RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 NELFEP18615 380 aaKnown RBP4.52□□□□□ -1.69
SNHG1-214ENST00000540865 PAMP19021 973 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 ENDOUP21128 410 aaKnown RBP4.52□□□□□ -1.69
SNHG1-214ENST00000540865 HOXC12P31275 282 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 VIPR1P32241 457 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 KRT9P35527 623 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 FLT3P36888 993 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 PRCPP42785 496 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 SYKP43405 635 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 GLRBP48167 497 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 GFERP55789 205 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 UBE2IP63279 158 aaKnown RBP4.52□□□□□ -1.69
SNHG1-214ENST00000540865 CHRNEQ04844 493 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 DPTQ07507 201 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 BCL2L1Q07817 233 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 NSUN2Q08J23 767 aaKnown RBP eCLIP4.52□□□□□ -1.69
SNHG1-214ENST00000540865 CNGA3Q16281 694 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 KCNMB1Q16558 191 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 ZNF630Q2M218 657 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-214ENST00000540865 CCDC40Q4G0X9 1142 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 VWA2Q5GFL6 755 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 MIIPQ5JXC2 388 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 FAM102AQ5T9C2 384 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-214ENST00000540865 FAM72AQ5TYM5 149 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 FAM72DQ6L9T8 149 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 FAM199XQ6PEV8 388 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-214ENST00000540865 DOK6Q6PKX4 331 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 ZNF517Q6ZMY9 492 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-214ENST00000540865 Q6ZS92 163 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 SRLQ86TD4 932 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 KCNMB4Q86W47 210 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 FAM72BQ86X60 149 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 GALNT13Q8IUC8 556 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 SPPL2CQ8IUH8 684 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 MMP21Q8N119 569 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 UMODL1-AS1Q8N2C9 162 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 ZADH2Q8N4Q0 377 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 PAF1Q8N7H5 531 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 RTL3Q8N8U3 475 aaKnown RBP4.52□□□□□ -1.69
SNHG1-214ENST00000540865 FAM168AQ92567 244 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 INPP5DQ92835 1189 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 RELTQ969Z4 430 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 C18orf8Q96DM3 657 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 ZDHHC12Q96GR4 267 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 SGSM3Q96HU1 749 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 SLC41A2Q96JW4 573 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 CFAP57Q96MR6 1250 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 AGAP3Q96P47 875 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 TGM7Q96PF1 710 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 AKIRIN1Q9H9L7 192 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-214ENST00000540865 PDFQ9HBH1 243 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 RMND1Q9NWS8 449 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 OGFRQ9NZT2 677 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 SEMA5BQ9P283 1151 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 TBC1D29Q9UFV1 150 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 RARRES3Q9UL19 164 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 NTNG1Q9Y2I2 539 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 TMEM98Q9Y2Y6 226 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 NBEAL1Q6ZS30 2694 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 LRP4O75096 1905 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 TRAV20A0A0B4J274 112 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-214ENST00000540865 GOLGA6CA6NDK9 693 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 GOLGA6BA6NDN3 693 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 ZNF503-AS2A6NEH8 195 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 A8MX80 341 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 F5H423 210 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-214ENST00000540865 BIN1O00499 593 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 KIF1CO43896 1103 aaKnown RBP4.51□□□□□ -1.69
SNHG1-214ENST00000540865 PRAMEF11O60813 436 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 SOD1P00441 154 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 IGHEP01854 428 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 SCG5P05408 212 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 PYGLP06737 847 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 GOLGA6DP0CG33 693 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 CYP2A6P11509 494 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-214ENST00000540865 F3P13726 295 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 TYRP1P17643 537 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 AMD1P17707 334 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 XRCC1P18887 633 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-214ENST00000540865 TACR1P25103 407 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 HTR1EP28566 365 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 EPHB2P29323 1055 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 HNRNPH3P31942 346 aaKnown RBP4.51□□□□□ -1.69
SNHG1-214ENST00000540865 CDH5P33151 784 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-214ENST00000540865 USP8P40818 1118 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 TSFMP43897 325 aaKnown RBP4.51□□□□□ -1.69
SNHG1-214ENST00000540865 GPR1P46091 355 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 RGRP47804 291 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 CLCNKAP51800 687 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 NDUFA8P51970 172 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 GSDMDP57764 484 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 AP1S1P61966 158 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 ACY1Q03154 408 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 TUBB3Q13509 450 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 MYBPC3Q14896 1274 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 SMTNL2Q2TAL5 461 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 FAM209AQ5JX71 171 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 LCE5AQ5TCM9 118 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 ZNF658Q5TYW1 1059 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms