RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 PTK6Q13882 451 aa20.38■□□□□ 0.85
TRAPPC9-215ENST00000524162 RNF187Q5TA31 235 aaPredicted RBP20.38■□□□□ 0.85
TRAPPC9-215ENST00000524162 BROXQ5VW32 411 aa20.38■□□□□ 0.85
TRAPPC9-215ENST00000524162 ANKRD22Q5VYY1 191 aa20.38■□□□□ 0.85
TRAPPC9-215ENST00000524162 MRNIPQ6NTE8 343 aa20.38■□□□□ 0.85
TRAPPC9-215ENST00000524162 TMEM135Q86UB9 458 aa20.38■□□□□ 0.85
TRAPPC9-215ENST00000524162 PDZD3Q86UT5 571 aa20.38■□□□□ 0.85
TRAPPC9-215ENST00000524162 HOOK3Q86VS8 718 aa20.38■□□□□ 0.85
TRAPPC9-215ENST00000524162 ACVR1CQ8NER5 493 aa20.38■□□□□ 0.85
TRAPPC9-215ENST00000524162 SPDYE1Q8NFV5 336 aaPredicted RBP20.38■□□□□ 0.85
TRAPPC9-215ENST00000524162 SNRNP27Q8WVK2 155 aaKnown RBP20.38■□□□□ 0.85
TRAPPC9-215ENST00000524162 KLHL6Q8WZ60 621 aa20.38■□□□□ 0.85
TRAPPC9-215ENST00000524162 RSC1A1Q92681 617 aa20.38■□□□□ 0.85
TRAPPC9-215ENST00000524162 USP7Q93009 1102 aa20.38■□□□□ 0.85
TRAPPC9-215ENST00000524162 SERPINB12Q96P63 405 aa20.38■□□□□ 0.85
TRAPPC9-215ENST00000524162 ZNF768Q9H5H4 540 aaKnown RBP20.38■□□□□ 0.85
TRAPPC9-215ENST00000524162 TFB2MQ9H5Q4 396 aaKnown RBP20.38■□□□□ 0.85
TRAPPC9-215ENST00000524162 PRSS21Q9Y6M0 314 aa20.38■□□□□ 0.85
TRAPPC9-215ENST00000524162 PRAMEF33A0A0G2JMD5 474 aa20.37■□□□□ 0.85
TRAPPC9-215ENST00000524162 SLC5A10A0PJK1 596 aa20.37■□□□□ 0.85
TRAPPC9-215ENST00000524162 C9orf172C9J069 976 aa20.37■□□□□ 0.85
TRAPPC9-215ENST00000524162 MATN2O00339 956 aa20.37■□□□□ 0.85
TRAPPC9-215ENST00000524162 LIPCP11150 499 aa20.37■□□□□ 0.85
TRAPPC9-215ENST00000524162 TYRP1P17643 537 aa20.37■□□□□ 0.85
TRAPPC9-215ENST00000524162 MAPK9P45984 424 aa20.37■□□□□ 0.85
TRAPPC9-215ENST00000524162 PPM1FP49593 454 aaPredicted RBP20.37■□□□□ 0.85
TRAPPC9-215ENST00000524162 PPP1R7Q15435 360 aa20.37■□□□□ 0.85
TRAPPC9-215ENST00000524162 TYSND1Q2T9J0 566 aa20.37■□□□□ 0.85
TRAPPC9-215ENST00000524162 CYB5D1Q6P9G0 228 aa20.37■□□□□ 0.85
TRAPPC9-215ENST00000524162 DTX1Q86Y01 620 aa20.37■□□□□ 0.85
TRAPPC9-215ENST00000524162 KMT5CQ86Y97 462 aa20.37■□□□□ 0.85
TRAPPC9-215ENST00000524162 LMNTD2Q8IXW0 634 aa20.37■□□□□ 0.85
TRAPPC9-215ENST00000524162 LILRA3Q8N6C8 439 aaPredicted RBP20.37■□□□□ 0.85
TRAPPC9-215ENST00000524162 NAT14Q8WUY8 206 aa20.37■□□□□ 0.85
TRAPPC9-215ENST00000524162 UBXN4Q92575 508 aa20.37■□□□□ 0.85
TRAPPC9-215ENST00000524162 MFSD3Q96ES6 412 aa20.37■□□□□ 0.85
TRAPPC9-215ENST00000524162 SIDT1Q9NXL6 827 aaKnown RBP20.37■□□□□ 0.85
TRAPPC9-215ENST00000524162 SAMD15Q9P1V8 674 aa20.37■□□□□ 0.85
TRAPPC9-215ENST00000524162 OR5K3A6NET4 321 aa20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 KPNA5O15131 536 aa20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 OR1I1O60431 355 aa20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 PRAMEF10O60809 474 aa20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 OGNP20774 298 aaKnown RBP20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 MPSTP25325 297 aa20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 ACADLP28330 430 aa20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 PAFAH1B1P43034 410 aa20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 PTGIRP43119 386 aa20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 ARCN1P48444 511 aaKnown RBP20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 MAPK10P53779 464 aa20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 BOP1Q14137 746 aaKnown RBP20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 SEMA3AQ14563 771 aa20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 PLCL1Q15111 1095 aa20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 DCAF12Q5T6F0 453 aa20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 RNASEH2BQ5TBB1 312 aaKnown RBP20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 SDCCAG8Q86SQ7 713 aaPredicted RBP20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 JAMLQ86YT9 394 aa20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 HNRNPLLQ8WVV9 542 aaKnown RBP20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 ASZ1Q8WWH4 475 aa20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 ELMO1Q92556 727 aa20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 TFGQ92734 400 aaPredicted RBP20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 DDX47Q9H0S4 455 aaKnown RBP20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 P2RY12Q9H244 342 aa20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 PRORYQ9H606 182 aa20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 MARCH4Q9P2E8 410 aaPredicted RBP20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 VPS9D1Q9Y2B5 631 aa20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.36■□□□□ 0.85
TRAPPC9-215ENST00000524162 CACNA1GO43497 2377 aa20.35■□□□□ 0.85
TRAPPC9-215ENST00000524162 AVILO75366 819 aa20.35■□□□□ 0.85
TRAPPC9-215ENST00000524162 VAPBO95292 243 aa20.35■□□□□ 0.85
TRAPPC9-215ENST00000524162 ITPKBP27987 946 aa20.35■□□□□ 0.85
TRAPPC9-215ENST00000524162 PDHA2P29803 388 aa20.35■□□□□ 0.85
TRAPPC9-215ENST00000524162 GFERP55789 205 aa20.35■□□□□ 0.85
TRAPPC9-215ENST00000524162 TMPRSS3P57727 454 aa20.35■□□□□ 0.85
TRAPPC9-215ENST00000524162 CLN3Q13286 438 aa20.35■□□□□ 0.85
TRAPPC9-215ENST00000524162 COL28A1Q2UY09 1125 aa20.35■□□□□ 0.85
TRAPPC9-215ENST00000524162 CEACAM20Q6UY09 585 aa20.35■□□□□ 0.85
TRAPPC9-215ENST00000524162 OOSP2Q86WS3 158 aa20.35■□□□□ 0.85
TRAPPC9-215ENST00000524162 TGM7Q96PF1 710 aa20.35■□□□□ 0.85
TRAPPC9-215ENST00000524162 PANX3Q96QZ0 392 aa20.35■□□□□ 0.85
TRAPPC9-215ENST00000524162 OCIAD1Q9NX40 245 aa20.35■□□□□ 0.85
TRAPPC9-215ENST00000524162 SLC39A1Q9NY26 324 aa20.35■□□□□ 0.85
TRAPPC9-215ENST00000524162 GNPTGQ9UJJ9 305 aa20.35■□□□□ 0.85
TRAPPC9-215ENST00000524162 LHX6Q9UPM6 363 aa20.35■□□□□ 0.85
TRAPPC9-215ENST00000524162 CFAP20Q9Y6A4 193 aaKnown RBP20.35■□□□□ 0.85
TRAPPC9-215ENST00000524162 SEC16AO15027 2179 aa20.34■□□□□ 0.85
TRAPPC9-215ENST00000524162 TLCD2A6NGC4 264 aa20.34■□□□□ 0.85
TRAPPC9-215ENST00000524162 EFCAB7A8K855 629 aa20.34■□□□□ 0.85
TRAPPC9-215ENST00000524162 H3BMM5 538 aa20.34■□□□□ 0.85
TRAPPC9-215ENST00000524162 STMND1H3BQB6 276 aa20.34■□□□□ 0.85
TRAPPC9-215ENST00000524162 DNALI1O14645 258 aaPredicted RBP20.34■□□□□ 0.85
TRAPPC9-215ENST00000524162 KLK10O43240 276 aa20.34■□□□□ 0.85
TRAPPC9-215ENST00000524162 GPC4O75487 556 aa20.34■□□□□ 0.85
TRAPPC9-215ENST00000524162 USP1O94782 785 aa20.34■□□□□ 0.85
TRAPPC9-215ENST00000524162 IVDP26440 423 aa20.34■□□□□ 0.85
TRAPPC9-215ENST00000524162 KRT33BQ14525 404 aa20.34■□□□□ 0.85
TRAPPC9-215ENST00000524162 IL11RAQ14626 422 aa20.34■□□□□ 0.85
TRAPPC9-215ENST00000524162 ANKRD20A4Q4UJ75 823 aa20.34■□□□□ 0.85
TRAPPC9-215ENST00000524162 DNAJC21Q5F1R6 531 aaKnown RBP20.34■□□□□ 0.85
TRAPPC9-215ENST00000524162 MICALCLQ6ZW33 695 aa20.34■□□□□ 0.85
TRAPPC9-215ENST00000524162 BPHLQ86WA6 291 aaPredicted RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms