RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 SLC22A17Q8WUG5 538 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 DEFB118Q96PH6 123 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 RCOR3Q9P2K3 495 aaPredicted RBP14.44□□□□□ -0.1
HOXC11-202ENST00000546378 ALPIP09923 528 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 AXLP30530 894 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 PNPLA4P41247 253 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 LCP2Q13094 533 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 DMC1Q14565 340 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 ATP6AP1Q15904 470 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 KYAT1Q16773 422 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 RUNDC3AQ59EK9 446 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 PIK3R6Q5UE93 754 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 UBE2UQ5VVX9 321 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 PTRHD1Q6GMV3 140 aaKnown RBP14.44□□□□□ -0.1
HOXC11-202ENST00000546378 FAM120BQ96EK7 910 aaKnown RBP14.44□□□□□ -0.1
HOXC11-202ENST00000546378 SPATA17Q96L03 361 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 SPO11Q9Y5K1 396 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 ASCC3Q8N3C0 2202 aaKnown RBP14.43□□□□□ -0.1
HOXC11-202ENST00000546378 CLDN25C9JDP6 229 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 PQBP1O60828 265 aaKnown RBP14.43□□□□□ -0.1
HOXC11-202ENST00000546378 VIPP01282 170 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 ATP6V0D1P61421 351 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 SFSWAPQ12872 951 aaKnown RBP14.43□□□□□ -0.1
HOXC11-202ENST00000546378 TRAP1Q12931 704 aaKnown RBP14.43□□□□□ -0.1
HOXC11-202ENST00000546378 DAG1Q14118 895 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 RFTN1Q14699 578 aaPredicted RBP14.43□□□□□ -0.1
HOXC11-202ENST00000546378 MAPRE1Q15691 268 aaKnown RBP14.43□□□□□ -0.1
HOXC11-202ENST00000546378 NKG7Q16617 165 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 RSBN1Q5VWQ0 802 aaPredicted RBP14.43□□□□□ -0.1
HOXC11-202ENST00000546378 LETMD1Q6P1Q0 360 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 TMEM179BQ7Z7N9 219 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 SPARTQ8N0X7 666 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 OR8H2Q8N162 312 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 STAG3L4Q8TBR4 150 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 OSCP1Q8WVF1 389 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 NECTIN4Q96NY8 510 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 VAT1Q99536 393 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 HOPXQ9BPY8 73 aaPredicted RBP14.43□□□□□ -0.1
HOXC11-202ENST00000546378 KCNS3Q9BQ31 491 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 TNKS2Q9H2K2 1166 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 TRIM39Q9HCM9 518 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 TLR8Q9NR97 1041 aaKnown RBP14.43□□□□□ -0.1
HOXC11-202ENST00000546378 LEF1Q9UJU2 399 aaPredicted RBP14.43□□□□□ -0.1
HOXC11-202ENST00000546378 GMEB1Q9Y692 573 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 A0A1W2PP18 115 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 ASPDHA6ND91 283 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 SYNDIG1LA6NDD5 238 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 FKTNO75072 461 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 NDUFS2O75306 463 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 IDO1P14902 403 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 OXCT1P55809 520 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 ABRAXAS2Q15018 415 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 POM121L1PQ3SYA9 428 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 TRIM60Q495X7 471 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 C6orf136Q5SQH8 315 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 KIAA0930Q6ICG6 404 aaPredicted RBP14.43□□□□□ -0.1
HOXC11-202ENST00000546378 BLOC1S3Q6QNY0 202 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 SLC2A13Q96QE2 648 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 OR52E6Q96RD3 313 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 DPY30Q9C005 99 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.43□□□□□ -0.1
HOXC11-202ENST00000546378 WWOXQ9NZC7 414 aa14.43□□□□□ -0.1
HOXC11-202ENST00000546378 HTR3EA5X5Y0 456 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 STX7O15400 261 aaKnown RBP14.42□□□□□ -0.1
HOXC11-202ENST00000546378 ANXA6P08133 673 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 CCNCP24863 283 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 PCSK1P29120 753 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 MC4RP32245 332 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 RGRP47804 291 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 COPZ1P61923 177 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 ZBTB6Q15916 424 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 AASDHQ4L235 1098 aaPredicted RBP14.42□□□□□ -0.1
HOXC11-202ENST00000546378 CATSPEREQ5SY80 951 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 ZNF621Q6ZSS3 439 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 SERINC5Q86VE9 423 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 TBC1D21Q8IYX1 336 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 CHCHD6Q9BRQ6 235 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 RNF208Q9H0X6 261 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 MAGEE1Q9HCI5 957 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 COMMD8Q9NX08 183 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 HCSTQ9UBK5 93 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 IRAK2O43187 625 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 CNOT3O75175 753 aaKnown RBP14.42□□□□□ -0.1
HOXC11-202ENST00000546378 FBXL22Q6P050 247 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 CYP20A1Q6UW02 462 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 SZRD1Q7Z422 152 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 PROX1Q92786 737 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 MAELQ96JY0 434 aaKnown RBP14.42□□□□□ -0.1
HOXC11-202ENST00000546378 IPPKQ9H8X2 491 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 ZBTB20Q9HC78 741 aaPredicted RBP14.42□□□□□ -0.1
HOXC11-202ENST00000546378 TAS2R16Q9NYV7 291 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 PCDHB9Q9Y5E1 797 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 PCDHGA11Q9Y5H2 935 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 KPNA4O00629 521 aaPredicted RBP14.42□□□□□ -0.1
HOXC11-202ENST00000546378 MGEA5O60502 916 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 GBAP04062 536 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 MTHFD2P13995 350 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 IFITM3Q01628 133 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 MXD1Q05195 221 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 NPTX1Q15818 432 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms