RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 ARNTP27540 789 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 OAS2P29728 719 aaKnown RBP9.38□□□□□ -0.91
SSBP3-215ENST00000533946 PEBP1P30086 187 aaKnown RBP9.38□□□□□ -0.91
SSBP3-215ENST00000533946 RPS18P62269 152 aaKnown RBP9.38□□□□□ -0.91
SSBP3-215ENST00000533946 SEMA5AQ13591 1074 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 ZIC1Q15915 447 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 CLPPQ16740 277 aaPredicted RBP9.38□□□□□ -0.91
SSBP3-215ENST00000533946 LONRF2Q1L5Z9 754 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 P3H1Q32P28 736 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 CCSMST1Q4G0I0 132 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 ZNF789Q5FWF6 425 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 DCAF12Q5T6F0 453 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 TSTD2Q5T7W7 516 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 PLXDC1Q8IUK5 500 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 C2orf73Q8N5S3 287 aaPredicted RBP9.38□□□□□ -0.91
SSBP3-215ENST00000533946 TTC13Q8NBP0 860 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 TMEM159Q96B96 161 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 SH3KBP1Q96B97 665 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 CALR3Q96L12 384 aaKnown RBP9.38□□□□□ -0.91
SSBP3-215ENST00000533946 LINC00615Q96LM1 132 aaPredicted RBP9.38□□□□□ -0.91
SSBP3-215ENST00000533946 FERD3LQ96RJ6 166 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 CCM2Q9BSQ5 444 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 HGH1Q9BTY7 390 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 AP1M1Q9BXS5 423 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 POT1Q9NUX5 634 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 HRASLS2Q9NWW9 162 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 TSR3Q9UJK0 312 aaKnown RBP9.38□□□□□ -0.91
SSBP3-215ENST00000533946 ICKQ9UPZ9 632 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 RUVBL2Q9Y230 463 aaKnown RBP9.38□□□□□ -0.91
SSBP3-215ENST00000533946 CDYLQ9Y232 598 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 KLHL20Q9Y2M5 609 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 UBR5O95071 2799 aaPredicted RBP9.37□□□□□ -0.91
SSBP3-215ENST00000533946 SLC9B1P1A6NJY1 282 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 ERVH48-1M5A8F1 160 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 POLR1CO15160 346 aaPredicted RBP9.37□□□□□ -0.91
SSBP3-215ENST00000533946 KRT86O43790 486 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 NRP2O60462 931 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 PPFIA2O75334 1257 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 SPAG6O75602 509 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 ANKRD34CP0C6C1 535 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 PLA2G2AP14555 144 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 ST6GAL1P15907 406 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 NELFEP18615 380 aaKnown RBP9.37□□□□□ -0.91
SSBP3-215ENST00000533946 NR1D1P20393 614 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 ITGALP20701 1170 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 MGAT1P26572 445 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 ACADLP28330 430 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 CCR7P32248 378 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 CETN2P41208 172 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 TNNT3P45378 269 aaPredicted RBP9.37□□□□□ -0.91
SSBP3-215ENST00000533946 GSDMDP57764 484 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 YBX1P67809 324 aaKnown RBP9.37□□□□□ -0.91
SSBP3-215ENST00000533946 CACNG1Q06432 222 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 ABRQ12979 859 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 PLCL1Q15111 1095 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 CCNG2Q16589 344 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 SEL1L2Q5TEA6 688 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 ZDHHC20Q5W0Z9 365 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 PRSS42Q7Z5A4 293 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 ADGRF3Q8IZF5 1079 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 DTWD1Q8N5C7 304 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 IL22RA1Q8N6P7 574 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 AMER2Q8N7J2 671 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 DNAAF3Q8N9W5 541 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 OR52E1Q8NGJ3 308 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 FLVCR1-AS1Q8TAF5 88 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 STYXQ8WUJ0 223 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 FAM136AQ96C01 138 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 MFSD3Q96ES6 412 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 DCUN1D1Q96GG9 259 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 SLC41A2Q96JW4 573 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 ANP32EQ9BTT0 268 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.37□□□□□ -0.91
SSBP3-215ENST00000533946 TRIM4Q9C037 500 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 KIR3DX1Q9H7L2 352 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 FAM60AQ9NP50 221 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 SYBUQ9NX95 663 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 TRMT1Q9NXH9 659 aaKnown RBP9.37□□□□□ -0.91
SSBP3-215ENST00000533946 SEMA5BQ9P283 1151 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 EPHA6Q9UF33 1036 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 CROTQ9UKG9 612 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 TCAF1Q9Y4C2 921 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 TMEM184BQ9Y519 407 aaPredicted RBP9.37□□□□□ -0.91
SSBP3-215ENST00000533946 DNMT3AQ9Y6K1 912 aaPredicted RBP9.37□□□□□ -0.91
SSBP3-215ENST00000533946 SEC16AO15027 2179 aa9.37□□□□□ -0.91
SSBP3-215ENST00000533946 FLNBO75369 2602 aaKnown RBP9.36□□□□□ -0.91
SSBP3-215ENST00000533946 ASH1LQ9NR48 2969 aaKnown RBP9.36□□□□□ -0.91
SSBP3-215ENST00000533946 SPTA1P02549 2419 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 MYO18BQ8IUG5 2567 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 NBASA2RRP1 2371 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 SLC5A10A0PJK1 596 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 MASP2O00187 686 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 BANF1O75531 89 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 TMEM63AO94886 807 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 CCDC175P0C221 793 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 SLC35G4P0C7Q5 338 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 SLC2A4P14672 509 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 HALP42357 657 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 LMAN1P49257 510 aa9.36□□□□□ -0.91
SSBP3-215ENST00000533946 PGGT1BP53609 377 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms