RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 TPBGLP0DKB5 382 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 MTHFD1P11586 935 aaKnown RBP4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 HGFP14210 728 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 GLB1P16278 677 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 POLR2CP19387 275 aaPredicted RBP4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 ACP1P24666 158 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 AOAHP28039 575 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 ACADLP28330 430 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 CD1CP29017 333 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 CSF2RBP32927 897 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 PPARGP37231 505 aaPredicted RBP4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 HALP42357 657 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 SLCO1A2P46721 670 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 LEPRP48357 1165 aaKnown RBP4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 CD151P48509 253 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 RPIAP49247 311 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 CLCN7P51798 805 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 PMS2P54278 862 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 GFERP55789 205 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 TAS2R39P59534 338 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 UBE2IP63279 158 aaKnown RBP4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 INSM1Q01101 510 aaPredicted RBP4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 CFHR1Q03591 330 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 DMPKQ09013 629 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 TARDBPQ13148 414 aaKnown RBP eCLIP4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 TSTA3Q13630 321 aaPredicted RBP4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 SLMAPQ14BN4 828 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 PLCL1Q15111 1095 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 KLHL38Q2WGJ6 581 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 MAP9Q49MG5 647 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 PHF19Q5T6S3 580 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 RNF187Q5TA31 235 aaPredicted RBP4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 HES3Q5TGS1 186 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 HECTD2Q5U5R9 776 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 CAPRIN2Q6IMN6 1127 aaKnown RBP4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 LVRNQ6Q4G3 990 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 PAQR3Q6TCH7 311 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 TMEM207Q6UWW9 146 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 CCNI2Q6ZMN8 369 aaPredicted RBP4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 FAM92BQ6ZTR7 304 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 OTOAQ7RTW8 1153 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 SPRED1Q7Z699 444 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 CMC1Q7Z7K0 106 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 SLC9B2Q86UD5 537 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 TRIM73Q86UV7 250 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 ZC3HC1Q86WB0 502 aaKnown RBP4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 C17orf82Q86X59 251 aaPredicted RBP4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 CEP97Q8IW35 865 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 ZBTB2Q8N680 514 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 FAM181AQ8N9Y4 354 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 PPFIBP2Q8ND30 876 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 RCBTB1Q8NDN9 531 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 OR4E2Q8NGC2 313 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 OR10G6Q8NH81 332 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 OR2W6PQ8NHA6 318 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 CD200R1Q8TD46 325 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 CALML6Q8TD86 181 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 HEXDCQ8WVB3 486 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 EEF1AKMT1Q8WVE0 214 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 UBLCP1Q8WVY7 318 aaPredicted RBP4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 UBXN4Q92575 508 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 TFGQ92734 400 aaPredicted RBP4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 GLMNQ92990 594 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 TMEM159Q96B96 161 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 AHCYL2Q96HN2 611 aaKnown RBP4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 SGSM3Q96HU1 749 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 ZNF514Q96K75 400 aaPredicted RBP4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 LINC00615Q96LM1 132 aaPredicted RBP4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 TGM7Q96PF1 710 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 TCF12Q99081 682 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 SLC38A3Q99624 504 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 C19orf43Q9BQ61 176 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 NAT9Q9BTE0 207 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 AARSD1Q9BTE6 412 aaKnown RBP4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 PARD6BQ9BYG5 372 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 CCDC68Q9H2F9 335 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 SEMA6CQ9H3T2 930 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 LRRN3Q9H3W5 708 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 SLC40A1Q9NP59 571 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 INTS10Q9NVR2 710 aaKnown RBP4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 OGFRQ9NZT2 677 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 ADAMTS6Q9UKP5 1117 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 SLC39A10Q9ULF5 831 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 APOBEC2Q9Y235 224 aaKnown RBP4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 ASF1AQ9Y294 204 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 KLHL20Q9Y2M5 609 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 PCDHB1Q9Y5F3 818 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 SPAG17Q6Q759 2223 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 DMXL1Q9Y485 3027 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 CACNA1HO95180 2353 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 IGHV1OR21-1A0A087WYE8 117 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 KIR2DS5A0A0G2JLQ3 304 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 A0A0G2JNG1 304 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 C17orf113A0A1B0GUU1 675 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 A0A1W2PNU3 283 aaPredicted RBP4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 H3BMM5 538 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 KIR2DS3K7RE56 304 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 IFRD1O00458 451 aaPredicted RBP4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 LIN7AO14910 233 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms