RNA–Protein interactions for RNA: ENST00000523514.1

FAM49B-227, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-227ENST00000523514 FAM96AQ9H5X1 160 aa7.59□□□□□ -1.19
FAM49B-227ENST00000523514 PRDM8Q9NQV8 689 aa7.59□□□□□ -1.19
FAM49B-227ENST00000523514 KCNK4Q9NYG8 393 aa7.59□□□□□ -1.19
FAM49B-227ENST00000523514 CPNE7Q9UBL6 633 aa7.59□□□□□ -1.19
FAM49B-227ENST00000523514 DKK4Q9UBT3 224 aa7.59□□□□□ -1.19
FAM49B-227ENST00000523514 SLC23A2Q9UGH3 650 aa7.59□□□□□ -1.19
FAM49B-227ENST00000523514 SLC2A6Q9UGQ3 507 aa7.59□□□□□ -1.19
FAM49B-227ENST00000523514 ANKRD11Q6UB99 2663 aaPredicted RBP7.59□□□□□ -1.19
FAM49B-227ENST00000523514 EPG5Q9HCE0 2579 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 IGHV1OR21-1A0A087WYE8 117 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 CCDC187A0A096LP49 1063 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 A0A1W2PQM1 296 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 FAM149AA5PLN7 773 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 OR51F1A6NGY5 319 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 GOLGA8MH3BSY2 632 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 LIN7AO14910 233 aaPredicted RBP7.58□□□□□ -1.2
FAM49B-227ENST00000523514 PPM1DO15297 605 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 CD3EAPO15446 510 aaKnown RBP7.58□□□□□ -1.2
FAM49B-227ENST00000523514 TTI1O43156 1089 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 USP1O94782 785 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 EML2O95834 649 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 POLBP06746 335 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 PROS1P07225 676 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 OGNP20774 298 aaKnown RBP7.58□□□□□ -1.2
FAM49B-227ENST00000523514 RPL10P27635 214 aaKnown RBP7.58□□□□□ -1.2
FAM49B-227ENST00000523514 NDUFS1P28331 727 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 NMBRP28336 390 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 ALDH4A1P30038 563 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 PBLDP30039 288 aaPredicted RBP7.58□□□□□ -1.2
FAM49B-227ENST00000523514 CCKBRP32239 447 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 MAGEA3P43357 314 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 PPM1FP49593 454 aaPredicted RBP7.58□□□□□ -1.2
FAM49B-227ENST00000523514 CDKN1CP49918 316 aaPredicted RBP7.58□□□□□ -1.2
FAM49B-227ENST00000523514 TERF1P54274 439 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 CRADDP78560 199 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 PLOD1Q02809 727 aaPredicted RBP7.58□□□□□ -1.2
FAM49B-227ENST00000523514 SQSTM1Q13501 440 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 NFE2L1Q14494 772 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 RTP5Q14D33 572 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 SEPT7Q16181 437 aaKnown RBP7.58□□□□□ -1.2
FAM49B-227ENST00000523514 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.58□□□□□ -1.2
FAM49B-227ENST00000523514 SDCCAG8Q86SQ7 713 aaPredicted RBP7.58□□□□□ -1.2
FAM49B-227ENST00000523514 PIM3Q86V86 326 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 LRRC6Q86X45 466 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 SFTPA2Q8IWL1 248 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 LSMEM2Q8N112 164 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 PDIK1LQ8N165 341 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 OTUD6BQ8N6M0 293 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 Q8N9G6 341 aaPredicted RBP7.58□□□□□ -1.2
FAM49B-227ENST00000523514 BBOF1Q8ND07 529 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 SPATA4Q8NEY3 305 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 WDR36Q8NI36 951 aaKnown RBP7.58□□□□□ -1.2
FAM49B-227ENST00000523514 ZFPM2Q8WW38 1151 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 ALKBH8Q96BT7 664 aaKnown RBP7.58□□□□□ -1.2
FAM49B-227ENST00000523514 SNF8Q96H20 258 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 C16orf45Q96MC5 204 aaPredicted RBP7.58□□□□□ -1.2
FAM49B-227ENST00000523514 TCF12Q99081 682 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 KRT12Q99456 494 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 TGIF2Q9GZN2 237 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 CCDC86Q9H6F5 360 aaKnown RBP7.58□□□□□ -1.2
FAM49B-227ENST00000523514 COG4Q9H9E3 785 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 AKAP7Q9P0M2 348 aaPredicted RBP7.58□□□□□ -1.2
FAM49B-227ENST00000523514 HEBP2Q9Y5Z4 205 aa7.58□□□□□ -1.2
FAM49B-227ENST00000523514 GPC6Q9Y625 555 aaPredicted RBP7.58□□□□□ -1.2
FAM49B-227ENST00000523514 MAP1BP46821 2468 aaKnown RBP7.58□□□□□ -1.2
FAM49B-227ENST00000523514 TRBV23OR9-2A0A075B6M9 112 aa7.57□□□□□ -1.2
FAM49B-227ENST00000523514 TRABD2BA6NFA1 517 aa7.57□□□□□ -1.2
FAM49B-227ENST00000523514 EFCAB8A8MWE9 144 aa7.57□□□□□ -1.2
FAM49B-227ENST00000523514 H3BMM5 538 aa7.57□□□□□ -1.2
FAM49B-227ENST00000523514 IFRD1O00458 451 aaPredicted RBP7.57□□□□□ -1.2
FAM49B-227ENST00000523514 PRMT5O14744 637 aaPredicted RBP7.57□□□□□ -1.2
FAM49B-227ENST00000523514 HGSO14964 777 aaPredicted RBP7.57□□□□□ -1.2
FAM49B-227ENST00000523514 SGTAO43765 313 aa7.57□□□□□ -1.2
FAM49B-227ENST00000523514 AVILO75366 819 aa7.57□□□□□ -1.2
FAM49B-227ENST00000523514 NDUFS3O75489 264 aa7.57□□□□□ -1.2
FAM49B-227ENST00000523514 SEC31AO94979 1220 aaKnown RBP7.57□□□□□ -1.2
FAM49B-227ENST00000523514 VAPBO95292 243 aa7.57□□□□□ -1.2
FAM49B-227ENST00000523514 TTC4O95801 387 aa7.57□□□□□ -1.2
FAM49B-227ENST00000523514 PRSS56P0CW18 603 aa7.57□□□□□ -1.2
FAM49B-227ENST00000523514 MTHFD1P11586 935 aaKnown RBP7.57□□□□□ -1.2
FAM49B-227ENST00000523514 BRAFP15056 766 aa7.57□□□□□ -1.2
FAM49B-227ENST00000523514 PGAM1P18669 254 aa7.57□□□□□ -1.2
FAM49B-227ENST00000523514 RPS3P23396 243 aaKnown RBP eCLIP7.57□□□□□ -1.2
FAM49B-227ENST00000523514 CD151P48509 253 aa7.57□□□□□ -1.2
FAM49B-227ENST00000523514 PDX1P52945 283 aa7.57□□□□□ -1.2
FAM49B-227ENST00000523514 DRG2P55039 364 aaKnown RBP7.57□□□□□ -1.2
FAM49B-227ENST00000523514 INHBCP55103 352 aa7.57□□□□□ -1.2
FAM49B-227ENST00000523514 CLDN6P56747 220 aa7.57□□□□□ -1.2
FAM49B-227ENST00000523514 OR1D5P58170 312 aa7.57□□□□□ -1.2
FAM49B-227ENST00000523514 CALCOCO2Q13137 446 aa7.57□□□□□ -1.2
FAM49B-227ENST00000523514 TRA2AQ13595 282 aaKnown RBP eCLIP7.57□□□□□ -1.2
FAM49B-227ENST00000523514 THOC5Q13769 683 aaKnown RBP7.57□□□□□ -1.2
FAM49B-227ENST00000523514 TUBB2AQ13885 445 aa7.57□□□□□ -1.2
FAM49B-227ENST00000523514 TMED2Q15363 201 aa7.57□□□□□ -1.2
FAM49B-227ENST00000523514 RPE65Q16518 533 aa7.57□□□□□ -1.2
FAM49B-227ENST00000523514 WHAMMP3Q1A5X7 153 aa7.57□□□□□ -1.2
FAM49B-227ENST00000523514 TYSND1Q2T9J0 566 aa7.57□□□□□ -1.2
FAM49B-227ENST00000523514 AMZ1Q400G9 498 aa7.57□□□□□ -1.2
FAM49B-227ENST00000523514 SYTL3Q4VX76 610 aa7.57□□□□□ -1.2
FAM49B-227ENST00000523514 KLHL35Q6PF15 583 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms