RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 KIR3DX1Q9H7L2 352 aa13.91□□□□□ -0.18
UBE3B-206ENST00000536398 FBXO8Q9NRD0 319 aa13.91□□□□□ -0.18
UBE3B-206ENST00000536398 TREX1Q9NSU2 369 aa13.91□□□□□ -0.18
UBE3B-206ENST00000536398 HRASLS2Q9NWW9 162 aa13.91□□□□□ -0.18
UBE3B-206ENST00000536398 EPHA6Q9UF33 1036 aa13.91□□□□□ -0.18
UBE3B-206ENST00000536398 SNX12Q9UMY4 172 aa13.91□□□□□ -0.18
UBE3B-206ENST00000536398 NEU2Q9Y3R4 380 aa13.91□□□□□ -0.18
UBE3B-206ENST00000536398 SDK2Q58EX2 2172 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 IGHV5-51A0A0C4DH38 117 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 OR6C74A6NCV1 312 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 OR5K3A6NET4 321 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 STMND1H3BQB6 276 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 K7ENP7 123 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 PGRMC1O00264 195 aaKnown RBP13.9□□□□□ -0.18
UBE3B-206ENST00000536398 TMEM63AO94886 807 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 CD82P27701 267 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 CSE1LP55060 971 aaKnown RBP13.9□□□□□ -0.18
UBE3B-206ENST00000536398 FOXM1Q08050 763 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 PRKG2Q13237 762 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 KCNAB1Q14722 419 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 FASTKD1Q53R41 847 aaKnown RBP13.9□□□□□ -0.18
UBE3B-206ENST00000536398 INO80CQ6PI98 192 aaPredicted RBP13.9□□□□□ -0.18
UBE3B-206ENST00000536398 CCDC137Q6PK04 289 aaKnown RBP13.9□□□□□ -0.18
UBE3B-206ENST00000536398 PCSK4Q6UW60 755 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 NLRP9Q7RTR0 991 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 CAND1Q86VP6 1230 aaKnown RBP13.9□□□□□ -0.18
UBE3B-206ENST00000536398 ACTRT1Q8TDG2 376 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 KLHL6Q8WZ60 621 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 CPT1BQ92523 772 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 ELMO1Q92556 727 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 MFSD3Q96ES6 412 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 ZDHHC12Q96GR4 267 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 ELMO2Q96JJ3 720 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 MAP3K3Q99759 626 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 KIFC1Q9BW19 673 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 ASPSCR1Q9BZE9 553 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 SPRY4Q9C004 299 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 IL22Q9GZX6 179 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 RAB33BQ9H082 229 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 XKR8Q9H6D3 395 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 VPS37BQ9H9H4 285 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 BFARQ9NZS9 450 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 PCDHB11Q9Y5F2 797 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 COLEC10Q9Y6Z7 277 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 CACNA1GO43497 2377 aa13.9□□□□□ -0.18
UBE3B-206ENST00000536398 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.89□□□□□ -0.19
UBE3B-206ENST00000536398 TEX51A0A1B0GUA7 166 aa13.89□□□□□ -0.19
UBE3B-206ENST00000536398 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.89□□□□□ -0.19
UBE3B-206ENST00000536398 BHMG1C9JSJ3 638 aaPredicted RBP13.89□□□□□ -0.19
UBE3B-206ENST00000536398 GOLGA8KD6RF30 607 aa13.89□□□□□ -0.19
UBE3B-206ENST00000536398 GOLGA8TH3BQL2 631 aa13.89□□□□□ -0.19
UBE3B-206ENST00000536398 GOLGA8MH3BSY2 632 aa13.89□□□□□ -0.19
UBE3B-206ENST00000536398 POLR1CO15160 346 aaPredicted RBP13.89□□□□□ -0.19
UBE3B-206ENST00000536398 TOX3O15405 576 aaPredicted RBP13.89□□□□□ -0.19
UBE3B-206ENST00000536398 CD3EAPO15446 510 aaKnown RBP13.89□□□□□ -0.19
UBE3B-206ENST00000536398 ZNF28P17035 718 aa13.89□□□□□ -0.19
UBE3B-206ENST00000536398 POLR2CP19387 275 aaPredicted RBP13.89□□□□□ -0.19
UBE3B-206ENST00000536398 ARNTP27540 789 aa13.89□□□□□ -0.19
UBE3B-206ENST00000536398 CCR7P32248 378 aa13.89□□□□□ -0.19
UBE3B-206ENST00000536398 MAGEA6P43360 314 aa13.89□□□□□ -0.19
UBE3B-206ENST00000536398 RAB15P59190 212 aa13.89□□□□□ -0.19
UBE3B-206ENST00000536398 MANEAQ5SRI9 462 aa13.89□□□□□ -0.19
UBE3B-206ENST00000536398 LYPLAL1Q5VWZ2 237 aa13.89□□□□□ -0.19
UBE3B-206ENST00000536398 CEACAM20Q6UY09 585 aa13.89□□□□□ -0.19
UBE3B-206ENST00000536398 TIPARPQ7Z3E1 657 aaKnown RBP13.89□□□□□ -0.19
UBE3B-206ENST00000536398 KRT222Q8N1A0 295 aa13.89□□□□□ -0.19
UBE3B-206ENST00000536398 SNRNP27Q8WVK2 155 aaKnown RBP13.89□□□□□ -0.19
UBE3B-206ENST00000536398 ZFPM2Q8WW38 1151 aa13.89□□□□□ -0.19
UBE3B-206ENST00000536398 TFGQ92734 400 aaPredicted RBP13.89□□□□□ -0.19
UBE3B-206ENST00000536398 PEX13Q92968 403 aa13.89□□□□□ -0.19
UBE3B-206ENST00000536398 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.89□□□□□ -0.19
UBE3B-206ENST00000536398 SGSM3Q96HU1 749 aa13.89□□□□□ -0.19
UBE3B-206ENST00000536398 OR6C1Q96RD1 312 aa13.89□□□□□ -0.19
UBE3B-206ENST00000536398 HGH1Q9BTY7 390 aa13.89□□□□□ -0.19
UBE3B-206ENST00000536398 CATSPERZQ9NTU4 200 aa13.89□□□□□ -0.19
UBE3B-206ENST00000536398 SEMA5BQ9P283 1151 aa13.89□□□□□ -0.19
UBE3B-206ENST00000536398 PILRAQ9UKJ1 303 aa13.89□□□□□ -0.19
UBE3B-206ENST00000536398 IGSF10Q6WRI0 2623 aa13.89□□□□□ -0.19
UBE3B-206ENST00000536398 ATMQ13315 3056 aa13.88□□□□□ -0.19
UBE3B-206ENST00000536398 SLC5A10A0PJK1 596 aa13.88□□□□□ -0.19
UBE3B-206ENST00000536398 IFRD1O00458 451 aaPredicted RBP13.88□□□□□ -0.19
UBE3B-206ENST00000536398 BTN3A3O00478 584 aa13.88□□□□□ -0.19
UBE3B-206ENST00000536398 RAD1O60671 282 aa13.88□□□□□ -0.19
UBE3B-206ENST00000536398 PHF2O75151 1096 aa13.88□□□□□ -0.19
UBE3B-206ENST00000536398 STK17BO94768 372 aa13.88□□□□□ -0.19
UBE3B-206ENST00000536398 VAPBO95292 243 aa13.88□□□□□ -0.19
UBE3B-206ENST00000536398 F7P08709 466 aaPredicted RBP13.88□□□□□ -0.19
UBE3B-206ENST00000536398 OR56A5P0C7T3 313 aa13.88□□□□□ -0.19
UBE3B-206ENST00000536398 TPBGLP0DKB5 382 aa13.88□□□□□ -0.19
UBE3B-206ENST00000536398 FOLR1P15328 257 aa13.88□□□□□ -0.19
UBE3B-206ENST00000536398 NELFEP18615 380 aaKnown RBP13.88□□□□□ -0.19
UBE3B-206ENST00000536398 ACADLP28330 430 aa13.88□□□□□ -0.19
UBE3B-206ENST00000536398 CD151P48509 253 aa13.88□□□□□ -0.19
UBE3B-206ENST00000536398 KPNA2P52292 529 aaKnown RBP13.88□□□□□ -0.19
UBE3B-206ENST00000536398 CYP4F2P78329 520 aa13.88□□□□□ -0.19
UBE3B-206ENST00000536398 CDK16Q00536 496 aa13.88□□□□□ -0.19
UBE3B-206ENST00000536398 RPA4Q13156 261 aa13.88□□□□□ -0.19
UBE3B-206ENST00000536398 BOP1Q14137 746 aaKnown RBP13.88□□□□□ -0.19
UBE3B-206ENST00000536398 DNTTIP2Q5QJE6 756 aaKnown RBP13.88□□□□□ -0.19
UBE3B-206ENST00000536398 OOSP2Q86WS3 158 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms