RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 DHX9Q08211 1270 aaKnown RBP10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 THOC5Q13769 683 aaKnown RBP10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 BRD3Q15059 726 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 ST3GAL2Q16842 350 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 DNAJC21Q5F1R6 531 aaKnown RBP10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 DUPD1Q68J44 220 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 PTRHD1Q6GMV3 140 aaKnown RBP10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 IGDCC3Q8IVU1 814 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 LMNTD2Q8IXW0 634 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 BBOF1Q8ND07 529 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 RCBTB1Q8NDN9 531 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 ASZ1Q8WWH4 475 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 ZCCHC14Q8WYQ9 949 aaKnown RBP10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 ZNF669Q96BR6 464 aaPredicted RBP10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 LRRC39Q96DD0 335 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 CCDC74BQ96LY2 380 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 RMDN2Q96LZ7 410 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 ZNF578Q96N58 590 aaPredicted RBP10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 PWWP2AQ96N64 755 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 FERD3LQ96RJ6 166 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 TSSK1BQ9BXA7 367 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 MVB12BQ9H7P6 319 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 ASCL3Q9NQ33 180 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 LATS2Q9NRM7 1088 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 IL1RAPL1Q9NZN1 696 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 SLC24A2Q9UI40 661 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 CDYLQ9Y232 598 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 SNX24Q9Y343 169 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 PIKFYVEQ9Y2I7 2098 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 FREM2Q5SZK8 3169 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 DMXL2Q8TDJ6 3036 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 PMS2P1A4D2B8 440 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 CDRT15L2A8MXV6 281 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 KIF2AO00139 706 aaPredicted RBP10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 NDC80O14777 642 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 KPNA5O15131 536 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 TOX3O15405 576 aaPredicted RBP10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 CAPN5O15484 640 aaPredicted RBP10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 RAD51CO43502 376 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 BANF1O75531 89 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 TNFSF15O95150 251 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 ITGA2BP08514 1039 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 FGF3P11487 239 aaPredicted RBP10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 PGAM1P18669 254 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 FMO4P31512 558 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 MAPK9P45984 424 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 PPM1FP49593 454 aaPredicted RBP10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 ARL4CP56559 192 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 MRPS25P82663 173 aaKnown RBP10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 C2orf54Q08AI8 447 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 HSPA14Q0VDF9 509 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 CTBP1Q13363 440 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 TUBB2AQ13885 445 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 KRT33BQ14525 404 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 C16orf72Q14CZ0 275 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 TBC1D25Q3MII6 688 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 BBS9Q3SYG4 887 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 ZNF789Q5FWF6 425 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 RNF187Q5TA31 235 aaPredicted RBP10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 KLHL35Q6PF15 583 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 FOXR1Q6PIV2 292 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 NAPRTQ6XQN6 538 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 PDZD3Q86UT5 571 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 KRT222Q8N1A0 295 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 AGBL5Q8NDL9 886 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 ACVR1CQ8NER5 493 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 CALML6Q8TD86 181 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 LPGAT1Q92604 370 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 C9orf72Q96LT7 481 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 PANX3Q96QZ0 392 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 TUBB2BQ9BVA1 445 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 B3GNT4Q9C0J1 378 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 TFB2MQ9H5Q4 396 aaKnown RBP10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 C20orf96Q9NUD7 363 aaPredicted RBP10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 INTS10Q9NVR2 710 aaKnown RBP10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 AKAP7Q9P0M2 348 aaPredicted RBP10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 WHRNQ9P202 907 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 GNPTGQ9UJJ9 305 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 VPS9D1Q9Y2B5 631 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 CRYL1Q9Y2S2 319 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 LOXL2Q9Y4K0 774 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 TEX264Q9Y6I9 313 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 KIF26BQ2KJY2 2108 aa10.87□□□□□ -0.67
SCARNA20-201ENST00000516768 UBA6A0AVT1 1052 aaPredicted RBP10.86□□□□□ -0.67
SCARNA20-201ENST00000516768 SRRM3A6NNA2 597 aaPredicted RBP10.86□□□□□ -0.67
SCARNA20-201ENST00000516768 A8MU76 341 aa10.86□□□□□ -0.67
SCARNA20-201ENST00000516768 E7ESA3 106 aa10.86□□□□□ -0.67
SCARNA20-201ENST00000516768 H3BMM5 538 aa10.86□□□□□ -0.67
SCARNA20-201ENST00000516768 NVLO15381 856 aaKnown RBP10.86□□□□□ -0.67
SCARNA20-201ENST00000516768 TLX3O43711 291 aaPredicted RBP10.86□□□□□ -0.67
SCARNA20-201ENST00000516768 HAUS5O94927 633 aa10.86□□□□□ -0.67
SCARNA20-201ENST00000516768 ESR1P03372 595 aa10.86□□□□□ -0.67
SCARNA20-201ENST00000516768 APOA4P06727 396 aa10.86□□□□□ -0.67
SCARNA20-201ENST00000516768 JMJD7P0C870 316 aa10.86□□□□□ -0.67
SCARNA20-201ENST00000516768 CCL4P13236 92 aa10.86□□□□□ -0.67
SCARNA20-201ENST00000516768 HGFP14210 728 aa10.86□□□□□ -0.67
SCARNA20-201ENST00000516768 ITGB6P18564 788 aa10.86□□□□□ -0.67
SCARNA20-201ENST00000516768 ITIH1P19827 911 aa10.86□□□□□ -0.67
SCARNA20-201ENST00000516768 CSTF2P33240 577 aaKnown RBP eCLIP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms