RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 HCN1O60741 890 aa11.05□□□□□ -0.64
LINC00346-201ENST00000538077 MMP20O60882 483 aa11.05□□□□□ -0.64
LINC00346-201ENST00000538077 MMP8P22894 467 aa11.05□□□□□ -0.64
LINC00346-201ENST00000538077 KIR3DL1P43629 444 aa11.05□□□□□ -0.64
LINC00346-201ENST00000538077 BTN3A2P78410 334 aa11.05□□□□□ -0.64
LINC00346-201ENST00000538077 TLR1Q15399 786 aa11.05□□□□□ -0.64
LINC00346-201ENST00000538077 LDLRAP1Q5SW96 308 aa11.05□□□□□ -0.64
LINC00346-201ENST00000538077 TSTD2Q5T7W7 516 aa11.05□□□□□ -0.64
LINC00346-201ENST00000538077 GDPD4Q6W3E5 623 aa11.05□□□□□ -0.64
LINC00346-201ENST00000538077 TMC8Q8IU68 726 aa11.05□□□□□ -0.64
LINC00346-201ENST00000538077 SLC22A15Q8IZD6 547 aa11.05□□□□□ -0.64
LINC00346-201ENST00000538077 MSL3Q8N5Y2 521 aaKnown RBP11.05□□□□□ -0.64
LINC00346-201ENST00000538077 CAPSLQ8WWF8 208 aa11.05□□□□□ -0.64
LINC00346-201ENST00000538077 C1GALT1C1Q96EU7 318 aa11.05□□□□□ -0.64
LINC00346-201ENST00000538077 RNF39Q9H2S5 420 aa11.05□□□□□ -0.64
LINC00346-201ENST00000538077 PCDHGA3Q9Y5H0 932 aa11.05□□□□□ -0.64
LINC00346-201ENST00000538077 RNF225M0QZC1 329 aaPredicted RBP11.04□□□□□ -0.64
LINC00346-201ENST00000538077 PPEF2O14830 753 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 CRHR1P34998 444 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 STAT5AP42229 794 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 CBFBQ13951 182 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 PITRM1Q5JRX3 1037 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 SPDYCQ5MJ68 293 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 MLIPQ5VWP3 458 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 MBLAC2Q68D91 279 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 SULT1C3Q6IMI6 304 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 OR5AK3PQ8NH89 298 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 FAR1Q8WVX9 515 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 CPT1BQ92523 772 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 MAGEH1Q9H213 219 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 TLR9Q9NR96 1032 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 SAMD4AQ9UPU9 718 aaKnown RBP11.04□□□□□ -0.64
LINC00346-201ENST00000538077 BTN3A3O00478 584 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 PDX1P52945 283 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 DRG2P55039 364 aaKnown RBP11.04□□□□□ -0.64
LINC00346-201ENST00000538077 TAB1Q15750 504 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 SYPL2Q5VXT5 272 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 SUN3Q8TAQ9 357 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 AGAP11Q8TF27 550 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 PYCR2Q96C36 320 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 BCAS3Q9H6U6 928 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 LDAHQ9H6V9 325 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 HEBP2Q9Y5Z4 205 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 IRS2Q9Y4H2 1338 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 TOPAZ1Q8N9V7 1692 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 SNX3O60493 162 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 SLC1A2P43004 574 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 CLCN7P51798 805 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 QPCTQ16769 361 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 TNFAIP8L2Q6P589 184 aaPredicted RBP11.04□□□□□ -0.64
LINC00346-201ENST00000538077 Q6ZVU0 165 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 IQCHQ86VS3 1027 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 AMZ2Q86W34 360 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 PEX5LQ8IYB4 626 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 POC5Q8NA72 575 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 TMEM145Q8NBT3 493 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 TCF12Q99081 682 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 MARK1Q9P0L2 795 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 MTRRQ9UBK8 725 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 DMTF1Q9Y222 760 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 YIPF1Q9Y548 306 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 ATRNL1Q5VV63 1379 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 ALOX15BO15296 676 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 ZNF208O43345 1280 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 VNN1O95497 513 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 TGFB1P01137 390 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 CHRM5P08912 532 aaPredicted RBP11.04□□□□□ -0.64
LINC00346-201ENST00000538077 CDH12P55289 794 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 C6orf52Q5T4I8 152 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 NAIF1Q69YI7 327 aaPredicted RBP11.04□□□□□ -0.64
LINC00346-201ENST00000538077 FAM46DQ8NEK8 389 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 OR5T3Q8NGG3 340 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 OR2AJ1Q8NGZ0 328 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 SLC25A51Q9H1U9 297 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 TPK1Q9H3S4 243 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 NKIRAS2Q9NYR9 191 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 PCDHB11Q9Y5F2 797 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 CICQ96RK0 1608 aaPredicted RBP11.04□□□□□ -0.64
LINC00346-201ENST00000538077 ROBO3Q96MS0 1386 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 PCDHGA12O60330 932 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 TPSB2P20231 275 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 TNFRSF8P28908 595 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 TPSAB1Q15661 275 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 SOWAHAQ2M3V2 549 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 TIMM50Q3ZCQ8 353 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 TCEAL6Q6IPX3 200 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 MPP5Q8N3R9 675 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 HCAR2Q8TDS4 363 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 CDH7Q9ULB5 785 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 C15orf41Q9Y2V0 281 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 PLLPQ9Y342 182 aa11.04□□□□□ -0.64
LINC00346-201ENST00000538077 RIIAD1A6NNX1 92 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 IGFBP5P24593 272 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 GALK1P51570 392 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 NAA20P61599 178 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 CHAF1BQ13112 559 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 QPRTQ15274 297 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 DCST1Q5T197 706 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 LIN54Q6MZP7 749 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 RBM44Q6ZP01 1051 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms