RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 KIAA1217Q5T5P2 1943 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 TANC1Q9C0D5 1861 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 COL4A4P53420 1690 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-202ENST00000535689 PKD1L2Q7Z442 2459 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 FAM237AA0A1B0GTK4 181 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 A6NCN8 305 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 RSPH10B2B2RC85 870 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 NPIPB11E5RHQ5 1161 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 F5H6K3 240 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 CTAGE5O15320 804 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 BUD23O43709 281 aaKnown RBP3.29□□□□□ -1.88
SNHG1-202ENST00000535689 SOX30O94993 753 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 SRPRAP08240 638 aaKnown RBP3.29□□□□□ -1.88
SNHG1-202ENST00000535689 RSPH10BP0C881 870 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 STAG3L1P0CL83 205 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 EEF2P13639 858 aaKnown RBP3.29□□□□□ -1.88
SNHG1-202ENST00000535689 CD72P21854 359 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 UBA1P22314 1058 aaKnown RBP3.29□□□□□ -1.88
SNHG1-202ENST00000535689 ADORA1P30542 326 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 CTNNB1P35222 781 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 MTHFRP42898 656 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 STAT2P52630 851 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 RRP1P56182 461 aaKnown RBP3.29□□□□□ -1.88
SNHG1-202ENST00000535689 CLDN2P57739 230 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 PSMC6P62333 389 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 EEF1A1P68104 462 aaKnown RBP3.29□□□□□ -1.88
SNHG1-202ENST00000535689 SORDQ00796 357 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 GABPAQ06546 454 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 KLRC3Q07444 240 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 IKQ13123 557 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-202ENST00000535689 SIM2Q14190 667 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-202ENST00000535689 FGFBP1Q14512 234 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 CALCRLQ16602 461 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 SOWAHCQ53LP3 525 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-202ENST00000535689 DCST1Q5T197 706 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 CFAP58Q5T655 872 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 EEF1A1P5Q5VTE0 462 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 ZSCAN25Q6NSZ9 544 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 CFAP161Q6P656 301 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 LCTLQ6UWM7 567 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 TAOK1Q7L7X3 1001 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 GPSM1Q86YR5 675 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 ARID3BQ8IVW6 561 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-202ENST00000535689 AADATQ8N5Z0 425 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 ZBTB2Q8N680 514 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 FAM133AQ8N9E0 248 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 SMRP1Q8NCR6 262 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 HUS1BQ8NHY5 278 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 PPP4R1Q8TF05 950 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 NTN5Q8WTR8 489 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-202ENST00000535689 RMDN1Q96DB5 314 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 MMABQ96EY8 250 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-202ENST00000535689 CALML4Q96GE6 196 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 THOC3Q96J01 351 aaKnown RBP3.29□□□□□ -1.88
SNHG1-202ENST00000535689 CHCHD6Q9BRQ6 235 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 SLC25A33Q9BSK2 321 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 MRPL1Q9BYD6 325 aaKnown RBP3.29□□□□□ -1.88
SNHG1-202ENST00000535689 API5Q9BZZ5 524 aaKnown RBP3.29□□□□□ -1.88
SNHG1-202ENST00000535689 OSGEPL1Q9H4B0 414 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 TLE6Q9H808 572 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 SLC38A10Q9HBR0 1119 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 PCDHB16Q9NRJ7 776 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 PSD3Q9NYI0 1048 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 SLCO3A1Q9UIG8 710 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 FBXW11Q9UKB1 542 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 CORO1CQ9ULV4 474 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-202ENST00000535689 CEPT1Q9Y6K0 416 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 EPG5Q9HCE0 2579 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 ACACBO00763 2458 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 ATRXP46100 2492 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 TTC3P53804 2025 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 EP300Q09472 2414 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-202ENST00000535689 MYH6P13533 1939 aa3.29□□□□□ -1.88
SNHG1-202ENST00000535689 BAZ2AQ9UIF9 1905 aaKnown RBP3.29□□□□□ -1.88
SNHG1-202ENST00000535689 ARHGEF17Q96PE2 2063 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-202ENST00000535689 FAM208BQ5VWN6 2430 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 MED19A0JLT2 244 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-202ENST00000535689 LRRC72A6NJI9 287 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 C15orf62A8K5M9 175 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 HS3ST1O14792 307 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 TNFRSF13BO14836 293 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-202ENST00000535689 VILLO15195 856 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 INSIG1O15503 277 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 KINO60870 393 aaKnown RBP3.28□□□□□ -1.88
SNHG1-202ENST00000535689 CH25HO95992 272 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 GH1P01241 217 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 MMP1P03956 469 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 SNHG28P0DPA3 235 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 SRCP12931 536 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 AOC1P19801 751 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 MATR3P43243 847 aaKnown RBP eCLIP3.28□□□□□ -1.88
SNHG1-202ENST00000535689 VCPP55072 806 aaKnown RBP3.28□□□□□ -1.88
SNHG1-202ENST00000535689 CDH8P55286 799 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 DYNLL1P63167 89 aaKnown RBP3.28□□□□□ -1.88
SNHG1-202ENST00000535689 DEFB103AP81534 67 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 POU3F1Q03052 451 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-202ENST00000535689 HYAL1Q12794 435 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 MAD2L1Q13257 205 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-202ENST00000535689 BTG3Q14201 252 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-202ENST00000535689 PLCB4Q15147 1175 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms