RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 ZNF599Q96NL3 588 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 TCF12Q99081 682 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 SEZ6LQ9BYH1 1024 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 RAB23Q9ULC3 237 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 CLEC4EQ9ULY5 219 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 OR1A2Q9Y585 309 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 CLOCKO15516 846 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 TSPAN6O43657 245 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 FKBP6O75344 327 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 PRAMEF12O95522 483 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 FGF19O95750 216 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 NUDT14O95848 222 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 S1PR4O95977 384 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 VIPP01282 170 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 MTHFD1P11586 935 aaKnown RBP9.39□□□□□ -0.91
TTC39C-203ENST00000540918 ANPEPP15144 967 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 ALDH4A1P30038 563 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 POLR2JP52435 117 aaKnown RBP9.39□□□□□ -0.91
TTC39C-203ENST00000540918 SLC18A2Q05940 514 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 MAD2L1Q13257 205 aaPredicted RBP9.39□□□□□ -0.91
TTC39C-203ENST00000540918 NFATC2Q13469 925 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 GRIN2CQ14957 1233 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 TGFBIQ15582 683 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 RAB41Q5JT25 222 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 WASHC2DQ5SRD0 308 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 SLC8B1Q6J4K2 584 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 TXNDC11Q6PKC3 985 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 BNIPLQ7Z465 357 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 TREML1Q86YW5 311 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 OR52J3Q8NH60 311 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 WFDC5Q8TCV5 224 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 LCN9Q8WX39 176 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 MYEOVQ96EZ4 313 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 TPSD1Q9BZJ3 242 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 COMMD8Q9NX08 183 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 RNF11Q9Y3C5 154 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 LINC00854A0A1B0GVQ3 168 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 HHLA1C9JL84 531 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 HOXD8P13378 290 aaPredicted RBP9.39□□□□□ -0.91
TTC39C-203ENST00000540918 OGNP20774 298 aaKnown RBP9.39□□□□□ -0.91
TTC39C-203ENST00000540918 HYAL2Q12891 473 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 SLC44A4Q53GD3 710 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 YTHDF3Q7Z739 585 aaKnown RBP9.39□□□□□ -0.91
TTC39C-203ENST00000540918 TCEAL8Q8IYN2 117 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 KRT78Q8N1N4 520 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 ZNF276Q8N554 614 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 OR4F6Q8NGB9 312 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 FGF13Q92913 245 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 WDR26Q9H7D7 661 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 CHCHD3Q9NX63 227 aaKnown RBP9.39□□□□□ -0.91
TTC39C-203ENST00000540918 ERVW-1Q9UQF0 538 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 C15orf41Q9Y2V0 281 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 SPACA6W5XKT8 324 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 SCN1AP35498 2009 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 KAT7O95251 611 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 FGF3P11487 239 aaPredicted RBP9.38□□□□□ -0.91
TTC39C-203ENST00000540918 IDO1P14902 403 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 TCEA1P23193 301 aaKnown RBP9.38□□□□□ -0.91
TTC39C-203ENST00000540918 HLA-FP30511 346 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 MANFP55145 182 aaKnown RBP9.38□□□□□ -0.91
TTC39C-203ENST00000540918 HSPB3Q12988 150 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 CCNYL2Q5T2Q4 361 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 CPSF7Q8N684 471 aaKnown RBP9.38□□□□□ -0.91
TTC39C-203ENST00000540918 CATSPER1Q8NEC5 780 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 FAM110BQ8TC76 370 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 TMEM74Q96NL1 305 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 SH3GL1Q99961 368 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 YIPF4Q9BSR8 244 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 RC3H2Q9HBD1 1191 aaKnown RBP9.38□□□□□ -0.91
TTC39C-203ENST00000540918 ZDHHC3Q9NYG2 299 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 CEP250Q9BV73 2442 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 NPIPB15A6NHN6 443 aaPredicted RBP9.38□□□□□ -0.91
TTC39C-203ENST00000540918 GLOD5A6NK44 160 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 TPST2O60704 377 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 ALPPL2P10696 532 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 SRCP12931 536 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 ATP1B2P14415 290 aaPredicted RBP9.38□□□□□ -0.91
TTC39C-203ENST00000540918 ZNF37AP17032 561 aaPredicted RBP9.38□□□□□ -0.91
TTC39C-203ENST00000540918 TYRP1P17643 537 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 IMPDH1P20839 514 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 RFC2P35250 354 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 HERVK_113P63132 956 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 DGCR6Q14129 220 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 UAP1L1Q3KQV9 507 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 C2CD4AQ8NCU7 369 aaPredicted RBP9.38□□□□□ -0.91
TTC39C-203ENST00000540918 OR52B6Q8NGF0 335 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 OR5AK3PQ8NH89 298 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 WDR60Q8WVS4 1066 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 ERVK-6Q9BXR3 956 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 OR51B5Q9H339 312 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 EBF2Q9HAK2 575 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 DNMT3BQ9UBC3 853 aaKnown RBP9.38□□□□□ -0.91
TTC39C-203ENST00000540918 COPG1Q9Y678 874 aaKnown RBP9.38□□□□□ -0.91
TTC39C-203ENST00000540918 IGLON5A6NGN9 336 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 RPS7P62081 194 aaKnown RBP9.38□□□□□ -0.91
TTC39C-203ENST00000540918 TMEM115Q12893 351 aaPredicted RBP9.38□□□□□ -0.91
TTC39C-203ENST00000540918 LYPLAL1Q5VWZ2 237 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 CYP2U1Q7Z449 544 aa9.38□□□□□ -0.91
TTC39C-203ENST00000540918 ZNF761Q86XN6 746 aaPredicted RBP9.38□□□□□ -0.91
TTC39C-203ENST00000540918 MICU2Q8IYU8 434 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms