RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 KIAA0754O94854 1291 aa12.83□□□□□ -0.36
CIT-214ENST00000544588 AP2A2O94973 939 aa12.83□□□□□ -0.36
CIT-214ENST00000544588 OR56A5P0C7T3 313 aa12.83□□□□□ -0.36
CIT-214ENST00000544588 PRKAR1AP10644 381 aa12.83□□□□□ -0.36
CIT-214ENST00000544588 ITGB6P18564 788 aa12.83□□□□□ -0.36
CIT-214ENST00000544588 NELFEP18615 380 aaKnown RBP12.83□□□□□ -0.36
CIT-214ENST00000544588 PDHA2P29803 388 aa12.83□□□□□ -0.36
CIT-214ENST00000544588 CSE1LP55060 971 aaKnown RBP12.83□□□□□ -0.36
CIT-214ENST00000544588 PRKG2Q13237 762 aa12.83□□□□□ -0.36
CIT-214ENST00000544588 KCNAB1Q14722 419 aa12.83□□□□□ -0.36
CIT-214ENST00000544588 SIX1Q15475 284 aaPredicted RBP12.83□□□□□ -0.36
CIT-214ENST00000544588 TRIP13Q15645 432 aaPredicted RBP12.83□□□□□ -0.36
CIT-214ENST00000544588 FASTKD1Q53R41 847 aaKnown RBP12.83□□□□□ -0.36
CIT-214ENST00000544588 LYPLAL1Q5VWZ2 237 aa12.83□□□□□ -0.36
CIT-214ENST00000544588 CAPRIN2Q6IMN6 1127 aaKnown RBP12.83□□□□□ -0.36
CIT-214ENST00000544588 AFTPHQ6ULP2 937 aa12.83□□□□□ -0.36
CIT-214ENST00000544588 NAPRTQ6XQN6 538 aa12.83□□□□□ -0.36
CIT-214ENST00000544588 TIPARPQ7Z3E1 657 aaKnown RBP12.83□□□□□ -0.36
CIT-214ENST00000544588 PPP1R3BQ86XI6 285 aa12.83□□□□□ -0.36
CIT-214ENST00000544588 ZFPM2Q8WW38 1151 aa12.83□□□□□ -0.36
CIT-214ENST00000544588 LCN9Q8WX39 176 aa12.83□□□□□ -0.36
CIT-214ENST00000544588 KLHL6Q8WZ60 621 aa12.83□□□□□ -0.36
CIT-214ENST00000544588 WBP1Q96G27 269 aa12.83□□□□□ -0.36
CIT-214ENST00000544588 RAB33BQ9H082 229 aa12.83□□□□□ -0.36
CIT-214ENST00000544588 TRIT1Q9H3H1 467 aaKnown RBP12.83□□□□□ -0.36
CIT-214ENST00000544588 SRMSQ9H3Y6 488 aa12.83□□□□□ -0.36
CIT-214ENST00000544588 KIR3DX1Q9H7L2 352 aa12.83□□□□□ -0.36
CIT-214ENST00000544588 SOHLH2Q9NX45 425 aa12.83□□□□□ -0.36
CIT-214ENST00000544588 SIDT1Q9NXL6 827 aaKnown RBP12.83□□□□□ -0.36
CIT-214ENST00000544588 RARRES3Q9UL19 164 aa12.83□□□□□ -0.36
CIT-214ENST00000544588 KIF26BQ2KJY2 2108 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 IGLV3-16A0A075B6K0 115 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 F8W8V4 182 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 QSOX1O00391 747 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 OR1I1O60431 355 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 FTH1P02794 183 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 FOLR1P15328 257 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 ZNF28P17035 718 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 CDH3P22223 829 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 FOXN2P32314 431 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 PPARGP37231 505 aaPredicted RBP12.82□□□□□ -0.36
CIT-214ENST00000544588 VPS41P49754 854 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 ACY1Q03154 408 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 BOP1Q14137 746 aaKnown RBP12.82□□□□□ -0.36
CIT-214ENST00000544588 ITIH4Q14624 930 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 IL11RAQ14626 422 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 SYTL3Q4VX76 610 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 PCID2Q5JVF3 399 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 C16orf46Q6P387 395 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 CYB5D1Q6P9G0 228 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 DRICH1Q6PGQ1 229 aaPredicted RBP12.82□□□□□ -0.36
CIT-214ENST00000544588 FBXO38Q6PIJ6 1188 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 C6orf15Q6UXA7 325 aaPredicted RBP12.82□□□□□ -0.36
CIT-214ENST00000544588 NLRP9Q7RTR0 991 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 ESX1Q8N693 406 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 OTUD6BQ8N6M0 293 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 GALNT6Q8NCL4 622 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 ACVR1CQ8NER5 493 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 OR13J1Q8NGT2 312 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 OR4L1Q8NH43 312 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 TFGQ92734 400 aaPredicted RBP12.82□□□□□ -0.36
CIT-214ENST00000544588 STAMBPL1Q96FJ0 436 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 ZNF778Q96MU6 729 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 RANBP9Q96S59 729 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 HGH1Q9BTY7 390 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 EFHD1Q9BUP0 239 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 SEMA4CQ9C0C4 833 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 GRPEL1Q9HAV7 217 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 CHRAC1Q9NRG0 131 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 HOMER3Q9NSC5 361 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 BFARQ9NZS9 450 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 TTC7AQ9ULT0 858 aaPredicted RBP12.82□□□□□ -0.36
CIT-214ENST00000544588 ZKSCAN5Q9Y2L8 839 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 TCAF1Q9Y4C2 921 aa12.82□□□□□ -0.36
CIT-214ENST00000544588 TMEM184BQ9Y519 407 aaPredicted RBP12.82□□□□□ -0.36
CIT-214ENST00000544588 GOLGA6L3A6NEY3 463 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 TLCD2A6NGC4 264 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 ZNF891A8MT65 544 aaPredicted RBP12.81□□□□□ -0.36
CIT-214ENST00000544588 NKX2-8O15522 239 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 KATNA1O75449 491 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 SPAG6O75602 509 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 C1QL1O75973 258 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 CCNYL3P0C7X3 344 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 EBLN1P0CF75 366 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 CD151P48509 253 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 CRADDP78560 199 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 HSD11B2P80365 405 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 ABHD18Q0P651 414 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 RPA4Q13156 261 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 TUBB3Q13509 450 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 TBR1Q16650 682 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 TMTC4Q5T4D3 741 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 XKR5Q6UX68 686 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 C4orf22Q6V702 233 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 CERS6Q6ZMG9 384 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 ZNF605Q86T29 641 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 LDB1Q86U70 411 aaPredicted RBP12.81□□□□□ -0.36
CIT-214ENST00000544588 HOOK3Q86VS8 718 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 ZNF843Q8N446 348 aa12.81□□□□□ -0.36
CIT-214ENST00000544588 MAGOHBQ96A72 148 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms