RNA–Protein interactions for RNA: ENST00000529506.5

CMTM1-213, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-213ENST00000529506 DEFB109BQ30KR1 87 aa17.3■□□□□ 0.36
CMTM1-213ENST00000529506 D2HGDHQ8N465 521 aa17.3■□□□□ 0.36
CMTM1-213ENST00000529506 SLC35B2Q8TB61 432 aa17.3■□□□□ 0.36
CMTM1-213ENST00000529506 CDKN2AIPNLQ96HQ2 116 aa17.3■□□□□ 0.36
CMTM1-213ENST00000529506 FERD3LQ96RJ6 166 aa17.3■□□□□ 0.36
CMTM1-213ENST00000529506 TTC1Q99614 292 aa17.3■□□□□ 0.36
CMTM1-213ENST00000529506 GPR87Q9BY21 358 aa17.3■□□□□ 0.36
CMTM1-213ENST00000529506 FAM96AQ9H5X1 160 aa17.3■□□□□ 0.36
CMTM1-213ENST00000529506 FAM8A1Q9UBU6 413 aa17.3■□□□□ 0.36
CMTM1-213ENST00000529506 CROTQ9UKG9 612 aa17.3■□□□□ 0.36
CMTM1-213ENST00000529506 PCDHGA6Q9Y5G7 932 aa17.3■□□□□ 0.36
CMTM1-213ENST00000529506 IGLV3-16A0A075B6K0 115 aa17.29■□□□□ 0.36
CMTM1-213ENST00000529506 TRBV5-4A0A0C4DH59 114 aa17.29■□□□□ 0.36
CMTM1-213ENST00000529506 METTL18O95568 372 aa17.29■□□□□ 0.36
CMTM1-213ENST00000529506 AP2A1O95782 977 aa17.29■□□□□ 0.36
CMTM1-213ENST00000529506 FOLR1P15328 257 aa17.29■□□□□ 0.36
CMTM1-213ENST00000529506 ACRV1P26436 265 aa17.29■□□□□ 0.36
CMTM1-213ENST00000529506 CDC25BP30305 580 aa17.29■□□□□ 0.36
CMTM1-213ENST00000529506 TUBB4BP68371 445 aa17.29■□□□□ 0.36
CMTM1-213ENST00000529506 KLF1Q13351 362 aaPredicted RBP17.29■□□□□ 0.36
CMTM1-213ENST00000529506 TUBB2AQ13885 445 aa17.29■□□□□ 0.36
CMTM1-213ENST00000529506 SERPINA9Q86WD7 417 aa17.29■□□□□ 0.36
CMTM1-213ENST00000529506 SPDYE1Q8NFV5 336 aaPredicted RBP17.29■□□□□ 0.36
CMTM1-213ENST00000529506 OR4E2Q8NGC2 313 aa17.29■□□□□ 0.36
CMTM1-213ENST00000529506 LCN9Q8WX39 176 aa17.29■□□□□ 0.36
CMTM1-213ENST00000529506 HES6Q96HZ4 224 aa17.29■□□□□ 0.36
CMTM1-213ENST00000529506 DNAJC1Q96KC8 554 aaKnown RBP17.29■□□□□ 0.36
CMTM1-213ENST00000529506 TMEM121Q9BTD3 319 aa17.29■□□□□ 0.36
CMTM1-213ENST00000529506 TUBB2BQ9BVA1 445 aa17.29■□□□□ 0.36
CMTM1-213ENST00000529506 TSGA10Q9BZW7 698 aa17.29■□□□□ 0.36
CMTM1-213ENST00000529506 SRMSQ9H3Y6 488 aa17.29■□□□□ 0.36
CMTM1-213ENST00000529506 MVB12BQ9H7P6 319 aa17.29■□□□□ 0.36
CMTM1-213ENST00000529506 FANCEQ9HB96 536 aa17.29■□□□□ 0.36
CMTM1-213ENST00000529506 LHX9Q9NQ69 397 aa17.29■□□□□ 0.36
CMTM1-213ENST00000529506 C1GALT1Q9NS00 363 aa17.29■□□□□ 0.36
CMTM1-213ENST00000529506 KCND1Q9NSA2 647 aa17.29■□□□□ 0.36
CMTM1-213ENST00000529506 ANAPC2Q9UJX6 822 aa17.29■□□□□ 0.36
CMTM1-213ENST00000529506 POLHQ9Y253 713 aa17.29■□□□□ 0.36
CMTM1-213ENST00000529506 DDX3YO15523 660 aaKnown RBP17.28■□□□□ 0.36
CMTM1-213ENST00000529506 SGTAO43765 313 aa17.28■□□□□ 0.36
CMTM1-213ENST00000529506 FTCDO95954 541 aa17.28■□□□□ 0.36
CMTM1-213ENST00000529506 KLK3P07288 261 aaPredicted RBP17.28■□□□□ 0.36
CMTM1-213ENST00000529506 TPH1P17752 444 aa17.28■□□□□ 0.36
CMTM1-213ENST00000529506 OAS2P29728 719 aaKnown RBP17.28■□□□□ 0.36
CMTM1-213ENST00000529506 NSG1P42857 185 aa17.28■□□□□ 0.36
CMTM1-213ENST00000529506 RPS15P62841 145 aaKnown RBP17.28■□□□□ 0.36
CMTM1-213ENST00000529506 PLOD1Q02809 727 aaPredicted RBP17.28■□□□□ 0.36
CMTM1-213ENST00000529506 SEL1L2Q5TEA6 688 aa17.28■□□□□ 0.36
CMTM1-213ENST00000529506 LYPLAL1Q5VWZ2 237 aa17.28■□□□□ 0.36
CMTM1-213ENST00000529506 C9orf43Q8TAL5 461 aaPredicted RBP17.28■□□□□ 0.36
CMTM1-213ENST00000529506 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.28■□□□□ 0.36
CMTM1-213ENST00000529506 TFB2MQ9H5Q4 396 aaKnown RBP17.28■□□□□ 0.36
CMTM1-213ENST00000529506 COG4Q9H9E3 785 aa17.28■□□□□ 0.36
CMTM1-213ENST00000529506 PACSIN2Q9UNF0 486 aaPredicted RBP17.28■□□□□ 0.36
CMTM1-213ENST00000529506 PIKFYVEQ9Y2I7 2098 aa17.28■□□□□ 0.36
CMTM1-213ENST00000529506 PIPSLA2A3N6 862 aa17.27■□□□□ 0.36
CMTM1-213ENST00000529506 KRT86O43790 486 aa17.27■□□□□ 0.36
CMTM1-213ENST00000529506 CREG1O75629 220 aa17.27■□□□□ 0.36
CMTM1-213ENST00000529506 ZIC2O95409 532 aaPredicted RBP17.27■□□□□ 0.36
CMTM1-213ENST00000529506 EBLN1P0CF75 366 aa17.27■□□□□ 0.36
CMTM1-213ENST00000529506 POLR2CP19387 275 aaPredicted RBP17.27■□□□□ 0.36
CMTM1-213ENST00000529506 CDH3P22223 829 aa17.27■□□□□ 0.36
CMTM1-213ENST00000529506 PPARGP37231 505 aaPredicted RBP17.27■□□□□ 0.36
CMTM1-213ENST00000529506 FDFT1P37268 417 aa17.27■□□□□ 0.36
CMTM1-213ENST00000529506 LMAN1P49257 510 aa17.27■□□□□ 0.36
CMTM1-213ENST00000529506 PPP1CAP62136 330 aa17.27■□□□□ 0.36
CMTM1-213ENST00000529506 CDH17Q12864 832 aa17.27■□□□□ 0.36
CMTM1-213ENST00000529506 DNASE1L3Q13609 305 aa17.27■□□□□ 0.36
CMTM1-213ENST00000529506 ERV3-1Q14264 604 aa17.27■□□□□ 0.36
CMTM1-213ENST00000529506 ITIH4Q14624 930 aa17.27■□□□□ 0.36
CMTM1-213ENST00000529506 POU6F1Q14863 301 aa17.27■□□□□ 0.36
CMTM1-213ENST00000529506 PWWP2BQ6NUJ5 590 aa17.27■□□□□ 0.36
CMTM1-213ENST00000529506 TMEM139Q8IV31 216 aa17.27■□□□□ 0.36
CMTM1-213ENST00000529506 DNAAF3Q8N9W5 541 aa17.27■□□□□ 0.36
CMTM1-213ENST00000529506 TFGQ92734 400 aaPredicted RBP17.27■□□□□ 0.36
CMTM1-213ENST00000529506 RMDN2Q96LZ7 410 aa17.27■□□□□ 0.36
CMTM1-213ENST00000529506 LATS2Q9NRM7 1088 aa17.27■□□□□ 0.36
CMTM1-213ENST00000529506 SOHLH2Q9NX45 425 aa17.27■□□□□ 0.36
CMTM1-213ENST00000529506 SMARCAL1Q9NZC9 954 aa17.27■□□□□ 0.36
CMTM1-213ENST00000529506 BTRCQ9Y297 605 aa17.27■□□□□ 0.36
CMTM1-213ENST00000529506 MKRN2OSH3BPM6 223 aa17.26■□□□□ 0.35
CMTM1-213ENST00000529506 TERTO14746 1132 aaKnown RBP17.26■□□□□ 0.35
CMTM1-213ENST00000529506 LIN7AO14910 233 aaPredicted RBP17.26■□□□□ 0.35
CMTM1-213ENST00000529506 KDM1AO60341 852 aa17.26■□□□□ 0.35
CMTM1-213ENST00000529506 CPNE3O75131 537 aaKnown RBP17.26■□□□□ 0.35
CMTM1-213ENST00000529506 FTH1P02794 183 aa17.26■□□□□ 0.35
CMTM1-213ENST00000529506 NTRK1P04629 796 aa17.26■□□□□ 0.35
CMTM1-213ENST00000529506 F8A1P23610 371 aa17.26■□□□□ 0.35
CMTM1-213ENST00000529506 PSMA3P25788 255 aa17.26■□□□□ 0.35
CMTM1-213ENST00000529506 GSDMDP57764 484 aa17.26■□□□□ 0.35
CMTM1-213ENST00000529506 KCNAB1Q14722 419 aa17.26■□□□□ 0.35
CMTM1-213ENST00000529506 DUS1LQ6P1R4 473 aaKnown RBP17.26■□□□□ 0.35
CMTM1-213ENST00000529506 TMEM126BQ8IUX1 230 aa17.26■□□□□ 0.35
CMTM1-213ENST00000529506 ABHD17AQ96GS6 310 aa17.26■□□□□ 0.35
CMTM1-213ENST00000529506 TWSG1Q9GZX9 223 aa17.26■□□□□ 0.35
CMTM1-213ENST00000529506 OR52A5Q9H2C5 316 aa17.26■□□□□ 0.35
CMTM1-213ENST00000529506 SERTAD3Q9UJW9 196 aa17.26■□□□□ 0.35
CMTM1-213ENST00000529506 ZNF148Q9UQR1 794 aa17.26■□□□□ 0.35
CMTM1-213ENST00000529506 MRPS18BQ9Y676 258 aaKnown RBP17.26■□□□□ 0.35
CMTM1-213ENST00000529506 KCNMB2Q9Y691 235 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms