5 493 aa15.03■□□□□ -0
PRPF40B-211ENST00000551063 SPATA4Q8NEY3 305 aa15.03■□□□□ -0
PRPF40B-211ENST00000551063 LPGAT1Q92604 370 aa15.03■□□□□ -0
PRPF40B-211ENST00000551063 ZDHHC12Q96GR4 267 aa15.03■□□□□ -0
PRPF40B-211ENST00000551063 SNF8Q96H20 258 aa15.03■□□□□ -0
PRPF40B-211ENST00000551063 FCRL3Q96P31 734 aaPredicted RBP15.03■□□□□ -0
PRPF40B-211ENST00000551063 KRT12Q99456 494 aa15.03■□□□□ -0
PRPF40B-211ENST00000551063 TRIM56Q9BRZ2 755 aaKnown RBP15.03■□□□□ -0
PRPF40B-211ENST00000551063 TRIM51Q9BSJ1 452 aa15.03■□□□□ -0
PRPF40B-211ENST00000551063 NAT9Q9BTE0 207 aa15.03■□□□□ -0
PRPF40B-211ENST00000551063 PCDHGA3Q9Y5H0 932 aa15.03■□□□□ -0
PRPF40B-211ENST00000551063 CELSR3Q9NYQ7 3312 aa15.03■□□□□ -0
PRPF40B-211ENST00000551063 AHCTF1Q8WYP5 2266 aa15.03■□□□□ -0
PRPF40B-211ENST00000551063 OR5K3A6NET4 321 aa15.02■□□□□ -0
PRPF40B-211ENST00000551063 GOLGA8KD6RF30 607 aa15.02■□□□□ -0
PRPF40B-211ENST00000551063 H3BMM5 538 aa15.02■□□□□ -0
PRPF40B-211ENST00000551063 GOLGA8TH3BQL2 631 aa15.02■□□□□ -0
PRPF40B-211ENST00000551063 SEC31AO94979 1220 aaKnown RBP15.02■□□□□ -0
PRPF40B-211ENST00000551063 TTC4O95801 387 aa15.02■□□□□ -0
PRPF40B-211ENST00000551063 ESR1P03372 595 aa15.02■□□□□ -0
PRPF40B-211ENST00000551063 APOA4P06727 396 aa15.02■□□□□ -0
PRPF40B-211ENST00000551063 CCL4P13236 92 aa15.02■□□□□ -0
PRPF40B-211ENST00000551063 CD82P27701 267 aa15.02■□□□□ -0
PRPF40B-211ENST00000551063 CCR7P32248 378 aa15.02■□□□□ -0
PRPF40B-211ENST00000551063 ETV5P41161 510 aa15.02■□□□□ -0
PRPF40B-211ENST00000551063 RAB15P59190 212 aa15.02■□□□□ -0
PRPF40B-211ENST00000551063 THOC5Q13769 683 aaKnown RBP15.02■□□□□ -0
PRPF40B-211ENST00000551063 TMED2Q15363 201 aa15.02■□□□□ -0
PRPF40B-211ENST00000551063 LONRF1Q17RB8 773 aa15.02■□□□□ -0
PRPF40B-211ENST00000551063 SNAP47Q5SQN1 464 aa15.02■□□□□ -0
PRPF40B-211ENST00000551063 PTRHD1Q6GMV3 140 aaKnown RBP15.02■□□□□ -0
PRPF40B-211ENST00000551063 HIBCHQ6NVY1 386 aaPredicted RBP15.02■□□□□ -0
PRPF40B-211ENST00000551063 CILP2Q8IUL8 1156 aa15.02■□□□□ -0
PRPF40B-211ENST00000551063 SLC22A15Q8IZD6 547 aa15.02■□□□□ -0
PRPF40B-211ENST00000551063 PDIK1LQ8N165 341 aa15.02■□□□□ -0
PRPF40B-211ENST00000551063 LKAAEAR1Q8TD35 194 aa15.02■□□□□ -0
PRPF40B-211ENST00000551063 CALML6Q8TD86 181 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms