RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 TTI1O43156 1089 aa16.47■□□□□ 0.23
CD9-209ENST00000540891 ITGB6P18564 788 aa16.47■□□□□ 0.23
CD9-209ENST00000540891 ITPKBP27987 946 aa16.47■□□□□ 0.23
CD9-209ENST00000540891 ACADLP28330 430 aa16.47■□□□□ 0.23
CD9-209ENST00000540891 CASQ1P31415 396 aa16.47■□□□□ 0.23
CD9-209ENST00000540891 SLC5A2P31639 672 aa16.47■□□□□ 0.23
CD9-209ENST00000540891 CCR7P32248 378 aa16.47■□□□□ 0.23
CD9-209ENST00000540891 PPARGP37231 505 aaPredicted RBP16.47■□□□□ 0.23
CD9-209ENST00000540891 CD151P48509 253 aa16.47■□□□□ 0.23
CD9-209ENST00000540891 MAPK10P53779 464 aa16.47■□□□□ 0.23
CD9-209ENST00000540891 DHX34Q14147 1143 aaKnown RBP16.47■□□□□ 0.23
CD9-209ENST00000540891 BRD3Q15059 726 aa16.47■□□□□ 0.23
CD9-209ENST00000540891 SYDE1Q6ZW31 735 aaPredicted RBP16.47■□□□□ 0.23
CD9-209ENST00000540891 PDZD3Q86UT5 571 aa16.47■□□□□ 0.23
CD9-209ENST00000540891 HOOK3Q86VS8 718 aa16.47■□□□□ 0.23
CD9-209ENST00000540891 KRT222Q8N1A0 295 aa16.47■□□□□ 0.23
CD9-209ENST00000540891 ZNF248Q8NDW4 579 aa16.47■□□□□ 0.23
CD9-209ENST00000540891 USP7Q93009 1102 aa16.47■□□□□ 0.23
CD9-209ENST00000540891 ZNF669Q96BR6 464 aaPredicted RBP16.47■□□□□ 0.23
CD9-209ENST00000540891 RUNDC3BQ96NL0 473 aa16.47■□□□□ 0.23
CD9-209ENST00000540891 TGM7Q96PF1 710 aa16.47■□□□□ 0.23
CD9-209ENST00000540891 NRTNQ99748 197 aa16.47■□□□□ 0.23
CD9-209ENST00000540891 CARD6Q9BX69 1037 aa16.47■□□□□ 0.23
CD9-209ENST00000540891 RAB33BQ9H082 229 aa16.47■□□□□ 0.23
CD9-209ENST00000540891 FOXJ2Q9P0K8 574 aa16.47■□□□□ 0.23
CD9-209ENST00000540891 AKAP7Q9P0M2 348 aaPredicted RBP16.47■□□□□ 0.23
CD9-209ENST00000540891 SAMD15Q9P1V8 674 aa16.47■□□□□ 0.23
CD9-209ENST00000540891 EPHA6Q9UF33 1036 aa16.47■□□□□ 0.23
CD9-209ENST00000540891 CDYLQ9Y232 598 aa16.47■□□□□ 0.23
CD9-209ENST00000540891 ZFHX4Q86UP3 3567 aa16.47■□□□□ 0.23
CD9-209ENST00000540891 TP73O15350 636 aa16.46■□□□□ 0.23
CD9-209ENST00000540891 NVLO15381 856 aaKnown RBP16.46■□□□□ 0.23
CD9-209ENST00000540891 KIF1CO43896 1103 aaKnown RBP16.46■□□□□ 0.23
CD9-209ENST00000540891 PRAMEF10O60809 474 aa16.46■□□□□ 0.23
CD9-209ENST00000540891 BANF1O75531 89 aa16.46■□□□□ 0.23
CD9-209ENST00000540891 ANKRD34CP0C6C1 535 aa16.46■□□□□ 0.23
CD9-209ENST00000540891 RPS3P23396 243 aaKnown RBP eCLIP16.46■□□□□ 0.23
CD9-209ENST00000540891 CSTF2P33240 577 aaKnown RBP eCLIP16.46■□□□□ 0.23
CD9-209ENST00000540891 BOP1Q14137 746 aaKnown RBP16.46■□□□□ 0.23
CD9-209ENST00000540891 PLCL1Q15111 1095 aa16.46■□□□□ 0.23
CD9-209ENST00000540891 MSS51Q4VC12 460 aa16.46■□□□□ 0.23
CD9-209ENST00000540891 CTSL3PQ5NE16 218 aa16.46■□□□□ 0.23
CD9-209ENST00000540891 CENPUQ71F23 418 aa16.46■□□□□ 0.23
CD9-209ENST00000540891 PCGF5Q86SE9 256 aa16.46■□□□□ 0.23
CD9-209ENST00000540891 PHC3Q8NDX5 983 aa16.46■□□□□ 0.23
CD9-209ENST00000540891 HNRNPLLQ8WVV9 542 aaKnown RBP16.46■□□□□ 0.23
CD9-209ENST00000540891 LPGAT1Q92604 370 aa16.46■□□□□ 0.23
CD9-209ENST00000540891 NAF1Q96HR8 494 aaKnown RBP16.46■□□□□ 0.23
CD9-209ENST00000540891 FERD3LQ96RJ6 166 aa16.46■□□□□ 0.23
CD9-209ENST00000540891 KRT12Q99456 494 aa16.46■□□□□ 0.23
CD9-209ENST00000540891 ACSL6Q9UKU0 697 aa16.46■□□□□ 0.23
CD9-209ENST00000540891 HEBP2Q9Y5Z4 205 aa16.46■□□□□ 0.23
CD9-209ENST00000540891 RPS6KL1Q9Y6S9 549 aa16.46■□□□□ 0.23
CD9-209ENST00000540891 COLEC10Q9Y6Z7 277 aa16.46■□□□□ 0.23
CD9-209ENST00000540891 CACNA1BQ00975 2339 aa16.46■□□□□ 0.23
CD9-209ENST00000540891 PKD1L2Q7Z442 2459 aa16.45■□□□□ 0.22
CD9-209ENST00000540891 EFCAB7A8K855 629 aa16.45■□□□□ 0.22
CD9-209ENST00000540891 B4E171 279 aa16.45■□□□□ 0.22
CD9-209ENST00000540891 IFRD1O00458 451 aaPredicted RBP16.45■□□□□ 0.22
CD9-209ENST00000540891 GPC4O75487 556 aa16.45■□□□□ 0.22
CD9-209ENST00000540891 NDUFS3O75489 264 aa16.45■□□□□ 0.22
CD9-209ENST00000540891 USP1O94782 785 aa16.45■□□□□ 0.22
CD9-209ENST00000540891 F7P08709 466 aaPredicted RBP16.45■□□□□ 0.22
CD9-209ENST00000540891 PAMP19021 973 aa16.45■□□□□ 0.22
CD9-209ENST00000540891 OGNP20774 298 aaKnown RBP16.45■□□□□ 0.22
CD9-209ENST00000540891 NDUFS1P28331 727 aa16.45■□□□□ 0.22
CD9-209ENST00000540891 TSPAN7P41732 249 aa16.45■□□□□ 0.22
CD9-209ENST00000540891 DHX9Q08211 1270 aaKnown RBP16.45■□□□□ 0.22
CD9-209ENST00000540891 ZNF789Q5FWF6 425 aa16.45■□□□□ 0.22
CD9-209ENST00000540891 MRNIPQ6NTE8 343 aa16.45■□□□□ 0.22
CD9-209ENST00000540891 HIBCHQ6NVY1 386 aaPredicted RBP16.45■□□□□ 0.22
CD9-209ENST00000540891 NEPROQ6NW34 567 aa16.45■□□□□ 0.22
CD9-209ENST00000540891 IRGCQ6NXR0 463 aa16.45■□□□□ 0.22
CD9-209ENST00000540891 C19orf48Q6RUI8 117 aa16.45■□□□□ 0.22
CD9-209ENST00000540891 CILP2Q8IUL8 1156 aa16.45■□□□□ 0.22
CD9-209ENST00000540891 VRK3Q8IV63 474 aa16.45■□□□□ 0.22
CD9-209ENST00000540891 SPACA3Q8IXA5 215 aa16.45■□□□□ 0.22
CD9-209ENST00000540891 OTUD6BQ8N6M0 293 aa16.45■□□□□ 0.22
CD9-209ENST00000540891 ACVR1CQ8NER5 493 aa16.45■□□□□ 0.22
CD9-209ENST00000540891 SPATA4Q8NEY3 305 aa16.45■□□□□ 0.22
CD9-209ENST00000540891 TFGQ92734 400 aaPredicted RBP16.45■□□□□ 0.22
CD9-209ENST00000540891 PWWP2AQ96N64 755 aa16.45■□□□□ 0.22
CD9-209ENST00000540891 BIRC8Q96P09 236 aa16.45■□□□□ 0.22
CD9-209ENST00000540891 ZNF768Q9H5H4 540 aaKnown RBP16.45■□□□□ 0.22
CD9-209ENST00000540891 SIDT1Q9NXL6 827 aaKnown RBP16.45■□□□□ 0.22
CD9-209ENST00000540891 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.45■□□□□ 0.22
CD9-209ENST00000540891 PCDHGA3Q9Y5H0 932 aa16.45■□□□□ 0.22
CD9-209ENST00000540891 MAD1L1Q9Y6D9 718 aa16.45■□□□□ 0.22
CD9-209ENST00000540891 ANKRD11Q6UB99 2663 aaPredicted RBP16.45■□□□□ 0.22
CD9-209ENST00000540891 OR5K3A6NET4 321 aa16.44■□□□□ 0.22
CD9-209ENST00000540891 TOX3O15405 576 aaPredicted RBP16.44■□□□□ 0.22
CD9-209ENST00000540891 RRP8O43159 456 aaKnown RBP16.44■□□□□ 0.22
CD9-209ENST00000540891 AOAHP28039 575 aa16.44■□□□□ 0.22
CD9-209ENST00000540891 CSE1LP55060 971 aaKnown RBP16.44■□□□□ 0.22
CD9-209ENST00000540891 EIF3BP55884 814 aaKnown RBP16.44■□□□□ 0.22
CD9-209ENST00000540891 MRPS25P82663 173 aaKnown RBP16.44■□□□□ 0.22
CD9-209ENST00000540891 PLOD1Q02809 727 aaPredicted RBP16.44■□□□□ 0.22
CD9-209ENST00000540891 TLE3Q04726 772 aa16.44■□□□□ 0.22
CD9-209ENST00000540891 MORF4L2Q15014 288 aa16.44■□□□□ 0.22
CD9-209ENST00000540891 SYTL3Q4VX76 610 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms