RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 RUNDC3AQ59EK9 446 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 RABL3Q5HYI8 236 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 TOR1AIP1Q5JTV8 583 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 C6orf141Q5SZD1 244 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 PLA2G4FQ68DD2 849 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 TSPYL5Q86VY4 417 aaPredicted RBP3.67□□□□□ -1.82
MCF2-210ENST00000536274 RAB43Q86YS6 212 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 SLC44A2Q8IWA5 706 aaPredicted RBP3.67□□□□□ -1.82
MCF2-210ENST00000536274 FAM71AQ8IYT1 594 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 ZFP82Q8N141 532 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 SVOPQ8N4V2 548 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 EMC1Q8N766 993 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 PLD5Q8N7P1 536 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 C3orf58Q8NDZ4 430 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 OR6M1Q8NGM8 313 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 DNAJB14Q8TBM8 379 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 ZFAND1Q8TCF1 268 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 TTC9Q92623 222 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 FOXJ1Q92949 421 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 OPALINQ96PE5 141 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 OR2A14Q96R47 310 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 ZNF300Q96RE9 604 aaPredicted RBP3.67□□□□□ -1.82
MCF2-210ENST00000536274 TUBA1CQ9BQE3 449 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 JAM3Q9BX67 310 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 MAGEB5Q9BZ81 275 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 AMBRA1Q9C0C7 1298 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 ABCG4Q9H172 646 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 FAM96AQ9H5X1 160 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 POPDC2Q9HBU9 364 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 XPNPEP3Q9NQH7 507 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 ZNF275Q9NSD4 429 aaPredicted RBP3.67□□□□□ -1.82
MCF2-210ENST00000536274 HPF1Q9NWY4 346 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 GPRC5BQ9NZH0 403 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 TMEM181Q9P2C4 612 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 MORF4L1Q9UBU8 362 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 SPATA2Q9UM82 520 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 PDE10AQ9Y233 779 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 SNX5Q9Y5X3 404 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 PARP14Q460N5 1801 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 MAGEB16A2A368 324 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 NEMP2A6NFY4 417 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 FAM74A7A6NL05 159 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 E7ESA3 106 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 LOC110117498-PIK3R3F6TDL0 507 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 F8W036 122 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 E2F3O00716 465 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 MRASO14807 208 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 NCAM2O15394 837 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 ARHGEF9O43307 516 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 NPHS1O60500 1241 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 HPGDSO60760 199 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 PPP1R11O60927 126 aaPredicted RBP3.67□□□□□ -1.82
MCF2-210ENST00000536274 SLC22A5O76082 557 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 CDK14O94921 469 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 FAM13AO94988 1023 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 GABARAPO95166 117 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 METTL18O95568 372 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 APOA1P02647 267 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 MT-ND2P03891 347 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 ADRB2P07550 413 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 ARP10275 920 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 JUNBP17275 347 aaPredicted RBP3.67□□□□□ -1.82
MCF2-210ENST00000536274 ITGA2P17301 1181 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 PAMP19021 973 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 TFEBP19484 476 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 GADD45AP24522 165 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 DNAJB1P25685 340 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 KLRK1P26718 216 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 TYK2P29597 1187 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 GKP32189 559 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 ICAM3P32942 547 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 NRIP1P48552 1158 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 KCNK10P57789 538 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 SIM2Q14190 667 aaPredicted RBP3.67□□□□□ -1.82
MCF2-210ENST00000536274 ZNF181Q2M3W8 571 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 LEXMQ3ZCV2 418 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 ZNF404Q494X3 552 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 FAM74A3Q4VXF1 159 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 AKIRIN2Q53H80 203 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 CDKL4Q5MAI5 379 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 KIAA1211LQ6NV74 962 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 DARS2Q6PI48 645 aaKnown RBP3.67□□□□□ -1.82
MCF2-210ENST00000536274 AGMOQ6ZNB7 445 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 TRILQ7L0X0 811 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 HORMAD1Q86X24 394 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 CBWD2Q8IUF1 395 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 STON2Q8WXE9 905 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 BRI3BPQ8WY22 251 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 NELL1Q92832 810 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 BTN2A3PQ96KV6 586 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 P2RX7Q99572 595 aaKnown RBP3.67□□□□□ -1.82
MCF2-210ENST00000536274 SLC30A3Q99726 388 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 SPATA9Q9BWV2 254 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 GON7Q9BXV9 100 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 KCNH6Q9H252 994 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 OR51E2Q9H255 320 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 RERGLQ9H628 205 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 ZNF408Q9H9D4 720 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 ZNF556Q9HAH1 456 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 MRM3Q9HC36 420 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms