RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 LRRTM4Q86VH4 590 aa12.15□□□□□ -0.46
PABPC1-219ENST00000522387 SFTPA2Q8IWL1 248 aa12.15□□□□□ -0.46
PABPC1-219ENST00000522387 RIBC1Q8N443 379 aaPredicted RBP12.15□□□□□ -0.46
PABPC1-219ENST00000522387 FAM45AQ8TCE6 357 aa12.15□□□□□ -0.46
PABPC1-219ENST00000522387 CD200R1Q8TD46 325 aa12.15□□□□□ -0.46
PABPC1-219ENST00000522387 SLC17A7Q9P2U7 560 aa12.15□□□□□ -0.46
PABPC1-219ENST00000522387 TRMT6Q9UJA5 497 aaKnown RBP12.15□□□□□ -0.46
PABPC1-219ENST00000522387 A0A1W2PR77 199 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 TYROBPO43914 113 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 LILRB5O75023 590 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 VPS26AO75436 327 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 PRLHRP49683 370 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 SYTL3Q4VX76 610 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 ACSBG2Q5FVE4 666 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 LVRNQ6Q4G3 990 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 MACC1Q6ZN28 852 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 CDHR3Q6ZTQ4 885 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 PIWIL4Q7Z3Z4 852 aaKnown RBP12.14□□□□□ -0.47
PABPC1-219ENST00000522387 KIRREL3Q8IZU9 778 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 MFSD2AQ8NA29 543 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 DTX3LQ8TDB6 740 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 TCP10LQ8TDR4 215 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 KCTD4Q8WVF5 259 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 KCNJ9Q92806 393 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 NELL1Q92832 810 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 GRAMD1AQ96CP6 724 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 ARRDC1-AS1Q9H2J1 176 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 PILRBQ9UKJ0 227 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 SLC17A4Q9Y2C5 497 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 ANKRD6Q9Y2G4 727 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 PCDHB1Q9Y5F3 818 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 PCDHGA2Q9Y5H1 932 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 SNX11Q9Y5W9 270 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 ACTL7BQ9Y614 415 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 VEGFDO43915 354 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 GNSP15586 552 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 JUNDP17535 347 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 FDXRP22570 491 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 HK3P52790 923 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 ADARP55265 1226 aaKnown RBP12.14□□□□□ -0.47
PABPC1-219ENST00000522387 YPEL5P62699 121 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 POU4F1Q01851 419 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 TCF15Q12870 199 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 EIF2B5Q13144 721 aaKnown RBP12.14□□□□□ -0.47
PABPC1-219ENST00000522387 KIF19Q2TAC6 998 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 ZNF528Q3MIS6 628 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 PYCR3Q53H96 274 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 C16orf46Q6P387 395 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 AMZ2Q86W34 360 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 NXNL1Q96CM4 212 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 CCM2Q9BSQ5 444 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 LATS2Q9NRM7 1088 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 SPATS2LQ9NUQ6 558 aaKnown RBP12.14□□□□□ -0.47
PABPC1-219ENST00000522387 FETUBQ9UGM5 382 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 TLK1Q9UKI8 766 aa12.14□□□□□ -0.47
PABPC1-219ENST00000522387 ZNF37AP17032 561 aaPredicted RBP12.13□□□□□ -0.47
PABPC1-219ENST00000522387 SERPINB8P50452 374 aa12.13□□□□□ -0.47
PABPC1-219ENST00000522387 CTBSQ01459 385 aa12.13□□□□□ -0.47
PABPC1-219ENST00000522387 DLG1Q12959 904 aa12.13□□□□□ -0.47
PABPC1-219ENST00000522387 ABRQ12979 859 aa12.13□□□□□ -0.47
PABPC1-219ENST00000522387 TRIM61Q5EBN2 209 aa12.13□□□□□ -0.47
PABPC1-219ENST00000522387 FBXO48Q5FWF7 155 aa12.13□□□□□ -0.47
PABPC1-219ENST00000522387 PARGQ86W56 976 aa12.13□□□□□ -0.47
PABPC1-219ENST00000522387 ZBTB2Q8N680 514 aa12.13□□□□□ -0.47
PABPC1-219ENST00000522387 PRSS33Q8NF86 280 aa12.13□□□□□ -0.47
PABPC1-219ENST00000522387 DENND1AQ8TEH3 1009 aa12.13□□□□□ -0.47
PABPC1-219ENST00000522387 EXT2Q93063 718 aa12.13□□□□□ -0.47
PABPC1-219ENST00000522387 LINGO1Q96FE5 620 aa12.13□□□□□ -0.47
PABPC1-219ENST00000522387 PITPNM3Q9BZ71 974 aa12.13□□□□□ -0.47
PABPC1-219ENST00000522387 PCED1AQ9H1Q7 454 aa12.13□□□□□ -0.47
PABPC1-219ENST00000522387 PRDM8Q9NQV8 689 aa12.13□□□□□ -0.47
PABPC1-219ENST00000522387 UTP6Q9NYH9 597 aaKnown RBP12.13□□□□□ -0.47
PABPC1-219ENST00000522387 CPSF2Q9P2I0 782 aaKnown RBP12.13□□□□□ -0.47
PABPC1-219ENST00000522387 TMEM131Q92545 1883 aa12.13□□□□□ -0.47
PABPC1-219ENST00000522387 H3BMM5 538 aa12.12□□□□□ -0.47
PABPC1-219ENST00000522387 DIAPH2O60879 1101 aa12.12□□□□□ -0.47
PABPC1-219ENST00000522387 CTSEP14091 401 aa12.12□□□□□ -0.47
PABPC1-219ENST00000522387 RPS3P23396 243 aaKnown RBP eCLIP12.12□□□□□ -0.47
PABPC1-219ENST00000522387 ACTR1BP42025 376 aa12.12□□□□□ -0.47
PABPC1-219ENST00000522387 SKIV2L2P42285 1042 aaKnown RBP12.12□□□□□ -0.47
PABPC1-219ENST00000522387 ACTR1AP61163 376 aa12.12□□□□□ -0.47
PABPC1-219ENST00000522387 PTK2BQ14289 1009 aa12.12□□□□□ -0.47
PABPC1-219ENST00000522387 GALNT7Q86SF2 657 aa12.12□□□□□ -0.47
PABPC1-219ENST00000522387 SYT12Q8IV01 421 aa12.12□□□□□ -0.47
PABPC1-219ENST00000522387 TMEM159Q96B96 161 aa12.12□□□□□ -0.47
PABPC1-219ENST00000522387 PANX3Q96QZ0 392 aa12.12□□□□□ -0.47
PABPC1-219ENST00000522387 NRTNQ99748 197 aa12.12□□□□□ -0.47
PABPC1-219ENST00000522387 ACSS2Q9NR19 701 aa12.12□□□□□ -0.47
PABPC1-219ENST00000522387 APOBEC3BQ9UH17 382 aaKnown RBP12.12□□□□□ -0.47
PABPC1-219ENST00000522387 GMEB2Q9UKD1 530 aa12.12□□□□□ -0.47
PABPC1-219ENST00000522387 IKZF3Q9UKT9 509 aa12.12□□□□□ -0.47
PABPC1-219ENST00000522387 WDR37Q9Y2I8 494 aa12.12□□□□□ -0.47
PABPC1-219ENST00000522387 ACOT9Q9Y305 439 aa12.12□□□□□ -0.47
PABPC1-219ENST00000522387 PRAMEF33A0A0G2JMD5 474 aa12.12□□□□□ -0.47
PABPC1-219ENST00000522387 NCF1BA6NI72 391 aaPredicted RBP12.12□□□□□ -0.47
PABPC1-219ENST00000522387 OR52A4PA6NMU1 304 aa12.12□□□□□ -0.47
PABPC1-219ENST00000522387 NCF1CA8MVU1 366 aaPredicted RBP12.12□□□□□ -0.47
PABPC1-219ENST00000522387 UNC5CO95185 931 aa12.12□□□□□ -0.47
PABPC1-219ENST00000522387 EML2O95834 649 aa12.12□□□□□ -0.47
PABPC1-219ENST00000522387 FTH1P02794 183 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 544.3 ms