RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 CDKN2AIPNLQ96HQ2 116 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 CD180Q99467 661 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 CCM2Q9BSQ5 444 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 TMEM121Q9BTD3 319 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 OR52A5Q9H2C5 316 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 FGF21Q9NSA1 209 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 NLE1Q9NVX2 485 aaPredicted RBP13□□□□□ -0.33
CPSF6-204ENST00000547486 ZDHHC3Q9NYG2 299 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 FEZ2Q9UHY8 353 aaPredicted RBP13□□□□□ -0.33
CPSF6-204ENST00000547486 RARRES3Q9UL19 164 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 PCDHGA6Q9Y5G7 932 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 COLEC10Q9Y6Z7 277 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 SETXQ7Z333 2677 aaKnown RBP13□□□□□ -0.33
CPSF6-204ENST00000547486 FLNBO75369 2602 aaKnown RBP13□□□□□ -0.33
CPSF6-204ENST00000547486 TLN1Q9Y490 2541 aaKnown RBP12.99□□□□□ -0.33
CPSF6-204ENST00000547486 C17orf113A0A1B0GUU1 675 aa12.99□□□□□ -0.33
CPSF6-204ENST00000547486 SLC9B1P1A6NJY1 282 aa12.99□□□□□ -0.33
CPSF6-204ENST00000547486 H7C0S8 307 aa12.99□□□□□ -0.33
CPSF6-204ENST00000547486 CREG1O75629 220 aa12.99□□□□□ -0.33
CPSF6-204ENST00000547486 RALBP11234 206 aa12.99□□□□□ -0.33
CPSF6-204ENST00000547486 ACRV1P26436 265 aa12.99□□□□□ -0.33
CPSF6-204ENST00000547486 PDHA2P29803 388 aa12.99□□□□□ -0.33
CPSF6-204ENST00000547486 ACY1Q03154 408 aa12.99□□□□□ -0.33
CPSF6-204ENST00000547486 TLE1Q04724 770 aa12.99□□□□□ -0.33
CPSF6-204ENST00000547486 DNASE1L3Q13609 305 aa12.99□□□□□ -0.33
CPSF6-204ENST00000547486 POU6F1Q14863 301 aa12.99□□□□□ -0.33
CPSF6-204ENST00000547486 ZRANB3Q5FWF4 1079 aa12.99□□□□□ -0.33
CPSF6-204ENST00000547486 PRAMEF17Q5VTA0 474 aa12.99□□□□□ -0.33
CPSF6-204ENST00000547486 ARHGEF18Q6ZSZ5 1173 aa12.99□□□□□ -0.33
CPSF6-204ENST00000547486 BPHLQ86WA6 291 aaPredicted RBP12.99□□□□□ -0.33
CPSF6-204ENST00000547486 SERPINA9Q86WD7 417 aa12.99□□□□□ -0.33
CPSF6-204ENST00000547486 KMT5CQ86Y97 462 aa12.99□□□□□ -0.33
CPSF6-204ENST00000547486 UBL4BQ8N7F7 174 aa12.99□□□□□ -0.33
CPSF6-204ENST00000547486 TTC13Q8NBP0 860 aa12.99□□□□□ -0.33
CPSF6-204ENST00000547486 C9orf43Q8TAL5 461 aaPredicted RBP12.99□□□□□ -0.33
CPSF6-204ENST00000547486 HM13Q8TCT9 377 aa12.99□□□□□ -0.33
CPSF6-204ENST00000547486 ZNF501Q96CX3 271 aaPredicted RBP12.99□□□□□ -0.33
CPSF6-204ENST00000547486 HES6Q96HZ4 224 aa12.99□□□□□ -0.33
CPSF6-204ENST00000547486 FCRL4Q96PJ5 515 aa12.99□□□□□ -0.33
CPSF6-204ENST00000547486 PPP1R2P1Q96PQ5 205 aa12.99□□□□□ -0.33
CPSF6-204ENST00000547486 FERD3LQ96RJ6 166 aa12.99□□□□□ -0.33
CPSF6-204ENST00000547486 COG4Q9H9E3 785 aa12.99□□□□□ -0.33
CPSF6-204ENST00000547486 PCDHB3Q9Y5E6 796 aa12.99□□□□□ -0.33
CPSF6-204ENST00000547486 PIPSLA2A3N6 862 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 CCDC78A2IDD5 438 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 CDC14CA4D256 554 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 GOLGA6L9A6NEM1 432 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 MROH6A6NGR9 719 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 MIF4GDA9UHW6 222 aaKnown RBP12.98□□□□□ -0.33
CPSF6-204ENST00000547486 CFAP99D6REC4 459 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 BTN3A3O00478 584 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 ZBTB11O95625 1053 aaPredicted RBP12.98□□□□□ -0.33
CPSF6-204ENST00000547486 AP2A1O95782 977 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 MT-ND3P03897 115 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 PTMAP06454 111 aaKnown RBP12.98□□□□□ -0.33
CPSF6-204ENST00000547486 NR1D1P20393 614 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 PSMA3P25788 255 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 PREPP48147 710 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 ARL4DP49703 201 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 TUBB4BP68371 445 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 KIF5AQ12840 1032 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 TUBB2AQ13885 445 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 SEPT6Q14141 434 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 KRT33BQ14525 404 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 COLEC12Q5KU26 742 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 ARMC6Q6NXE6 501 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 TAS2R42Q7RTR8 314 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 ACVR1CQ8NER5 493 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 HEXDCQ8WVB3 486 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 TUBB2BQ9BVA1 445 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 TWSG1Q9GZX9 223 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 EPN3Q9H201 632 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 LRRC40Q9H9A6 602 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 KCND1Q9NSA2 647 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 KCND3Q9UK17 655 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 PRSS21Q9Y6M0 314 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 CAPN6Q9Y6Q1 641 aa12.98□□□□□ -0.33
CPSF6-204ENST00000547486 OR51F1A6NGY5 319 aa12.97□□□□□ -0.33
CPSF6-204ENST00000547486 BTN3A1O00481 513 aa12.97□□□□□ -0.33
CPSF6-204ENST00000547486 SCRG1O75711 98 aa12.97□□□□□ -0.33
CPSF6-204ENST00000547486 NDUFS1P28331 727 aa12.97□□□□□ -0.33
CPSF6-204ENST00000547486 PRDX3P30048 256 aaKnown RBP12.97□□□□□ -0.33
CPSF6-204ENST00000547486 RPS18P62269 152 aaKnown RBP12.97□□□□□ -0.33
CPSF6-204ENST00000547486 CACNG1Q06432 222 aa12.97□□□□□ -0.33
CPSF6-204ENST00000547486 GPS2Q13227 327 aa12.97□□□□□ -0.33
CPSF6-204ENST00000547486 PRKG2Q13237 762 aa12.97□□□□□ -0.33
CPSF6-204ENST00000547486 LAMB3Q13751 1172 aa12.97□□□□□ -0.33
CPSF6-204ENST00000547486 DBN1Q16643 649 aa12.97□□□□□ -0.33
CPSF6-204ENST00000547486 CCDC38Q502W7 563 aa12.97□□□□□ -0.33
CPSF6-204ENST00000547486 LCN10Q6JVE6 187 aa12.97□□□□□ -0.33
CPSF6-204ENST00000547486 CYB5D1Q6P9G0 228 aa12.97□□□□□ -0.33
CPSF6-204ENST00000547486 PRUNE1Q86TP1 453 aa12.97□□□□□ -0.33
CPSF6-204ENST00000547486 SYCE1Q8N0S2 351 aa12.97□□□□□ -0.33
CPSF6-204ENST00000547486 SPC24Q8NBT2 197 aa12.97□□□□□ -0.33
CPSF6-204ENST00000547486 OR52K1Q8NGK4 314 aa12.97□□□□□ -0.33
CPSF6-204ENST00000547486 STYXQ8WUJ0 223 aa12.97□□□□□ -0.33
CPSF6-204ENST00000547486 LCN9Q8WX39 176 aa12.97□□□□□ -0.33
CPSF6-204ENST00000547486 ATG4AQ8WYN0 398 aa12.97□□□□□ -0.33
CPSF6-204ENST00000547486 TLR10Q9BXR5 811 aa12.97□□□□□ -0.33
CPSF6-204ENST00000547486 SRMSQ9H3Y6 488 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms