RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 PWWP2BQ6NUJ5 590 aa12.77□□□□□ -0.37
SEMA4D-223ENST00000540475 DUS1LQ6P1R4 473 aaKnown RBP12.77□□□□□ -0.37
SEMA4D-223ENST00000540475 SERPINA9Q86WD7 417 aa12.77□□□□□ -0.37
SEMA4D-223ENST00000540475 OOSP2Q86WS3 158 aa12.77□□□□□ -0.37
SEMA4D-223ENST00000540475 RASGRP3Q8IV61 690 aa12.77□□□□□ -0.37
SEMA4D-223ENST00000540475 SIDT2Q8NBJ9 832 aaKnown RBP12.77□□□□□ -0.37
SEMA4D-223ENST00000540475 ACVR1CQ8NER5 493 aa12.77□□□□□ -0.37
SEMA4D-223ENST00000540475 OR8K5Q8NH50 307 aa12.77□□□□□ -0.37
SEMA4D-223ENST00000540475 NAT14Q8WUY8 206 aa12.77□□□□□ -0.37
SEMA4D-223ENST00000540475 TMEM121Q9BTD3 319 aa12.77□□□□□ -0.37
SEMA4D-223ENST00000540475 TFB2MQ9H5Q4 396 aaKnown RBP12.77□□□□□ -0.37
SEMA4D-223ENST00000540475 COG4Q9H9E3 785 aa12.77□□□□□ -0.37
SEMA4D-223ENST00000540475 LHX9Q9NQ69 397 aa12.77□□□□□ -0.37
SEMA4D-223ENST00000540475 LATS2Q9NRM7 1088 aa12.77□□□□□ -0.37
SEMA4D-223ENST00000540475 KCND3Q9UK17 655 aa12.77□□□□□ -0.37
SEMA4D-223ENST00000540475 CROTQ9UKG9 612 aa12.77□□□□□ -0.37
SEMA4D-223ENST00000540475 RARRES3Q9UL19 164 aa12.77□□□□□ -0.37
SEMA4D-223ENST00000540475 RIMKLBQ9ULI2 386 aa12.77□□□□□ -0.37
SEMA4D-223ENST00000540475 CAPN6Q9Y6Q1 641 aa12.77□□□□□ -0.37
SEMA4D-223ENST00000540475 C21orf140B9A014 251 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 MATN2O00339 956 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 CCL22O00626 93 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 WISP1O95388 367 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 CCNYL3P0C7X3 344 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 TPH1P17752 444 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 KPNA2P52292 529 aaKnown RBP12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 TUBB4BP68371 445 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 CACNG1Q06432 222 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 TUBB3Q13509 450 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 LAMB3Q13751 1172 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 TUBB2AQ13885 445 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 ITIH4Q14624 930 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 PLCL1Q15111 1095 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 DNTTIP2Q5QJE6 756 aaKnown RBP12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 PACS1Q6VY07 963 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 ATG14Q6ZNE5 492 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 LINC00523Q86TU6 105 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 PIANPQ8IYJ0 282 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 APOBEC4Q8WW27 367 aaKnown RBP12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 ZNF501Q96CX3 271 aaPredicted RBP12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 STAMBPL1Q96FJ0 436 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 SGSM3Q96HU1 749 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 LRFN5Q96NI6 719 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 DESI2Q9BSY9 194 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 TUBB2BQ9BVA1 445 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 VPS37BQ9H9H4 285 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 SYTL2Q9HCH5 934 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 C1GALT1Q9NS00 363 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 FGF21Q9NSA1 209 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 POMT2Q9UKY4 750 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 MRPS18BQ9Y676 258 aaKnown RBP12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 KCNMB2Q9Y691 235 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 COL12A1Q99715 3063 aa12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 SNRNP200O75643 2136 aaKnown RBP12.76□□□□□ -0.37
SEMA4D-223ENST00000540475 UBA6A0AVT1 1052 aaPredicted RBP12.75□□□□□ -0.37
SEMA4D-223ENST00000540475 OR6C74A6NCV1 312 aa12.75□□□□□ -0.37
SEMA4D-223ENST00000540475 LIASO43766 372 aa12.75□□□□□ -0.37
SEMA4D-223ENST00000540475 POLBP06746 335 aa12.75□□□□□ -0.37
SEMA4D-223ENST00000540475 FURINP09958 794 aa12.75□□□□□ -0.37
SEMA4D-223ENST00000540475 EBLN1P0CF75 366 aa12.75□□□□□ -0.37
SEMA4D-223ENST00000540475 PRSS56P0CW18 603 aa12.75□□□□□ -0.37
SEMA4D-223ENST00000540475 NSG1P42857 185 aa12.75□□□□□ -0.37
SEMA4D-223ENST00000540475 CSRP3P50461 194 aa12.75□□□□□ -0.37
SEMA4D-223ENST00000540475 ACVR1Q04771 509 aa12.75□□□□□ -0.37
SEMA4D-223ENST00000540475 BOP1Q14137 746 aaKnown RBP12.75□□□□□ -0.37
SEMA4D-223ENST00000540475 FLNCQ14315 2725 aa12.75□□□□□ -0.37
SEMA4D-223ENST00000540475 KCNAB1Q14722 419 aa12.75□□□□□ -0.37
SEMA4D-223ENST00000540475 POU6F1Q14863 301 aa12.75□□□□□ -0.37
SEMA4D-223ENST00000540475 SKIDA1Q1XH10 827 aa12.75□□□□□ -0.37
SEMA4D-223ENST00000540475 CERS6Q6ZMG9 384 aa12.75□□□□□ -0.37
SEMA4D-223ENST00000540475 ZNF662Q6ZS27 426 aa12.75□□□□□ -0.37
SEMA4D-223ENST00000540475 PEX13Q92968 403 aa12.75□□□□□ -0.37
SEMA4D-223ENST00000540475 RANBP9Q96S59 729 aa12.75□□□□□ -0.37
SEMA4D-223ENST00000540475 GPR87Q9BY21 358 aa12.75□□□□□ -0.37
SEMA4D-223ENST00000540475 PITPNM3Q9BZ71 974 aa12.75□□□□□ -0.37
SEMA4D-223ENST00000540475 MVB12BQ9H7P6 319 aa12.75□□□□□ -0.37
SEMA4D-223ENST00000540475 HEMK1Q9Y5R4 338 aaPredicted RBP12.75□□□□□ -0.37
SEMA4D-223ENST00000540475 QSOX1O00391 747 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 LIN7AO14910 233 aaPredicted RBP12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 CREG1O75629 220 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 ZIC2O95409 532 aaPredicted RBP12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 PRKAR1AP10644 381 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 ACADLP28330 430 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 PDHA2P29803 388 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 PRDX3P30048 256 aaKnown RBP12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 FOXN2P32314 431 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 NFKB2Q00653 900 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 KCNC4Q03721 635 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 CDH17Q12864 832 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 SEMA5AQ13591 1074 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 DNASE1L3Q13609 305 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 GSE1Q14687 1217 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 DBN1Q16643 649 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 DEFB109BQ30KR1 87 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 ZRANB3Q5FWF4 1079 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 ZNF789Q5FWF6 425 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 MICALCLQ6ZW33 695 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 PRICKLE2Q7Z3G6 844 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 SLC13A5Q86YT5 568 aaPredicted RBP12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 APLFQ8IW19 511 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms