RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 CCDC68Q9H2F9 335 aa16.91■□□□□ 0.3
CLN6-202ENST00000538696 IL21RQ9HBE5 538 aa16.91■□□□□ 0.3
CLN6-202ENST00000538696 GPAMQ9HCL2 828 aa16.91■□□□□ 0.3
CLN6-202ENST00000538696 PARD6AQ9NPB6 346 aa16.91■□□□□ 0.3
CLN6-202ENST00000538696 SLC23A2Q9UGH3 650 aa16.91■□□□□ 0.3
CLN6-202ENST00000538696 GPR34Q9UPC5 381 aa16.91■□□□□ 0.3
CLN6-202ENST00000538696 RUVBL2Q9Y230 463 aaKnown RBP16.91■□□□□ 0.3
CLN6-202ENST00000538696 ARHGEF17Q96PE2 2063 aaPredicted RBP16.9■□□□□ 0.3
CLN6-202ENST00000538696 VPS13AQ96RL7 3174 aa16.9■□□□□ 0.3
CLN6-202ENST00000538696 QSOX1O00391 747 aa16.9■□□□□ 0.3
CLN6-202ENST00000538696 KLHL2O95198 593 aa16.9■□□□□ 0.3
CLN6-202ENST00000538696 BPGMP07738 259 aa16.9■□□□□ 0.3
CLN6-202ENST00000538696 CELA2BP08218 269 aaPredicted RBP16.9■□□□□ 0.3
CLN6-202ENST00000538696 SYPP08247 313 aa16.9■□□□□ 0.3
CLN6-202ENST00000538696 VIMP08670 466 aaKnown RBP16.9■□□□□ 0.3
CLN6-202ENST00000538696 OR56A5P0C7T3 313 aa16.9■□□□□ 0.3
CLN6-202ENST00000538696 ITGB6P18564 788 aa16.9■□□□□ 0.3
CLN6-202ENST00000538696 GLRBP48167 497 aa16.9■□□□□ 0.3
CLN6-202ENST00000538696 RXRGP48443 463 aa16.9■□□□□ 0.3
CLN6-202ENST00000538696 BLKP51451 505 aa16.9■□□□□ 0.3
CLN6-202ENST00000538696 CSHL1Q14406 222 aa16.9■□□□□ 0.3
CLN6-202ENST00000538696 SF3A2Q15428 464 aaKnown RBP16.9■□□□□ 0.3
CLN6-202ENST00000538696 TCEA2Q15560 299 aa16.9■□□□□ 0.3
CLN6-202ENST00000538696 PTRHD1Q6GMV3 140 aaKnown RBP16.9■□□□□ 0.3
CLN6-202ENST00000538696 LRRC8EQ6NSJ5 796 aa16.9■□□□□ 0.3
CLN6-202ENST00000538696 IL27RAQ6UWB1 636 aa16.9■□□□□ 0.3
CLN6-202ENST00000538696 XKR5Q6UX68 686 aa16.9■□□□□ 0.3
CLN6-202ENST00000538696 RGS9BPQ6ZS82 235 aa16.9■□□□□ 0.3
CLN6-202ENST00000538696 CHST15Q7LFX5 561 aaPredicted RBP16.9■□□□□ 0.3
CLN6-202ENST00000538696 TBC1D1Q86TI0 1168 aaPredicted RBP16.9■□□□□ 0.3
CLN6-202ENST00000538696 CCL4L1Q8NHW4 92 aa16.9■□□□□ 0.3
CLN6-202ENST00000538696 LRRC8CQ8TDW0 803 aa16.9■□□□□ 0.3
CLN6-202ENST00000538696 ANKRD49Q8WVL7 239 aa16.9■□□□□ 0.3
CLN6-202ENST00000538696 ZNF75CPQ92670 426 aaPredicted RBP16.9■□□□□ 0.3
CLN6-202ENST00000538696 SCYL1Q96KG9 808 aa16.9■□□□□ 0.3
CLN6-202ENST00000538696 LINC00615Q96LM1 132 aaPredicted RBP16.9■□□□□ 0.3
CLN6-202ENST00000538696 TIMM29Q9BSF4 260 aa16.9■□□□□ 0.3
CLN6-202ENST00000538696 TMEM168Q9H0V1 697 aa16.9■□□□□ 0.3
CLN6-202ENST00000538696 GAREM1Q9H706 876 aa16.9■□□□□ 0.3
CLN6-202ENST00000538696 GALPQ9UBC7 116 aa16.9■□□□□ 0.3
CLN6-202ENST00000538696 ST14Q9Y5Y6 855 aa16.9■□□□□ 0.3
CLN6-202ENST00000538696 CABIN1Q9Y6J0 2220 aa16.89■□□□□ 0.29
CLN6-202ENST00000538696 A0A1B0GTQ1 180 aa16.89■□□□□ 0.29
CLN6-202ENST00000538696 LNP1A1A4G5 178 aa16.89■□□□□ 0.29
CLN6-202ENST00000538696 H3BM21 787 aa16.89■□□□□ 0.29
CLN6-202ENST00000538696 SDC3O75056 442 aa16.89■□□□□ 0.29
CLN6-202ENST00000538696 LRP3O75074 770 aa16.89■□□□□ 0.29
CLN6-202ENST00000538696 POP7O75817 140 aaKnown RBP16.89■□□□□ 0.29
CLN6-202ENST00000538696 PIAS2O75928 621 aa16.89■□□□□ 0.29
CLN6-202ENST00000538696 CER1O95813 267 aa16.89■□□□□ 0.29
CLN6-202ENST00000538696 FTH1P02794 183 aa16.89■□□□□ 0.29
CLN6-202ENST00000538696 CTBSQ01459 385 aa16.89■□□□□ 0.29
CLN6-202ENST00000538696 C1orf61Q13536 156 aa16.89■□□□□ 0.29
CLN6-202ENST00000538696 PCLAFQ15004 111 aa16.89■□□□□ 0.29
CLN6-202ENST00000538696 TSNAXIP1Q2TAA8 658 aa16.89■□□□□ 0.29
CLN6-202ENST00000538696 CCDC153Q494R4 210 aa16.89■□□□□ 0.29
CLN6-202ENST00000538696 ZNF658BQ4V348 819 aaPredicted RBP16.89■□□□□ 0.29
CLN6-202ENST00000538696 LCA5Q86VQ0 697 aa16.89■□□□□ 0.29
CLN6-202ENST00000538696 ZNF548Q8NEK5 533 aaPredicted RBP16.89■□□□□ 0.29
CLN6-202ENST00000538696 CCT8L2Q96SF2 557 aa16.89■□□□□ 0.29
CLN6-202ENST00000538696 GPR21Q99679 349 aa16.89■□□□□ 0.29
CLN6-202ENST00000538696 CCM2Q9BSQ5 444 aa16.89■□□□□ 0.29
CLN6-202ENST00000538696 GTPBP2Q9BX10 602 aaKnown RBP16.89■□□□□ 0.29
CLN6-202ENST00000538696 NMRAL1Q9HBL8 299 aa16.89■□□□□ 0.29
CLN6-202ENST00000538696 POPDC3Q9HBV1 291 aa16.89■□□□□ 0.29
CLN6-202ENST00000538696 SEMA4GQ9NTN9 838 aa16.89■□□□□ 0.29
CLN6-202ENST00000538696 TRNAU1APQ9NX07 287 aaKnown RBP16.89■□□□□ 0.29
CLN6-202ENST00000538696 SIRPGQ9P1W8 387 aa16.89■□□□□ 0.29
CLN6-202ENST00000538696 GULP1Q9UBP9 304 aa16.89■□□□□ 0.29
CLN6-202ENST00000538696 KCNK6Q9Y257 313 aa16.89■□□□□ 0.29
CLN6-202ENST00000538696 COMMD10Q9Y6G5 202 aa16.89■□□□□ 0.29
CLN6-202ENST00000538696 DNMT3AQ9Y6K1 912 aaPredicted RBP16.89■□□□□ 0.29
CLN6-202ENST00000538696 DMDP11532 3685 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 MYO15AQ9UKN7 3530 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 PRR19A6NJB7 356 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 H3BMM5 538 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 TK2O00142 265 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 BIRC5O15392 142 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 VPS26AO75436 327 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 TRIM16O95361 564 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 LTA4HP09960 611 aaKnown RBP16.88■□□□□ 0.29
CLN6-202ENST00000538696 SBK3P0C264 359 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 CCDC166P0CW27 439 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 TGM1P22735 817 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 AK4P27144 223 aaPredicted RBP16.88■□□□□ 0.29
CLN6-202ENST00000538696 EPHA8P29322 1005 aaPredicted RBP16.88■□□□□ 0.29
CLN6-202ENST00000538696 ALDH3A1P30838 453 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 ARRB1P49407 418 aaPredicted RBP16.88■□□□□ 0.29
CLN6-202ENST00000538696 HNRNPKP61978 463 aaKnown RBP eCLIP16.88■□□□□ 0.29
CLN6-202ENST00000538696 ARHGAP8P85298 464 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 PDAP1Q13442 181 aaKnown RBP16.88■□□□□ 0.29
CLN6-202ENST00000538696 LRP8Q14114 963 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 CSRP2Q16527 193 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 PRRT3Q5FWE3 981 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 FAM83HQ6ZRV2 1179 aaPredicted RBP16.88■□□□□ 0.29
CLN6-202ENST00000538696 FAM47EQ6ZV65 393 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 ASCL5Q7RTU5 278 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 CCDC91Q7Z6B0 441 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 NRROSQ86YC3 692 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 NUDCD3Q8IVD9 361 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms