RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 WSCD1Q658N2 575 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 ZDHHC24Q6UX98 284 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 FKBP9P1Q75LS8 142 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 PRR18Q8N4B5 295 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 SMRP1Q8NCR6 262 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 DTX3LQ8TDB6 740 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 SENP8Q96LD8 212 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 ADAM2Q99965 735 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 TUBB6Q9BUF5 446 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 SMOC2Q9H3U7 446 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 NPHS2Q9NP85 383 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 UFSP2Q9NUQ7 469 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 TAS2R1Q9NYW7 299 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 COL4A6Q14031 1691 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 CACNA1BQ00975 2339 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 A0A0U1RQF3 1178 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 NDUFS8O00217 210 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 PAPSS1O43252 624 aaPredicted RBP12.41□□□□□ -0.42
DDX55-206ENST00000539934 CBR3O75828 277 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 T-ENOLP0DO92 83 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 BMP2P12643 396 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 LCP1P13796 627 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 AVPR2P30518 371 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 SDC4P31431 198 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 TPMTP51580 245 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 ITGA8P53708 1063 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 ITGADQ13349 1161 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 PTK6Q13882 451 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 VEPH1Q14D04 833 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 KRTCAP3Q53RY4 240 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 ITPRIPL1Q6GPH6 555 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 ZNF574Q6ZN55 896 aaPredicted RBP12.41□□□□□ -0.42
DDX55-206ENST00000539934 RTL4Q6ZR62 310 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 BMP8AQ7Z5Y6 402 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 DSG4Q86SJ6 1040 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 NLRP8Q86W28 1048 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 CDKL3Q8IVW4 592 aaPredicted RBP12.41□□□□□ -0.42
DDX55-206ENST00000539934 ZNF321PQ8N8H1 164 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 SNX31Q8N9S9 440 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 GLIS1Q8NBF1 620 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 KCTD6Q8NC69 237 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 ZBTB44Q8NCP5 570 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 POF1BQ8WVV4 589 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 FEM1CQ96JP0 617 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 B3GNT5Q9BYG0 378 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 TRIM39Q9HCM9 518 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 SCUBE2Q9NQ36 999 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 OLA1Q9NTK5 396 aaKnown RBP12.41□□□□□ -0.42
DDX55-206ENST00000539934 HCSTQ9UBK5 93 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 FBXL21Q9UKT6 434 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 ANKRD6Q9Y2G4 727 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 UGT2A1Q9Y4X1 527 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 KMT2EQ8IZD2 1858 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 A0A0G2JMP0 313 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 TRIM38O00635 465 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 PRPSAP2O60256 369 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 EIF1BO60739 113 aaKnown RBP12.41□□□□□ -0.42
DDX55-206ENST00000539934 CNOT4O95628 575 aaKnown RBP12.41□□□□□ -0.42
DDX55-206ENST00000539934 TRUB2O95900 331 aaKnown RBP12.41□□□□□ -0.42
DDX55-206ENST00000539934 POMCP01189 267 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 CLUP10909 449 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 KDELR1P24390 212 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 PDHA2P29803 388 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 EIF1P41567 113 aaKnown RBP12.41□□□□□ -0.42
DDX55-206ENST00000539934 GPR3P46089 330 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 MAPK12P53778 367 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 DYNLT1P63172 113 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 DPYSL2Q16555 572 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 DDR2Q16832 855 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 DGKKQ5KSL6 1271 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 SH3PXD2AQ5TCZ1 1133 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 TRNP1Q6NT89 227 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 FAM26EQ8N5C1 309 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 CLHC1Q8NHS4 586 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 ZNF845Q96IR2 970 aaPredicted RBP12.41□□□□□ -0.42
DDX55-206ENST00000539934 TRAF4Q9BUZ4 470 aaPredicted RBP12.41□□□□□ -0.42
DDX55-206ENST00000539934 INTS10Q9NVR2 710 aaKnown RBP12.41□□□□□ -0.42
DDX55-206ENST00000539934 TOR4AQ9NXH8 423 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 PKD2L2Q9NZM6 624 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 INPP5FQ9Y2H2 1132 aa12.41□□□□□ -0.42
DDX55-206ENST00000539934 TTC3P53804 2025 aa12.4□□□□□ -0.42
DDX55-206ENST00000539934 LOC730098B7Z3J9 87 aa12.4□□□□□ -0.42
DDX55-206ENST00000539934 MASP2O00187 686 aa12.4□□□□□ -0.42
DDX55-206ENST00000539934 MEN1O00255 615 aa12.4□□□□□ -0.42
DDX55-206ENST00000539934 LIASO43766 372 aa12.4□□□□□ -0.42
DDX55-206ENST00000539934 CHRM5P08912 532 aaPredicted RBP12.4□□□□□ -0.42
DDX55-206ENST00000539934 CLEC2LP0C7M8 214 aa12.4□□□□□ -0.42
DDX55-206ENST00000539934 RNF224P0DH78 156 aa12.4□□□□□ -0.42
DDX55-206ENST00000539934 ATF2P15336 505 aa12.4□□□□□ -0.42
DDX55-206ENST00000539934 PTPN1P18031 435 aaKnown RBP12.4□□□□□ -0.42
DDX55-206ENST00000539934 XPAP23025 273 aaPredicted RBP12.4□□□□□ -0.42
DDX55-206ENST00000539934 IGFBP6P24592 240 aaPredicted RBP12.4□□□□□ -0.42
DDX55-206ENST00000539934 EIF2S3P41091 472 aaKnown RBP12.4□□□□□ -0.42
DDX55-206ENST00000539934 ABATP80404 500 aa12.4□□□□□ -0.42
DDX55-206ENST00000539934 SCYL2Q6P3W7 929 aa12.4□□□□□ -0.42
DDX55-206ENST00000539934 PAPD4Q6PIY7 484 aaKnown RBP12.4□□□□□ -0.42
DDX55-206ENST00000539934 OGFOD3Q6PK18 319 aa12.4□□□□□ -0.42
DDX55-206ENST00000539934 PRSS42Q7Z5A4 293 aa12.4□□□□□ -0.42
DDX55-206ENST00000539934 IGFN1Q86VF2 1251 aa12.4□□□□□ -0.42
DDX55-206ENST00000539934 TMEM86AQ8N2M4 240 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms