RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 FAM237BA0A1B0GVD1 139 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 SLC5A10A0PJK1 596 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 SDR42E2A6NKP2 422 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 C9orf172C9J069 976 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.58□□□□□ -0.56
YBX3-217ENST00000546164 CCDC188H7C350 402 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 IFRD1O00458 451 aaPredicted RBP11.58□□□□□ -0.56
YBX3-217ENST00000546164 PRMT5O14744 637 aaPredicted RBP11.58□□□□□ -0.56
YBX3-217ENST00000546164 CAPN5O15484 640 aaPredicted RBP11.58□□□□□ -0.56
YBX3-217ENST00000546164 PDHA2P29803 388 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 ABCG1P45844 678 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 ARCN1P48444 511 aaKnown RBP11.58□□□□□ -0.56
YBX3-217ENST00000546164 PPM1FP49593 454 aaPredicted RBP11.58□□□□□ -0.56
YBX3-217ENST00000546164 GFERP55789 205 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 RAB15P59190 212 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 TLE3Q04726 772 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 TYSND1Q2T9J0 566 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 TMEM164Q5U3C3 297 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 DUS1LQ6P1R4 473 aaKnown RBP11.58□□□□□ -0.56
YBX3-217ENST00000546164 SYDE1Q6ZW31 735 aaPredicted RBP11.58□□□□□ -0.56
YBX3-217ENST00000546164 PRSS42Q7Z5A4 293 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 TMEM135Q86UB9 458 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 PDZD3Q86UT5 571 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 HOOK3Q86VS8 718 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 LRRC6Q86X45 466 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 KCNE4Q8WWG9 221 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 USP7Q93009 1102 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 MARVELD3Q96A59 401 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 ZDHHC12Q96GR4 267 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 CAPZA3Q96KX2 299 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 TAAR9Q96RI9 348 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 TCF12Q99081 682 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 DDA1Q9BW61 102 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 CARD6Q9BX69 1037 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 P2RY12Q9H244 342 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 MVB12BQ9H7P6 319 aa11.58□□□□□ -0.56
YBX3-217ENST00000546164 CFAP20Q9Y6A4 193 aaKnown RBP11.58□□□□□ -0.56
YBX3-217ENST00000546164 DNALI1O14645 258 aaPredicted RBP11.57□□□□□ -0.56
YBX3-217ENST00000546164 PRAMEF10O60809 474 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 VAPBO95292 243 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 PAMP19021 973 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 RPS3P23396 243 aaKnown RBP eCLIP11.57□□□□□ -0.56
YBX3-217ENST00000546164 IVDP26440 423 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 ITPKBP27987 946 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 ACADLP28330 430 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 PREPP48147 710 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 LEPRP48357 1165 aaKnown RBP11.57□□□□□ -0.56
YBX3-217ENST00000546164 MAPK10P53779 464 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 TERF1P54274 439 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 ADARP55265 1226 aaKnown RBP11.57□□□□□ -0.56
YBX3-217ENST00000546164 MC2RQ01718 297 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 BOP1Q14137 746 aaKnown RBP11.57□□□□□ -0.56
YBX3-217ENST00000546164 PLCL1Q15111 1095 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 COL28A1Q2UY09 1125 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 SNAP47Q5SQN1 464 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 RNF187Q5TA31 235 aaPredicted RBP11.57□□□□□ -0.56
YBX3-217ENST00000546164 MRNIPQ6NTE8 343 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 PCGF5Q86SE9 256 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 LDB1Q86U70 411 aaPredicted RBP11.57□□□□□ -0.56
YBX3-217ENST00000546164 JAMLQ86YT9 394 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 ACVR1CQ8NER5 493 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 HNRNPLLQ8WVV9 542 aaKnown RBP11.57□□□□□ -0.56
YBX3-217ENST00000546164 KLHL6Q8WZ60 621 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 ELMO1Q92556 727 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 TFGQ92734 400 aaPredicted RBP11.57□□□□□ -0.56
YBX3-217ENST00000546164 SIGLEC10Q96LC7 697 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 TGM7Q96PF1 710 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 TEFMQ96QE5 360 aaKnown RBP11.57□□□□□ -0.56
YBX3-217ENST00000546164 CD180Q99467 661 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 TSSK1BQ9BXA7 367 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 ASPSCR1Q9BZE9 553 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 ZNF768Q9H5H4 540 aaKnown RBP11.57□□□□□ -0.56
YBX3-217ENST00000546164 TFB2MQ9H5Q4 396 aaKnown RBP11.57□□□□□ -0.56
YBX3-217ENST00000546164 FBXO8Q9NRD0 319 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 OCIAD1Q9NX40 245 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 SIDT1Q9NXL6 827 aaKnown RBP11.57□□□□□ -0.56
YBX3-217ENST00000546164 FOXJ2Q9P0K8 574 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 SAMD15Q9P1V8 674 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 ASIC3Q9UHC3 531 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 MGAQ8IWI9 3026 aa11.57□□□□□ -0.56
YBX3-217ENST00000546164 ZCWPW2A0A1B0GU75 182 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 OR5K3A6NET4 321 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 EFCAB7A8K855 629 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 A8MU76 341 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 BHMG1C9JSJ3 638 aaPredicted RBP11.56□□□□□ -0.56
YBX3-217ENST00000546164 GOLGA8MH3BSY2 632 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 SMAPO00193 183 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 MATN2O00339 956 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 GPC4O75487 556 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 NDUFS3O75489 264 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 USP1O94782 785 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 LIPCP11150 499 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 OGNP20774 298 aaKnown RBP11.56□□□□□ -0.56
YBX3-217ENST00000546164 CCR7P32248 378 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 PAFAH1B1P43034 410 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 UCNP55089 124 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 ETF1P62495 437 aaKnown RBP11.56□□□□□ -0.56
YBX3-217ENST00000546164 CLN3Q13286 438 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 ANKRD20A4Q4UJ75 823 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 CASC4Q6P4E1 433 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms