RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 ATAD1Q8NBU5 361 aa10.6□□□□□ -0.71
GABRB3-204ENST00000541819 CCDC107Q8WV48 283 aa10.6□□□□□ -0.71
GABRB3-204ENST00000541819 UPF1Q92900 1129 aaKnown RBP eCLIP10.6□□□□□ -0.71
GABRB3-204ENST00000541819 LRRC46Q96FV0 321 aa10.6□□□□□ -0.71
GABRB3-204ENST00000541819 TBL1XR1Q9BZK7 514 aa10.6□□□□□ -0.71
GABRB3-204ENST00000541819 B3GNT4Q9C0J1 378 aa10.6□□□□□ -0.71
GABRB3-204ENST00000541819 SLC6A15Q9H2J7 730 aa10.6□□□□□ -0.71
GABRB3-204ENST00000541819 ELAC1Q9H777 363 aaKnown RBP10.6□□□□□ -0.71
GABRB3-204ENST00000541819 TBC1D17Q9HA65 648 aa10.6□□□□□ -0.71
GABRB3-204ENST00000541819 CIDEBQ9UHD4 219 aa10.6□□□□□ -0.71
GABRB3-204ENST00000541819 TCRBV9S1A1TA0A576 114 aa10.6□□□□□ -0.71
GABRB3-204ENST00000541819 TSPAN1O60635 241 aa10.6□□□□□ -0.71
GABRB3-204ENST00000541819 TACSTD2P09758 323 aa10.6□□□□□ -0.71
GABRB3-204ENST00000541819 S100A2P29034 98 aa10.6□□□□□ -0.71
GABRB3-204ENST00000541819 HCAR3P49019 387 aa10.6□□□□□ -0.71
GABRB3-204ENST00000541819 FMO1Q01740 532 aa10.6□□□□□ -0.71
GABRB3-204ENST00000541819 KLHL22Q53GT1 634 aa10.6□□□□□ -0.71
GABRB3-204ENST00000541819 IL23RQ5VWK5 629 aa10.6□□□□□ -0.71
GABRB3-204ENST00000541819 REP15Q6BDI9 236 aa10.6□□□□□ -0.71
GABRB3-204ENST00000541819 TMEM220Q6QAJ8 160 aa10.6□□□□□ -0.71
GABRB3-204ENST00000541819 USP30Q70CQ3 517 aa10.6□□□□□ -0.71
GABRB3-204ENST00000541819 SLC29A4Q7RTT9 530 aa10.6□□□□□ -0.71
GABRB3-204ENST00000541819 CMC1Q7Z7K0 106 aa10.6□□□□□ -0.71
GABRB3-204ENST00000541819 TSTD1Q8NFU3 115 aa10.6□□□□□ -0.71
GABRB3-204ENST00000541819 CPNE2Q96FN4 548 aaPredicted RBP10.6□□□□□ -0.71
GABRB3-204ENST00000541819 TBATAQ96M53 351 aa10.6□□□□□ -0.71
GABRB3-204ENST00000541819 EBPLQ9BY08 206 aa10.6□□□□□ -0.71
GABRB3-204ENST00000541819 GBA3Q9H227 469 aa10.6□□□□□ -0.71
GABRB3-204ENST00000541819 DDX4Q9NQI0 724 aaKnown RBP10.6□□□□□ -0.71
GABRB3-204ENST00000541819 GDAP2Q9NXN4 497 aa10.6□□□□□ -0.71
GABRB3-204ENST00000541819 ASTN1O14525 1302 aa10.6□□□□□ -0.71
GABRB3-204ENST00000541819 MAGEB17A8MXT2 336 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 SPATA31C2B4DYI2 1134 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 ENTPD5O75356 428 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 IFNA21P01568 189 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 BPGMP07738 259 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 NR2C1P13056 603 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 CHIT1Q13231 466 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 ARFRP1Q13795 201 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 OCLNQ16625 522 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 TEX44Q53QW1 395 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 TTMPQ5BVD1 217 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 IDNKQ5T6J7 187 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 DNM1P34Q6PK57 102 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 SLC24A5Q71RS6 500 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 DNAJB7Q7Z6W7 309 aaPredicted RBP10.59□□□□□ -0.71
GABRB3-204ENST00000541819 CREG2Q8IUH2 290 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 OR8H1Q8NGG4 311 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 GTPBP3Q969Y2 492 aaKnown RBP10.59□□□□□ -0.71
GABRB3-204ENST00000541819 SLC25A36Q96CQ1 311 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 MECRQ9BV79 373 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 ZNF471Q9BX82 626 aaPredicted RBP10.59□□□□□ -0.71
GABRB3-204ENST00000541819 LDAHQ9H6V9 325 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 PCDHGC3Q9UN70 934 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 IFT52Q9Y366 437 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 PMF1-BGLAPU3KQ54 211 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 B4GALT5O43286 388 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 ITGA10O75578 1167 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 TPSB2P20231 275 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 RBM34P42696 430 aaKnown RBP10.59□□□□□ -0.71
GABRB3-204ENST00000541819 HSPA7P48741 367 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 GBX2P52951 348 aaPredicted RBP10.59□□□□□ -0.71
GABRB3-204ENST00000541819 SNTA1Q13424 505 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 TPSAB1Q15661 275 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 SLC1A5Q15758 541 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 IFI44LQ53G44 452 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 NT5DC1Q5TFE4 455 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 SLC26A9Q7LBE3 791 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 OTOP3Q7RTS5 596 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 GHDCQ8N2G8 530 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 CERS4Q9HA82 394 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 MED11Q9P086 117 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 TEX13CA0A0J9YWL9 993 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 DAPL1A0PJW8 107 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 ZNF878C9JN71 531 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 TNFRSF10BO14763 440 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 CPNE3O75131 537 aaKnown RBP10.59□□□□□ -0.71
GABRB3-204ENST00000541819 ANGPTL1O95841 491 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 COL6A1P12109 1028 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 NCK1P16333 377 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 NELFEP18615 380 aaKnown RBP10.59□□□□□ -0.71
GABRB3-204ENST00000541819 ATF6P18850 670 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 MAT2AP31153 395 aaKnown RBP10.59□□□□□ -0.71
GABRB3-204ENST00000541819 CRHR1P34998 444 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 HSD17B2P37059 387 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 SLC5A3P53794 718 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 AHSA2Q719I0 299 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 TSEN2Q8NCE0 465 aaKnown RBP10.59□□□□□ -0.71
GABRB3-204ENST00000541819 DGAT2Q96PD7 388 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 GAL3ST1Q99999 423 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 COPS4Q9BT78 406 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 C14orf105Q9NVL8 296 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 ETAA1Q9NY74 926 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 CORO1CQ9ULV4 474 aaPredicted RBP10.59□□□□□ -0.71
GABRB3-204ENST00000541819 PEX16Q9Y5Y5 336 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 IQGAP3Q86VI3 1631 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 PLOD2O00469 737 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 TM7SF2O76062 418 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 GADD45GO95257 159 aa10.59□□□□□ -0.71
GABRB3-204ENST00000541819 MMP3P08254 477 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms