RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 USP1O94782 785 aa18.27■□□□□ 0.52
PRPF40B-206ENST00000547764 C9P02748 559 aa18.27■□□□□ 0.52
PRPF40B-206ENST00000547764 CCL4P13236 92 aa18.27■□□□□ 0.52
PRPF40B-206ENST00000547764 CCR7P32248 378 aa18.27■□□□□ 0.52
PRPF40B-206ENST00000547764 ETV5P41161 510 aa18.27■□□□□ 0.52
PRPF40B-206ENST00000547764 CAPZBP47756 277 aa18.27■□□□□ 0.52
PRPF40B-206ENST00000547764 MRPS25P82663 173 aaKnown RBP18.27■□□□□ 0.52
PRPF40B-206ENST00000547764 BOP1Q14137 746 aaKnown RBP18.27■□□□□ 0.52
PRPF40B-206ENST00000547764 KRT33BQ14525 404 aa18.27■□□□□ 0.52
PRPF40B-206ENST00000547764 MORF4L2Q15014 288 aa18.27■□□□□ 0.52
PRPF40B-206ENST00000547764 PLCL1Q15111 1095 aa18.27■□□□□ 0.52
PRPF40B-206ENST00000547764 TYSND1Q2T9J0 566 aa18.27■□□□□ 0.52
PRPF40B-206ENST00000547764 MSS51Q4VC12 460 aa18.27■□□□□ 0.52
PRPF40B-206ENST00000547764 NEPROQ6NW34 567 aa18.27■□□□□ 0.52
PRPF40B-206ENST00000547764 ARHGAP22Q7Z5H3 698 aa18.27■□□□□ 0.52
PRPF40B-206ENST00000547764 AGBL5Q8NDL9 886 aa18.27■□□□□ 0.52
PRPF40B-206ENST00000547764 LKAAEAR1Q8TD35 194 aa18.27■□□□□ 0.52
PRPF40B-206ENST00000547764 STAMBPL1Q96FJ0 436 aa18.27■□□□□ 0.52
PRPF40B-206ENST00000547764 FERD3LQ96RJ6 166 aa18.27■□□□□ 0.52
PRPF40B-206ENST00000547764 CARD6Q9BX69 1037 aa18.27■□□□□ 0.52
PRPF40B-206ENST00000547764 TRIM31Q9BZY9 425 aa18.27■□□□□ 0.52
PRPF40B-206ENST00000547764 KIR3DX1Q9H7L2 352 aa18.27■□□□□ 0.52
PRPF40B-206ENST00000547764 SLC24A2Q9UI40 661 aa18.27■□□□□ 0.52
PRPF40B-206ENST00000547764 ZZEF1O43149 2961 aa18.27■□□□□ 0.51
PRPF40B-206ENST00000547764 CAPN5O15484 640 aaPredicted RBP18.26■□□□□ 0.51
PRPF40B-206ENST00000547764 BANF1O75531 89 aa18.26■□□□□ 0.51
PRPF40B-206ENST00000547764 OGNP20774 298 aaKnown RBP18.26■□□□□ 0.51
PRPF40B-206ENST00000547764 RPS3P23396 243 aaKnown RBP eCLIP18.26■□□□□ 0.51
PRPF40B-206ENST00000547764 NDUFS1P28331 727 aa18.26■□□□□ 0.51
PRPF40B-206ENST00000547764 CSTF2P33240 577 aaKnown RBP eCLIP18.26■□□□□ 0.51
PRPF40B-206ENST00000547764 EIF2S3P41091 472 aaKnown RBP18.26■□□□□ 0.51
PRPF40B-206ENST00000547764 DHX9Q08211 1270 aaKnown RBP18.26■□□□□ 0.51
PRPF40B-206ENST00000547764 SYTL3Q4VX76 610 aa18.26■□□□□ 0.51
PRPF40B-206ENST00000547764 PTRHD1Q6GMV3 140 aaKnown RBP18.26■□□□□ 0.51
PRPF40B-206ENST00000547764 HIBCHQ6NVY1 386 aaPredicted RBP18.26■□□□□ 0.51
PRPF40B-206ENST00000547764 CLEC14AQ86T13 490 aa18.26■□□□□ 0.51
PRPF40B-206ENST00000547764 PDZD3Q86UT5 571 aa18.26■□□□□ 0.51
PRPF40B-206ENST00000547764 LRRC6Q86X45 466 aa18.26■□□□□ 0.51
PRPF40B-206ENST00000547764 KRT222Q8N1A0 295 aa18.26■□□□□ 0.51
PRPF40B-206ENST00000547764 PHC3Q8NDX5 983 aa18.26■□□□□ 0.51
PRPF40B-206ENST00000547764 TFGQ92734 400 aaPredicted RBP18.26■□□□□ 0.51
PRPF40B-206ENST00000547764 SNF8Q96H20 258 aa18.26■□□□□ 0.51
PRPF40B-206ENST00000547764 DCBLD2Q96PD2 775 aa18.26■□□□□ 0.51
PRPF40B-206ENST00000547764 TGM7Q96PF1 710 aa18.26■□□□□ 0.51
PRPF40B-206ENST00000547764 TCF12Q99081 682 aa18.26■□□□□ 0.51
PRPF40B-206ENST00000547764 TSSK1BQ9BXA7 367 aa18.26■□□□□ 0.51
PRPF40B-206ENST00000547764 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.26■□□□□ 0.51
PRPF40B-206ENST00000547764 GNPTGQ9UJJ9 305 aa18.26■□□□□ 0.51
PRPF40B-206ENST00000547764 CACNA1BQ00975 2339 aa18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 UBA6A0AVT1 1052 aaPredicted RBP18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 EFCAB8A8MWE9 144 aa18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 BHMG1C9JSJ3 638 aaPredicted RBP18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 SMAPO00193 183 aa18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 SEC31AO94979 1220 aaKnown RBP18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 FGF3P11487 239 aaPredicted RBP18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 PGAM1P18669 254 aa18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 ACADLP28330 430 aa18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 SLC5A2P31639 672 aa18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 LEPRP48357 1165 aaKnown RBP18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 ITGA8P53708 1063 aa18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 MAPK10P53779 464 aa18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 CSE1LP55060 971 aaKnown RBP18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 EIF3BP55884 814 aaKnown RBP18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 PCBP4P57723 403 aaKnown RBP18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 PLOD1Q02809 727 aaPredicted RBP18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 C2orf54Q08AI8 447 aa18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 THOC5Q13769 683 aaKnown RBP18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 LONRF1Q17RB8 773 aa18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 DNAJC21Q5F1R6 531 aaKnown RBP18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 CTSL3PQ5NE16 218 aa18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 RNF187Q5TA31 235 aaPredicted RBP18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 CENPUQ71F23 418 aa18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 CILP2Q8IUL8 1156 aa18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 LPGAT1Q92604 370 aa18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 C9orf72Q96LT7 481 aa18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 PWWP2AQ96N64 755 aa18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 BIRC8Q96P09 236 aa18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 EBNA1BP2Q99848 306 aaKnown RBP18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 RAB33BQ9H082 229 aa18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 OCIAD1Q9NX40 245 aa18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 EPHA6Q9UF33 1036 aa18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 PCDHGA7Q9Y5G6 932 aa18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 FAM169AQ9Y6X4 670 aa18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 KMT2BQ9UMN6 2715 aaPredicted RBP18.25■□□□□ 0.51
PRPF40B-206ENST00000547764 A0A087WV48 116 aa18.24■□□□□ 0.51
PRPF40B-206ENST00000547764 PFDN6O15212 129 aa18.24■□□□□ 0.51
PRPF40B-206ENST00000547764 TP73O15350 636 aa18.24■□□□□ 0.51
PRPF40B-206ENST00000547764 AOAHP28039 575 aa18.24■□□□□ 0.51
PRPF40B-206ENST00000547764 FMO4P31512 558 aa18.24■□□□□ 0.51
PRPF40B-206ENST00000547764 RPL21P46778 160 aaKnown RBP18.24■□□□□ 0.51
PRPF40B-206ENST00000547764 PPP1CAP62136 330 aa18.24■□□□□ 0.51
PRPF40B-206ENST00000547764 HSPA14Q0VDF9 509 aa18.24■□□□□ 0.51
PRPF40B-206ENST00000547764 BBS9Q3SYG4 887 aa18.24■□□□□ 0.51
PRPF40B-206ENST00000547764 ZNF470Q6ECI4 717 aa18.24■□□□□ 0.51
PRPF40B-206ENST00000547764 IRGCQ6NXR0 463 aa18.24■□□□□ 0.51
PRPF40B-206ENST00000547764 KLHL35Q6PF15 583 aa18.24■□□□□ 0.51
PRPF40B-206ENST00000547764 IGDCC3Q8IVU1 814 aa18.24■□□□□ 0.51
PRPF40B-206ENST00000547764 PDIK1LQ8N165 341 aa18.24■□□□□ 0.51
PRPF40B-206ENST00000547764 ACVR1CQ8NER5 493 aa18.24■□□□□ 0.51
PRPF40B-206ENST00000547764 USP7Q93009 1102 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms