RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 NEPROQ6NW34 567 aa19.95■□□□□ 0.78
CCS-208ENST00000533244 PLXDC1Q8IUK5 500 aa19.95■□□□□ 0.78
CCS-208ENST00000533244 LPGAT1Q92604 370 aa19.95■□□□□ 0.78
CCS-208ENST00000533244 STAMBPL1Q96FJ0 436 aa19.95■□□□□ 0.78
CCS-208ENST00000533244 C16orf45Q96MC5 204 aaPredicted RBP19.95■□□□□ 0.78
CCS-208ENST00000533244 SLC24A2Q9UI40 661 aa19.95■□□□□ 0.78
CCS-208ENST00000533244 URB1O60287 2271 aaKnown RBP19.95■□□□□ 0.78
CCS-208ENST00000533244 NDUFS3O75489 264 aa19.94■□□□□ 0.78
CCS-208ENST00000533244 ANKRD34CP0C6C1 535 aa19.94■□□□□ 0.78
CCS-208ENST00000533244 AMD1P17707 334 aa19.94■□□□□ 0.78
CCS-208ENST00000533244 ITIH1P19827 911 aa19.94■□□□□ 0.78
CCS-208ENST00000533244 ACADLP28330 430 aa19.94■□□□□ 0.78
CCS-208ENST00000533244 CCR7P32248 378 aa19.94■□□□□ 0.78
CCS-208ENST00000533244 ETV5P41161 510 aa19.94■□□□□ 0.78
CCS-208ENST00000533244 ADARP55265 1226 aaKnown RBP19.94■□□□□ 0.78
CCS-208ENST00000533244 GFERP55789 205 aa19.94■□□□□ 0.78
CCS-208ENST00000533244 DHX9Q08211 1270 aaKnown RBP19.94■□□□□ 0.78
CCS-208ENST00000533244 RNF187Q5TA31 235 aaPredicted RBP19.94■□□□□ 0.78
CCS-208ENST00000533244 ZNF449Q6P9G9 518 aa19.94■□□□□ 0.78
CCS-208ENST00000533244 FOXR1Q6PIV2 292 aa19.94■□□□□ 0.78
CCS-208ENST00000533244 CENPUQ71F23 418 aa19.94■□□□□ 0.78
CCS-208ENST00000533244 SDCCAG8Q86SQ7 713 aaPredicted RBP19.94■□□□□ 0.78
CCS-208ENST00000533244 CILP2Q8IUL8 1156 aa19.94■□□□□ 0.78
CCS-208ENST00000533244 SNF8Q96H20 258 aa19.94■□□□□ 0.78
CCS-208ENST00000533244 BIRC8Q96P09 236 aa19.94■□□□□ 0.78
CCS-208ENST00000533244 ZMYND15Q9H091 742 aa19.94■□□□□ 0.78
CCS-208ENST00000533244 GNPTGQ9UJJ9 305 aa19.94■□□□□ 0.78
CCS-208ENST00000533244 CDYLQ9Y232 598 aa19.94■□□□□ 0.78
CCS-208ENST00000533244 PCDHGA7Q9Y5G6 932 aa19.94■□□□□ 0.78
CCS-208ENST00000533244 MAD1L1Q9Y6D9 718 aa19.94■□□□□ 0.78
CCS-208ENST00000533244 FAM169AQ9Y6X4 670 aa19.94■□□□□ 0.78
CCS-208ENST00000533244 COLEC10Q9Y6Z7 277 aa19.94■□□□□ 0.78
CCS-208ENST00000533244 ZFHX4Q86UP3 3567 aa19.94■□□□□ 0.78
CCS-208ENST00000533244 CACNA1BQ00975 2339 aa19.94■□□□□ 0.78
CCS-208ENST00000533244 A0A087WV48 116 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 IQCF5A8MTL0 148 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 BHMG1C9JSJ3 638 aaPredicted RBP19.93■□□□□ 0.78
CCS-208ENST00000533244 IFRD1O00458 451 aaPredicted RBP19.93■□□□□ 0.78
CCS-208ENST00000533244 GPC4O75487 556 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 JMJD7P0C870 316 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 PGAM1P18669 254 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 EIF2S3P41091 472 aaKnown RBP19.93■□□□□ 0.78
CCS-208ENST00000533244 PPM1FP49593 454 aaPredicted RBP19.93■□□□□ 0.78
CCS-208ENST00000533244 BOP1Q14137 746 aaKnown RBP19.93■□□□□ 0.78
CCS-208ENST00000533244 DNAJC21Q5F1R6 531 aaKnown RBP19.93■□□□□ 0.78
CCS-208ENST00000533244 CTSL3PQ5NE16 218 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 AGBL5Q8NDL9 886 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 TFGQ92734 400 aaPredicted RBP19.93■□□□□ 0.78
CCS-208ENST00000533244 C9orf72Q96LT7 481 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 EBNA1BP2Q99848 306 aaKnown RBP19.93■□□□□ 0.78
CCS-208ENST00000533244 TSSK1BQ9BXA7 367 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 B3GNT4Q9C0J1 378 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 IL1RAPL1Q9NZN1 696 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 AKAP7Q9P0M2 348 aaPredicted RBP19.93■□□□□ 0.78
CCS-208ENST00000533244 PISDQ9UG56 409 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 FAM187AA6NFU0 413 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 EFCAB8A8MWE9 144 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 TOX3O15405 576 aaPredicted RBP19.93■□□□□ 0.78
CCS-208ENST00000533244 CAPN5O15484 640 aaPredicted RBP19.93■□□□□ 0.78
CCS-208ENST00000533244 CCL4P13236 92 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 AOAHP28039 575 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 RPL21P46778 160 aaKnown RBP19.93■□□□□ 0.78
CCS-208ENST00000533244 ITGA8P53708 1063 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 C2orf54Q08AI8 447 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 CBLBQ13191 982 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 LONRF1Q17RB8 773 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 NAPRTQ6XQN6 538 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 LMNTD2Q8IXW0 634 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 SLC22A15Q8IZD6 547 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 OTUD6BQ8N6M0 293 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 ACVR1CQ8NER5 493 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 JPH3Q8WXH2 748 aaPredicted RBP19.93■□□□□ 0.78
CCS-208ENST00000533244 NAT9Q9BTE0 207 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 MVB12BQ9H7P6 319 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 INTS10Q9NVR2 710 aaKnown RBP19.93■□□□□ 0.78
CCS-208ENST00000533244 ACSL6Q9UKU0 697 aa19.93■□□□□ 0.78
CCS-208ENST00000533244 PFDN6O15212 129 aa19.92■□□□□ 0.78
CCS-208ENST00000533244 NVLO15381 856 aaKnown RBP19.92■□□□□ 0.78
CCS-208ENST00000533244 RAD51CO43502 376 aa19.92■□□□□ 0.78
CCS-208ENST00000533244 BANF1O75531 89 aa19.92■□□□□ 0.78
CCS-208ENST00000533244 FGF3P11487 239 aaPredicted RBP19.92■□□□□ 0.78
CCS-208ENST00000533244 ITGB6P18564 788 aa19.92■□□□□ 0.78
CCS-208ENST00000533244 CSTF2P33240 577 aaKnown RBP eCLIP19.92■□□□□ 0.78
CCS-208ENST00000533244 LEPRP48357 1165 aaKnown RBP19.92■□□□□ 0.78
CCS-208ENST00000533244 PCBP4P57723 403 aaKnown RBP19.92■□□□□ 0.78
CCS-208ENST00000533244 CRYMQ14894 314 aa19.92■□□□□ 0.78
CCS-208ENST00000533244 BRD3Q15059 726 aa19.92■□□□□ 0.78
CCS-208ENST00000533244 PLCL1Q15111 1095 aa19.92■□□□□ 0.78
CCS-208ENST00000533244 SYTL3Q4VX76 610 aa19.92■□□□□ 0.78
CCS-208ENST00000533244 ZNF470Q6ECI4 717 aa19.92■□□□□ 0.78
CCS-208ENST00000533244 PTRHD1Q6GMV3 140 aaKnown RBP19.92■□□□□ 0.78
CCS-208ENST00000533244 KLHL35Q6PF15 583 aa19.92■□□□□ 0.78
CCS-208ENST00000533244 MAATS1Q7Z4T9 603 aa19.92■□□□□ 0.78
CCS-208ENST00000533244 PRSS42Q7Z5A4 293 aa19.92■□□□□ 0.78
CCS-208ENST00000533244 PDIK1LQ8N165 341 aa19.92■□□□□ 0.78
CCS-208ENST00000533244 KRT222Q8N1A0 295 aa19.92■□□□□ 0.78
CCS-208ENST00000533244 BMPERQ8N8U9 685 aa19.92■□□□□ 0.78
CCS-208ENST00000533244 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.92■□□□□ 0.78
CCS-208ENST00000533244 ASZ1Q8WWH4 475 aa19.92■□□□□ 0.78
CCS-208ENST00000533244 PANX3Q96QZ0 392 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms