RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 HOXB6P17509 224 aaKnown RBP9.51□□□□□ -0.89
CDH13-204ENST00000539548 MSH3P20585 1137 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 PCMT1P22061 227 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 AKT1P31749 480 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 MC4RP32245 332 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 RYKP34925 604 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 PIGAP37287 484 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 OPRL1P41146 370 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 IST1P53990 364 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 GTF2H2Q13888 395 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 CTF1Q16619 201 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 AAK1Q2M2I8 961 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 ZC3H12BQ5HYM0 836 aaKnown RBP9.51□□□□□ -0.89
CDH13-204ENST00000539548 GTF2H2CQ6P1K8 395 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 FRA10AC1Q70Z53 315 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 GOLGA7Q7Z5G4 137 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 RBM23Q86U06 439 aaKnown RBP9.51□□□□□ -0.89
CDH13-204ENST00000539548 ADHFE1Q8IWW8 467 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 CARNMT1Q8N4J0 409 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 DNAJC5GQ8N7S2 189 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 DCBLD1Q8N8Z6 715 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 KLHDC9Q8NEP7 349 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 OR4F6Q8NGB9 312 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 FBXO30Q8TB52 745 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 FBLIM1Q8WUP2 373 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 SLC13A3Q8WWT9 602 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 FBXO32Q969P5 355 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 VMP1Q96GC9 406 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 NODALQ96S42 347 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 ZBTB18Q99592 522 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 SH3GL1Q99961 368 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 ZBED2Q9BTP6 218 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 THUMPD3Q9BV44 507 aaKnown RBP9.51□□□□□ -0.89
CDH13-204ENST00000539548 MROQ9BYG7 248 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 RETREG1Q9H6L5 497 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 MAGIXQ9H6Y5 334 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 TLR8Q9NR97 1041 aaKnown RBP9.51□□□□□ -0.89
CDH13-204ENST00000539548 WDR37Q9Y2I8 494 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 POLR3HQ9Y535 204 aaPredicted RBP9.51□□□□□ -0.89
CDH13-204ENST00000539548 PCDHB5Q9Y5E4 795 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 PCDHGB1Q9Y5G3 927 aa9.51□□□□□ -0.89
CDH13-204ENST00000539548 A0A0D9SEW6 157 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 ELOVL7A1L3X0 281 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 ZNF99A8MXY4 864 aaPredicted RBP9.5□□□□□ -0.89
CDH13-204ENST00000539548 CXCR6O00574 342 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 NDUFS2O75306 463 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 OTCP00480 354 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 ESR1P03372 595 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 CCDC159P0C7I6 412 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 SLC2A4P14672 509 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 IL1RNP18510 177 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 CR2P20023 1033 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 PTGER3P43115 390 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 RGRP47804 291 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 CLCN7P51798 805 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 TRIM32Q13049 653 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 ABRAXAS2Q15018 415 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 OXA1LQ15070 435 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 TRIM16LQ309B1 348 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 RUNDC3AQ59EK9 446 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 ZNF691Q5VV52 312 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 LGI2Q8N0V4 545 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 TMCO5AQ8N6Q1 288 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 PIK3C3Q8NEB9 887 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 OR10A6Q8NH74 314 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 POP5Q969H6 163 aaKnown RBP9.5□□□□□ -0.89
CDH13-204ENST00000539548 ZNF566Q969W8 418 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 RHBDF1Q96CC6 855 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 CINPQ9BW66 212 aaPredicted RBP9.5□□□□□ -0.89
CDH13-204ENST00000539548 HMG20AQ9NP66 347 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 LTB4R2Q9NPC1 389 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 AKIP1Q9NQ31 210 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 GIN1Q9NXP7 522 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 UBA2Q9UBT2 640 aaPredicted RBP9.5□□□□□ -0.89
CDH13-204ENST00000539548 CPA4Q9UI42 421 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 FKBPLQ9UIM3 349 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 C3orf18Q9UK00 162 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 EIF3LQ9Y262 564 aaKnown RBP9.5□□□□□ -0.89
CDH13-204ENST00000539548 DHRS7Q9Y394 339 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 ACTL7AQ9Y615 435 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 CPQQ9Y646 472 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 PCNTO95613 3336 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 E5RI56 91 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 SLC1A7O00341 560 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 KDELR3O43731 214 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 ADAM23O75077 832 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 DUSP11O75319 330 aaKnown RBP9.5□□□□□ -0.89
CDH13-204ENST00000539548 PRKD3O94806 890 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 INMTO95050 263 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 IGHA2P01877 340 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 RETP07949 1114 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 AGXTP21549 392 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 IDUAP35475 653 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 DCTP40126 519 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 ARL1P40616 181 aaPredicted RBP9.5□□□□□ -0.89
CDH13-204ENST00000539548 KPNA1P52294 538 aaPredicted RBP9.5□□□□□ -0.89
CDH13-204ENST00000539548 GP2P55259 537 aaKnown RBP9.5□□□□□ -0.89
CDH13-204ENST00000539548 PLIN5Q00G26 463 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 PIGFQ07326 219 aa9.5□□□□□ -0.89
CDH13-204ENST00000539548 TRAF3Q13114 568 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms