RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	SATL1	Q86VE3	508 aa		5.18	□□□□□ -1.58
PRKDC-208	ENST00000536710	KMT5C	Q86Y97	462 aa		5.18	□□□□□ -1.58
PRKDC-208	ENST00000536710	RDM1	Q8NG50	284 aa		5.18	□□□□□ -1.58
PRKDC-208	ENST00000536710	OR5M8	Q8NGP6	311 aa		5.18	□□□□□ -1.58
PRKDC-208	ENST00000536710	B4GALNT2	Q8NHY0	566 aa		5.18	□□□□□ -1.58
PRKDC-208	ENST00000536710	ATL1	Q8WXF7	558 aa		5.18	□□□□□ -1.58
PRKDC-208	ENST00000536710	ROBO4	Q8WZ75	1007 aa		5.18	□□□□□ -1.58
PRKDC-208	ENST00000536710	RTP4	Q96DX8	246 aa		5.18	□□□□□ -1.58
PRKDC-208	ENST00000536710	STAMBPL1	Q96FJ0	436 aa		5.18	□□□□□ -1.58
PRKDC-208	ENST00000536710	VMP1	Q96GC9	406 aa		5.18	□□□□□ -1.58
PRKDC-208	ENST00000536710	TTC14	Q96N46	770 aa		5.18	□□□□□ -1.58
PRKDC-208	ENST00000536710	TMEM204	Q9BSN7	226 aa		5.18	□□□□□ -1.58
PRKDC-208	ENST00000536710	RAB6C	Q9H0N0	254 aa		5.18	□□□□□ -1.58
PRKDC-208	ENST00000536710	IL25	Q9H293	177 aa		5.18	□□□□□ -1.58
PRKDC-208	ENST00000536710	POU2F3	Q9UKI9	436 aa		5.18	□□□□□ -1.58
PRKDC-208	ENST00000536710	PADI2	Q9Y2J8	665 aa		5.18	□□□□□ -1.58
PRKDC-208	ENST00000536710	SPIN1	Q9Y657	262 aa	Predicted RBP	5.18	□□□□□ -1.58
PRKDC-208	ENST00000536710	FLT1	P17948	1338 aa		5.18	□□□□□ -1.58
PRKDC-208	ENST00000536710	ZCWPW2	A0A1B0GU75	182 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	SRRM3	A6NNA2	597 aa	Predicted RBP	5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	ZNF587B	E7ETH6	402 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	PSMA7	O14818	248 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	LDB3	O75112	727 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	WISP2	O76076	250 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	GCNT3	O95395	438 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	LDLR	P01130	860 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	LIPF	P07098	398 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	PDGFRA	P16234	1089 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	MUT	P22033	750 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	BMX	P51813	675 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	MLLT10	P55197	1068 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	LINC00205	P59089	165 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	SEC61A1	P61619	476 aa	Known RBP	5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	RUNX1T1	Q06455	604 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	LTB	Q06643	244 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	SNTA1	Q13424	505 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	PPIG	Q13427	754 aa	Known RBP eCLIP	5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	ZNF273	Q14593	569 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	ASIC2	Q16515	512 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	NDUFAF5	Q5TEU4	345 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	FAM109B	Q6ICB4	259 aa	Predicted RBP	5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	FAM171B	Q6P995	826 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	PTOV1	Q86YD1	416 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	RBMXL3	Q8N7X1	1067 aa	Known RBP	5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	LILRB1	Q8NHL6	650 aa	Predicted RBP	5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	MOSPD2	Q8NHP6	518 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	SPSB1	Q96BD6	273 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	LINGO1	Q96FE5	620 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	LMF2	Q9BU23	707 aa	Known RBP	5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	TM6SF1	Q9BZW5	370 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	LRRC4	Q9HBW1	653 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	CHCHD3	Q9NX63	227 aa	Known RBP	5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	RALY	Q9UKM9	306 aa	Known RBP	5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	RNF150	Q9ULK6	438 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	PCDHAC2	Q9Y5I4	1007 aa		5.17	□□□□□ -1.58
PRKDC-208	ENST00000536710	MED19	A0JLT2	244 aa	Predicted RBP	5.16	□□□□□ -1.58
PRKDC-208	ENST00000536710	HYKK	A2RU49	373 aa		5.16	□□□□□ -1.58
PRKDC-208	ENST00000536710	TGDS	O95455	350 aa		5.16	□□□□□ -1.58
PRKDC-208	ENST00000536710	ALPL	P05186	524 aa		5.16	□□□□□ -1.58
PRKDC-208	ENST00000536710	H1F0	P07305	194 aa	Known RBP	5.16	□□□□□ -1.58
PRKDC-208	ENST00000536710	NGFR	P08138	427 aa		5.16	□□□□□ -1.58
PRKDC-208	ENST00000536710	RAB40AL	P0C0E4	278 aa		5.16	□□□□□ -1.58
PRKDC-208	ENST00000536710	DANCR	P0C864	163 aa		5.16	□□□□□ -1.58
PRKDC-208	ENST00000536710	CDH1	P12830	882 aa		5.16	□□□□□ -1.58
PRKDC-208	ENST00000536710	HLA-DOB	P13765	273 aa		5.16	□□□□□ -1.58
PRKDC-208	ENST00000536710	DAO	P14920	347 aa		5.16	□□□□□ -1.58
PRKDC-208	ENST00000536710	HTR6	P50406	440 aa		5.16	□□□□□ -1.58
PRKDC-208	ENST00000536710	ASPRV1	Q53RT3	343 aa		5.16	□□□□□ -1.58
PRKDC-208	ENST00000536710	FAM198B	Q6UWH4	519 aa		5.16	□□□□□ -1.58
PRKDC-208	ENST00000536710	SPATA21	Q7Z572	469 aa		5.16	□□□□□ -1.58
PRKDC-208	ENST00000536710	ZNF441	Q8N8Z8	693 aa		5.16	□□□□□ -1.58
PRKDC-208	ENST00000536710	SYN2	Q92777	582 aa	Predicted RBP	5.16	□□□□□ -1.58
PRKDC-208	ENST00000536710	FAM162A	Q96A26	154 aa		5.16	□□□□□ -1.58
PRKDC-208	ENST00000536710	BICD1	Q96G01	975 aa		5.16	□□□□□ -1.58
PRKDC-208	ENST00000536710	ZNF479	Q96JC4	524 aa		5.16	□□□□□ -1.58
PRKDC-208	ENST00000536710	FNBP1	Q96RU3	617 aa		5.16	□□□□□ -1.58
PRKDC-208	ENST00000536710	ZPBP	Q9BS86	351 aa		5.16	□□□□□ -1.58
PRKDC-208	ENST00000536710	SAA2-SAA4	A0A096LPE2	208 aa		5.15	□□□□□ -1.59
PRKDC-208	ENST00000536710	FEZF1	A0PJY2	475 aa		5.15	□□□□□ -1.59
PRKDC-208	ENST00000536710	ANXA2P2	A6NMY6	339 aa		5.15	□□□□□ -1.59
PRKDC-208	ENST00000536710	LACTBL1	A8MY62	500 aa		5.15	□□□□□ -1.59
PRKDC-208	ENST00000536710	PROB1	E7EW31	1015 aa		5.15	□□□□□ -1.59
PRKDC-208	ENST00000536710		H0Y626	953 aa		5.15	□□□□□ -1.59
PRKDC-208	ENST00000536710	CLDN4	O14493	209 aa		5.15	□□□□□ -1.59
PRKDC-208	ENST00000536710	DVL1	O14640	695 aa		5.15	□□□□□ -1.59
PRKDC-208	ENST00000536710	PAPSS2	O95340	614 aa	Predicted RBP	5.15	□□□□□ -1.59
PRKDC-208	ENST00000536710	ZBTB11	O95625	1053 aa	Predicted RBP	5.15	□□□□□ -1.59
PRKDC-208	ENST00000536710	TFAP2A	P05549	437 aa		5.15	□□□□□ -1.59
PRKDC-208	ENST00000536710	CKMT2	P17540	419 aa		5.15	□□□□□ -1.59
PRKDC-208	ENST00000536710	GM2A	P17900	193 aa		5.15	□□□□□ -1.59
PRKDC-208	ENST00000536710	CYP11B2	P19099	503 aa		5.15	□□□□□ -1.59
PRKDC-208	ENST00000536710	TCEA1	P23193	301 aa	Known RBP	5.15	□□□□□ -1.59
PRKDC-208	ENST00000536710	HOXC13	P31276	330 aa		5.15	□□□□□ -1.59
PRKDC-208	ENST00000536710	CCKBR	P32239	447 aa		5.15	□□□□□ -1.59
PRKDC-208	ENST00000536710	AHR	P35869	848 aa		5.15	□□□□□ -1.59
PRKDC-208	ENST00000536710	ARCN1	P48444	511 aa	Known RBP	5.15	□□□□□ -1.59
PRKDC-208	ENST00000536710	MMP15	P51511	669 aa		5.15	□□□□□ -1.59
PRKDC-208	ENST00000536710	SCN1B	Q07699	218 aa		5.15	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms