RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 KIAA1841Q6NSI8 718 aa13.82□□□□□ -0.2
UBE3B-210ENST00000539599 KCTD8Q6ZWB6 473 aa13.82□□□□□ -0.2
UBE3B-210ENST00000539599 PTRH1Q86Y79 214 aaKnown RBP13.82□□□□□ -0.2
UBE3B-210ENST00000539599 SEPT8Q92599 483 aa13.82□□□□□ -0.2
UBE3B-210ENST00000539599 TTLL2Q9BWV7 592 aa13.82□□□□□ -0.2
UBE3B-210ENST00000539599 C1QTNF3Q9BXJ4 246 aa13.82□□□□□ -0.2
UBE3B-210ENST00000539599 NUSAP1Q9BXS6 441 aaKnown RBP13.82□□□□□ -0.2
UBE3B-210ENST00000539599 LRRC3Q9BY71 257 aa13.82□□□□□ -0.2
UBE3B-210ENST00000539599 IL26Q9NPH9 171 aa13.82□□□□□ -0.2
UBE3B-210ENST00000539599 RIC8BQ9NVN3 520 aa13.82□□□□□ -0.2
UBE3B-210ENST00000539599 SLC25A37Q9NYZ2 338 aa13.82□□□□□ -0.2
UBE3B-210ENST00000539599 DHRS7Q9Y394 339 aa13.82□□□□□ -0.2
UBE3B-210ENST00000539599 MYO7AQ13402 2215 aa13.82□□□□□ -0.2
UBE3B-210ENST00000539599 PQBP1O60828 265 aaKnown RBP13.82□□□□□ -0.2
UBE3B-210ENST00000539599 LRATO95237 230 aa13.82□□□□□ -0.2
UBE3B-210ENST00000539599 GPIP06744 558 aa13.82□□□□□ -0.2
UBE3B-210ENST00000539599 SELPP16109 830 aa13.82□□□□□ -0.2
UBE3B-210ENST00000539599 EEF1B2P24534 225 aaKnown RBP13.82□□□□□ -0.2
UBE3B-210ENST00000539599 CAPGP40121 348 aa13.82□□□□□ -0.2
UBE3B-210ENST00000539599 STK19P49842 368 aaPredicted RBP13.82□□□□□ -0.2
UBE3B-210ENST00000539599 TMED1Q13445 227 aa13.82□□□□□ -0.2
UBE3B-210ENST00000539599 BTG3Q14201 252 aaPredicted RBP13.82□□□□□ -0.2
UBE3B-210ENST00000539599 CPSF6Q16630 551 aaKnown RBP eCLIP13.82□□□□□ -0.2
UBE3B-210ENST00000539599 TMTC4Q5T4D3 741 aa13.82□□□□□ -0.2
UBE3B-210ENST00000539599 TXNDC11Q6PKC3 985 aa13.82□□□□□ -0.2
UBE3B-210ENST00000539599 MSRB3Q8IXL7 192 aa13.82□□□□□ -0.2
UBE3B-210ENST00000539599 LIX1Q8N485 282 aa13.82□□□□□ -0.2
UBE3B-210ENST00000539599 PIH1D2Q8WWB5 315 aa13.82□□□□□ -0.2
UBE3B-210ENST00000539599 ZNF583Q96ND8 569 aa13.82□□□□□ -0.2
UBE3B-210ENST00000539599 LATS2Q9NRM7 1088 aa13.82□□□□□ -0.2
UBE3B-210ENST00000539599 GALNT8Q9NY28 637 aa13.82□□□□□ -0.2
UBE3B-210ENST00000539599 TRPM5Q9NZQ8 1165 aa13.82□□□□□ -0.2
UBE3B-210ENST00000539599 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.82□□□□□ -0.2
UBE3B-210ENST00000539599 RIMKLBQ9ULI2 386 aa13.82□□□□□ -0.2
UBE3B-210ENST00000539599 A0A0J9YVX5 310 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 LOC730098B7Z3J9 87 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 AREL1O15033 823 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 AXIN1O15169 862 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 MAN1A2O60476 641 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 VPS4BO75351 444 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 SH3BGRLO75368 114 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 MTX2O75431 263 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 RPLP2P05387 115 aaKnown RBP13.81□□□□□ -0.2
UBE3B-210ENST00000539599 HNF1BP35680 557 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 PIGAP37287 484 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 PTGER3P43115 390 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 CTSOP43234 321 aaPredicted RBP13.81□□□□□ -0.2
UBE3B-210ENST00000539599 CHRNA6Q15825 494 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 IMPG1Q17R60 797 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 XKR5Q6UX68 686 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 TMEM150AQ86TG1 271 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 CLEC4FQ8N1N0 589 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 LRRC43Q8N309 656 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 ITFG1Q8TB96 612 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 SNRNP27Q8WVK2 155 aaKnown RBP13.81□□□□□ -0.2
UBE3B-210ENST00000539599 MYO19Q96H55 970 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 CLPBQ9H078 707 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 CXorf21Q9HAI6 301 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 ZNF334Q9HCZ1 680 aaPredicted RBP13.81□□□□□ -0.2
UBE3B-210ENST00000539599 HPS4Q9NQG7 708 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 WWOXQ9NZC7 414 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 INVSQ9Y283 1065 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 TDRKHQ9Y2W6 561 aaKnown RBP13.81□□□□□ -0.2
UBE3B-210ENST00000539599 ARIH1Q9Y4X5 557 aaPredicted RBP13.81□□□□□ -0.2
UBE3B-210ENST00000539599 ST14Q9Y5Y6 855 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 ESR1P03372 595 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 ENO2P09104 434 aaPredicted RBP13.81□□□□□ -0.2
UBE3B-210ENST00000539599 EFNA1P20827 205 aaPredicted RBP13.81□□□□□ -0.2
UBE3B-210ENST00000539599 MTHFRP42898 656 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 KPNA1P52294 538 aaPredicted RBP13.81□□□□□ -0.2
UBE3B-210ENST00000539599 CYP4F8P98187 520 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 CACNG1Q06432 222 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 CDH18Q13634 790 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 ARHGEF7Q14155 803 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 SF1Q15637 639 aaKnown RBP13.81□□□□□ -0.2
UBE3B-210ENST00000539599 ZXDCQ2QGD7 858 aaPredicted RBP13.81□□□□□ -0.2
UBE3B-210ENST00000539599 TMEM259Q4ZIN3 620 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 LHX8Q68G74 356 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 BORAQ6PGQ7 559 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 ADAMTS19Q8TE59 1207 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 KLF16Q9BXK1 252 aaPredicted RBP13.81□□□□□ -0.2
UBE3B-210ENST00000539599 ZIM2Q9NZV7 527 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 LIMD1Q9UGP4 676 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 CD84Q9UIB8 345 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 VPS4AQ9UN37 437 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 CCL27Q9Y4X3 112 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 ANGPTL3Q9Y5C1 460 aa13.81□□□□□ -0.2
UBE3B-210ENST00000539599 A0A087WXM4 84 aa13.8□□□□□ -0.2
UBE3B-210ENST00000539599 FZD6O60353 706 aa13.8□□□□□ -0.2
UBE3B-210ENST00000539599 BMP10O95393 424 aa13.8□□□□□ -0.2
UBE3B-210ENST00000539599 BPIP17213 487 aa13.8□□□□□ -0.2
UBE3B-210ENST00000539599 EEFSECP57772 596 aaKnown RBP13.8□□□□□ -0.2
UBE3B-210ENST00000539599 PHC1P78364 1004 aa13.8□□□□□ -0.2
UBE3B-210ENST00000539599 FOXM1Q08050 763 aa13.8□□□□□ -0.2
UBE3B-210ENST00000539599 AARS2Q5JTZ9 985 aaKnown RBP13.8□□□□□ -0.2
UBE3B-210ENST00000539599 GCNT7Q6ZNI0 430 aa13.8□□□□□ -0.2
UBE3B-210ENST00000539599 TMEM179BQ7Z7N9 219 aa13.8□□□□□ -0.2
UBE3B-210ENST00000539599 NPAS4Q8IUM7 802 aa13.8□□□□□ -0.2
UBE3B-210ENST00000539599 RIMKLAQ8IXN7 391 aa13.8□□□□□ -0.2
UBE3B-210ENST00000539599 HM13Q8TCT9 377 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms