RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 NXPH1P58417 271 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 CTBSQ01459 385 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 BNC1Q01954 994 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 SIM2Q14190 667 aaPredicted RBP15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 PTK2BQ14289 1009 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 TSNAXIP1Q2TAA8 658 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 PARGQ86W56 976 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 SLC22A15Q8IZD6 547 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 CNPY4Q8N129 248 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 MYO1HQ8N1T3 1032 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 CFAP61Q8NHU2 1237 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 PIGKQ92643 395 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 GLMNQ92990 594 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 PDLIM5Q96HC4 596 aaKnown RBP15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 ZC3H10Q96K80 434 aaKnown RBP15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 TSNARE1Q96NA8 513 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 TIMM29Q9BSF4 260 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 ACSS2Q9NR19 701 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 DNAJC28Q9NX36 388 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 CIDEBQ9UHD4 219 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 PILRBQ9UKJ0 227 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 WDR37Q9Y2I8 494 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 DNAH14Q0VDD8 3507 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 G3V2L1 256 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 H3BM21 787 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 LIN7AO14910 233 aaPredicted RBP15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 KPNA5O15131 536 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 VILLO15195 856 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 TM9SF1O15321 606 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 SNX2O60749 519 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 CBSLP0DN79 551 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 CBSP35520 551 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 AFF3P51826 1226 aaKnown RBP15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 ATP6V0D1P61421 351 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 C1orf61Q13536 156 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 ACAP2Q15057 778 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 PHKG1Q16816 387 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 METRNLQ641Q3 311 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 SBSNQ6UWP8 590 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 CCDC91Q7Z6B0 441 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 C11orf74Q86VG3 221 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 IQCHQ86VS3 1027 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 NRROSQ86YC3 692 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 PHACTR4Q8IZ21 702 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 CCDC63Q8NA47 563 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 KIAA1191Q96A73 305 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 MOCOSQ96EN8 888 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 ATOH8Q96SQ7 321 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 WWP1Q9H0M0 922 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 OR52A5Q9H2C5 316 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 UTP6Q9NYH9 597 aaKnown RBP15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 NKIRAS1Q9NYS0 192 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 CFAP20Q9Y6A4 193 aaKnown RBP15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 DNMT3AQ9Y6K1 912 aaPredicted RBP15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 DGKBQ9Y6T7 804 aa15.32■□□□□ 0.04
SFSWAP-206ENST00000537582 UBXN8O00124 270 aa15.31■□□□□ 0.04
SFSWAP-206ENST00000537582 TNFP01375 233 aa15.31■□□□□ 0.04
SFSWAP-206ENST00000537582 DHRS4L1P0CG22 281 aa15.31■□□□□ 0.04
SFSWAP-206ENST00000537582 ENO3P13929 434 aaPredicted RBP15.31■□□□□ 0.04
SFSWAP-206ENST00000537582 KCNA4P22459 653 aa15.31■□□□□ 0.04
SFSWAP-206ENST00000537582 CLCNKAP51800 687 aa15.31■□□□□ 0.04
SFSWAP-206ENST00000537582 SLC18A1P54219 525 aa15.31■□□□□ 0.04
SFSWAP-206ENST00000537582 GUCY1A3Q02108 690 aa15.31■□□□□ 0.04
SFSWAP-206ENST00000537582 DMPKQ09013 629 aa15.31■□□□□ 0.04
SFSWAP-206ENST00000537582 PCLAFQ15004 111 aa15.31■□□□□ 0.04
SFSWAP-206ENST00000537582 CCSMST1Q4G0I0 132 aa15.31■□□□□ 0.04
SFSWAP-206ENST00000537582 FBXO48Q5FWF7 155 aa15.31■□□□□ 0.04
SFSWAP-206ENST00000537582 DUS1LQ6P1R4 473 aaKnown RBP15.31■□□□□ 0.04
SFSWAP-206ENST00000537582 KLC3Q6P597 504 aa15.31■□□□□ 0.04
SFSWAP-206ENST00000537582 SLC30A9Q6PML9 568 aa15.31■□□□□ 0.04
SFSWAP-206ENST00000537582 MBOAT1Q6ZNC8 495 aa15.31■□□□□ 0.04
SFSWAP-206ENST00000537582 SFTPA2Q8IWL1 248 aa15.31■□□□□ 0.04
SFSWAP-206ENST00000537582 RMDN2Q96LZ7 410 aa15.31■□□□□ 0.04
SFSWAP-206ENST00000537582 MRPL46Q9H2W6 279 aaKnown RBP15.31■□□□□ 0.04
SFSWAP-206ENST00000537582 TFB2MQ9H5Q4 396 aaKnown RBP15.31■□□□□ 0.04
SFSWAP-206ENST00000537582 PRDM8Q9NQV8 689 aa15.31■□□□□ 0.04
SFSWAP-206ENST00000537582 TBC1D29Q9UFV1 150 aa15.31■□□□□ 0.04
SFSWAP-206ENST00000537582 PCDHGA2Q9Y5H1 932 aa15.31■□□□□ 0.04
SFSWAP-206ENST00000537582 SNX11Q9Y5W9 270 aa15.31■□□□□ 0.04
SFSWAP-206ENST00000537582 DMDP11532 3685 aa15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 SPAG17Q6Q759 2223 aa15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 LAMA1P25391 3075 aa15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 NCF1BA6NI72 391 aaPredicted RBP15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 NCF1CA8MVU1 366 aaPredicted RBP15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 PATE3B3GLJ2 98 aa15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 MPC1LP0DKB6 136 aa15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 MTHFD2P13995 350 aa15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 NCF1P14598 390 aaPredicted RBP15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 JUNDP17535 347 aa15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 ACADLP28330 430 aa15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 CNR2P34972 360 aa15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 BDKRB1P46663 353 aa15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 SERPINB4P48594 390 aa15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 OVGP1Q12889 678 aa15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 PPP1R3AQ16821 1122 aa15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 KIF19Q2TAC6 998 aa15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 HHATQ5VTY9 493 aa15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 CES4AQ5XG92 561 aa15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 LCA5Q86VQ0 697 aa15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 RASGRP3Q8IV61 690 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms