RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 SLC1A6P48664 564 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 HSF2Q03933 536 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 C1QBPQ07021 282 aaKnown RBP8.77□□□□□ -1.01
VPS13D-212ENST00000543766 ILF2Q12905 390 aaKnown RBP8.77□□□□□ -1.01
VPS13D-212ENST00000543766 AUHQ13825 339 aaKnown RBP8.77□□□□□ -1.01
VPS13D-212ENST00000543766 PCBP2Q15366 365 aaKnown RBP eCLIP8.77□□□□□ -1.01
VPS13D-212ENST00000543766 CEBPEQ15744 281 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 KLHL12Q53G59 568 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 FAM91A1Q658Y4 838 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 NOTUMQ6P988 496 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 DDX53Q86TM3 631 aaKnown RBP8.77□□□□□ -1.01
VPS13D-212ENST00000543766 SLC51AQ86UW1 340 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 LACC1Q8IV20 430 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 RNF148Q8N7C7 305 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 TBC1D15Q8TC07 691 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 ECSITQ9BQ95 431 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 ZNF251Q9BRH9 671 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 PDCD10Q9BUL8 212 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 ZMYND12Q9H0C1 365 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 RBM38Q9H0Z9 239 aaKnown RBP8.77□□□□□ -1.01
VPS13D-212ENST00000543766 METTL8Q9H825 291 aaKnown RBP8.77□□□□□ -1.01
VPS13D-212ENST00000543766 FOLH1BQ9HBA9 442 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 ZNF282Q9UDV7 671 aaPredicted RBP8.77□□□□□ -1.01
VPS13D-212ENST00000543766 SPATA31A6Q5VVP1 1343 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 ITGB4P16144 1822 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 PRAMEF22A3QJZ6 481 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 SOBPA7XYQ1 873 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 POC1B-GALNT4F8VUJ3 575 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 H3BMM5 538 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 SMAD7O15105 426 aaKnown RBP8.77□□□□□ -1.01
VPS13D-212ENST00000543766 MAGEB2O15479 319 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 ZWINTO95229 277 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 AHSA1O95433 338 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 HMGCRP04035 888 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 CRHR1P34998 444 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 IL12RB1P42701 662 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 MED22Q15528 200 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 HKDC1Q2TB90 917 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 YIF1BQ5BJH7 314 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 UBAP2Q5T6F2 1119 aaKnown RBP8.77□□□□□ -1.01
VPS13D-212ENST00000543766 RNF180Q86T96 592 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 FBXW8Q8N3Y1 598 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 TTLL6Q8N841 843 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 ZNF511Q8NB15 262 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 CLP1Q92989 425 aaKnown RBP8.77□□□□□ -1.01
VPS13D-212ENST00000543766 MUL1Q969V5 352 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 FAM84BQ96KN1 310 aaPredicted RBP8.77□□□□□ -1.01
VPS13D-212ENST00000543766 EMILIN3Q9NT22 766 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 PISDQ9UG56 409 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 ABCG2Q9UNQ0 655 aa8.77□□□□□ -1.01
VPS13D-212ENST00000543766 NEURL1BA8MQ27 555 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 TSPAN3O60637 253 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 CBR3O75828 277 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 CYB5R3P00387 301 aaPredicted RBP8.76□□□□□ -1.01
VPS13D-212ENST00000543766 AK1P00568 194 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 ZNF250P15622 560 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 CBR1P16152 277 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 CTSSP25774 331 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 PEX2P28328 305 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 LAP3P28838 519 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 ACAA2P42765 397 aaKnown RBP8.76□□□□□ -1.01
VPS13D-212ENST00000543766 BDH1Q02338 343 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 TAF1AQ15573 450 aaPredicted RBP8.76□□□□□ -1.01
VPS13D-212ENST00000543766 NEDD8Q15843 81 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 USP30Q70CQ3 517 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 CROCCP2Q86T23 111 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 ZDHHC14Q8IZN3 488 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 TMEM35BQ8NCS4 154 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 TRPV1Q8NER1 839 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 TMEM74Q96NL1 305 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 DHRS4Q9BTZ2 278 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 FAM207AQ9NSI2 230 aaPredicted RBP8.76□□□□□ -1.01
VPS13D-212ENST00000543766 ZDHHC7Q9NXF8 308 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 AGO1Q9UL18 857 aaKnown RBP8.76□□□□□ -1.01
VPS13D-212ENST00000543766 OGTO15294 1046 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 DDAH1O94760 285 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 ZNF25P17030 456 aaPredicted RBP8.76□□□□□ -1.01
VPS13D-212ENST00000543766 RAB13P51153 203 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 NAPAP54920 295 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 MERTKQ12866 999 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 BNIP3Q12983 259 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 IL24Q13007 206 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 PTPRRQ15256 657 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 TOR1AIP1Q5JTV8 583 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 KHDRBS2Q5VWX1 349 aaKnown RBP8.76□□□□□ -1.01
VPS13D-212ENST00000543766 GPR153Q6NV75 609 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 FUT10Q6P4F1 479 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 SNX29P2Q8IUI4 249 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 RGL4Q8IZJ4 473 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 TCP10LQ8TDR4 215 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 C22orf15Q8WYQ4 148 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 C18orf8Q96DM3 657 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 SH3YL1Q96HL8 342 aaPredicted RBP8.76□□□□□ -1.01
VPS13D-212ENST00000543766 PHOX2BQ99453 314 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 DPYSL5Q9BPU6 564 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 SLC19A3Q9BZV2 496 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 ARHGAP39Q9C0H5 1083 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 METTL7AQ9H8H3 244 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 POLE4Q9NR33 117 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 PLSCR4Q9NRQ2 329 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms