RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 RETSATQ6NUM9 610 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 CDC42EP5Q6NZY7 148 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 CUZD1Q86UP6 607 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 MIER2Q8N344 545 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 OR5K1Q8NHB7 308 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 IL31RAQ8NI17 732 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 PYCR2Q96C36 320 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 ASIC4Q96FT7 647 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 FAM213AQ9BRX8 229 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 WACQ9BTA9 647 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 SHARPINQ9H0F6 387 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 IL1RAPQ9NPH3 570 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 PAK6Q9NQU5 681 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-214ENST00000530886 KCNH7Q9NS40 1196 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 ING3Q9NXR8 418 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 FNIP2Q9P278 1114 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 KIF17Q9P2E2 1029 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 XPR1Q9UBH6 696 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 SRP68Q9UHB9 627 aaKnown RBP8.01□□□□□ -1.13
CSDE1-214ENST00000530886 TMEFF2Q9UIK5 374 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-214ENST00000530886 AGO1Q9UL18 857 aaKnown RBP8.01□□□□□ -1.13
CSDE1-214ENST00000530886 FZD1Q9UP38 647 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 RUVBL2Q9Y230 463 aaKnown RBP8.01□□□□□ -1.13
CSDE1-214ENST00000530886 MAN2B2Q9Y2E5 1009 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 KLK4Q9Y5K2 254 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 A0A1W2PP18 115 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 PCP4L1A6NKN8 68 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 M0R082 166 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 NR5A2O00482 541 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 RNGTTO60942 597 aaKnown RBP8.01□□□□□ -1.13
CSDE1-214ENST00000530886 USP2O75604 605 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-214ENST00000530886 STAU1O95793 577 aaKnown RBP8.01□□□□□ -1.13
CSDE1-214ENST00000530886 ALAS2P22557 587 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 SDC4P31431 198 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 CA5AP35218 305 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 CYP4F2P78329 520 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 CYP4F3Q08477 520 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 IRF3Q14653 427 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 MFSD14BQ5SR56 506 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 SLC35F1Q5T1Q4 408 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 MLIPQ5VWP3 458 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 GPR139Q6DWJ6 353 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 ZNF704Q6ZNC4 412 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-214ENST00000530886 SMIM5Q71RC9 77 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 PHYKPLQ8IUZ5 450 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 CDH26Q8IXH8 852 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 CNIH3Q8TBE1 160 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 KCTD4Q8WVF5 259 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 CDCA5Q96FF9 252 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 MSANTD3Q96H12 275 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 B3GALT6Q96L58 329 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 CCDC17Q96LX7 622 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 RHOJQ9H4E5 214 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 GORASP2Q9H8Y8 452 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 FANCFQ9NPI8 374 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 ANKEF1Q9NU02 776 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 DPP3Q9NY33 737 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 GTSE1Q9NYZ3 720 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 PTTG3PQ9NZH4 202 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 POLLQ9UGP5 575 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 KLHL20Q9Y2M5 609 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 PCDHB14Q9Y5E9 798 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 UBIAD1Q9Y5Z9 338 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 USP3Q9Y6I4 520 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 EP400Q96L91 3159 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 SPATA31C2B4DYI2 1134 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 PROM1O43490 865 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 PGLSO95336 258 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 KELP23276 732 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 MAOBP27338 520 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 TKTL1P51854 596 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 HUNKP57058 714 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 CRADDP78560 199 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 FLI1Q01543 452 aaPredicted RBP8□□□□□ -1.13
CSDE1-214ENST00000530886 ZNF267Q14586 743 aaPredicted RBP8□□□□□ -1.13
CSDE1-214ENST00000530886 GRK1Q15835 563 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 FAM214AQ32MH5 1076 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 NOL9Q5SY16 702 aaKnown RBP8□□□□□ -1.13
CSDE1-214ENST00000530886 DENND1BQ6P3S1 775 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 C19orf48Q6RUI8 117 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 SLC26A9Q7LBE3 791 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 GDPD1Q8N9F7 314 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 SREK1IP1Q8N9Q2 155 aaPredicted RBP8□□□□□ -1.13
CSDE1-214ENST00000530886 TEKT5Q96M29 485 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 TRNT1Q96Q11 434 aaKnown RBP8□□□□□ -1.13
CSDE1-214ENST00000530886 C11orf84Q9BUA3 381 aaPredicted RBP8□□□□□ -1.13
CSDE1-214ENST00000530886 SRRQ9GZT4 340 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 SMURF2Q9HAU4 748 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 CYP3A43Q9HB55 503 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 C14orf119Q9NWQ9 140 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 DCAF16Q9NXF7 216 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 MAFFQ9ULX9 164 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 MAGED2Q9UNF1 606 aaPredicted RBP8□□□□□ -1.13
CSDE1-214ENST00000530886 MAPRE3Q9UPY8 281 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 COL1A2P08123 1366 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 A0A0B4J203 849 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 C2CD4BA6NLJ0 364 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 E5RI56 91 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 PRSS44E7EML9 344 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 KHNYNO15037 678 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms