RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 B3GAT1Q9P2W7 334 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 IL36RNQ9UBH0 155 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ZNF107Q9UII5 783 aaPredicted RBP0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SARDHQ9UL12 918 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PNMA2Q9UL42 364 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 TTC7AQ9ULT0 858 aaPredicted RBP0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PLAGL1Q9UM63 463 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PCDHGB4Q9UN71 923 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 LRCH1Q9Y2L9 728 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 MMP24Q9Y5R2 645 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 CYP46A1Q9Y6A2 500 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 AGRNO00468 2067 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 BRWD3Q6RI45 1802 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 KDM3AQ9Y4C1 1321 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 FSIP2Q5CZC0 6907 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 IGKV6D-41A0A0C4DH26 115 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 A0A0J9YWU9 116 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 HYKKA2RU49 373 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 GAGE12JA6NER3 117 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 TMEM221A6NGB7 291 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 URADA6NGE7 173 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SERINC4A6NH21 518 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 EFCAB8A8MWE9 144 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ANHXE9PGG2 379 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 H0YIG0 161 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SH2B2O14492 632 aaPredicted RBP0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 MAGEB2O15479 319 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 HOXC11O43248 304 aaPredicted RBP0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SPINT2O43291 252 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SYNGR3O43761 229 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 IDH3BO43837 385 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 GALR3O60755 368 aaPredicted RBP0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PAGE4O60829 102 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 CAND2O75155 1236 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 TPPPO94811 219 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PIGNO95427 931 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 MYL1P05976 194 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 LCKP06239 509 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 HSPA8P11142 646 aaKnown RBP0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 COX7A2P14406 83 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PAX1P15863 534 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 LHCGRP22888 699 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 FASP25445 335 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 GJB2P29033 226 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ACTN2P35609 894 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 STAT1P42224 750 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 MSH2P43246 934 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 GPR12P47775 334 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 KCNJ1P48048 391 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 CTCFP49711 727 aaPredicted RBP0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PEX5P50542 639 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 CLCNKAP51800 687 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PPP5CP53041 499 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 CTSCP53634 463 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 UBASH3AP57075 661 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 KRTAP10-10P60014 251 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SEC61BP60468 96 aaKnown RBP0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 RPS8P62241 208 aaKnown RBP0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PLIN5Q00G26 463 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PPARDQ03181 441 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 NEXNQ0ZGT2 675 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 GRIK2Q13002 908 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 LCP2Q13094 533 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PPIGQ13427 754 aaKnown RBP eCLIP0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 TRA2AQ13595 282 aaKnown RBP eCLIP0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 KCNC3Q14003 757 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 VEZF1Q14119 521 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SLC1A5Q15758 541 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 CA9Q16790 459 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ASTE1Q2TB18 679 aaPredicted RBP0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 GLIPR1L2Q4G1C9 344 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 CTXN3Q4LDR2 81 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SLC22A6Q4U2R8 563 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 C4orf46Q504U0 113 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 FAM98BQ52LJ0 330 aaKnown RBP0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 TMEM35AQ53FP2 167 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 GLE1Q53GS7 698 aaKnown RBP0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 TAF7LQ5H9L4 462 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PDSS1Q5T2R2 415 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 TMEM63BQ5T3F8 832 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 RNASEH2BQ5TBB1 312 aaKnown RBP0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SNX30Q5VWJ9 437 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ARL6IP4Q66PJ3 421 aaKnown RBP0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 TMEM211Q6ICI0 200 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 JADE1Q6IE81 842 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ZCCHC12Q6PEW1 402 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SLC25A47Q6Q0C1 308 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 CCNI2Q6ZMN8 369 aaPredicted RBP0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 IKBIPQ70UQ0 350 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 LINGO2Q7L985 606 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 NUP54Q7Z3B4 507 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 C11orf96Q7Z7L8 435 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 TBC1D1Q86TI0 1168 aaPredicted RBP0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 CCDC190Q86UF4 302 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 LRRTM4Q86VH4 590 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 EXOC3L1Q86VI1 746 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 KCNMB4Q86W47 210 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 KRTAP13-1Q8IUC0 172 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PLD3Q8IV08 490 aa0.22□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SCYL3Q8IZE3 742 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms