RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 DCAKDQ8WVC6 231 aa11.08□□□□□ -0.64
HTT-213ENST00000513806 SLC44A1Q8WWI5 657 aa11.08□□□□□ -0.64
HTT-213ENST00000513806 CAVIN3Q969G5 261 aa11.08□□□□□ -0.64
HTT-213ENST00000513806 PANX3Q96QZ0 392 aa11.08□□□□□ -0.64
HTT-213ENST00000513806 IMP3Q9NV31 184 aaKnown RBP11.08□□□□□ -0.64
HTT-213ENST00000513806 TXNDC16Q9P2K2 825 aa11.08□□□□□ -0.64
HTT-213ENST00000513806 FTSJ1Q9UET6 329 aa11.08□□□□□ -0.64
HTT-213ENST00000513806 IKZF3Q9UKT9 509 aa11.08□□□□□ -0.64
HTT-213ENST00000513806 PLAGL1Q9UM63 463 aa11.08□□□□□ -0.64
HTT-213ENST00000513806 VPS9D1Q9Y2B5 631 aa11.08□□□□□ -0.64
HTT-213ENST00000513806 VWA7Q9Y334 891 aa11.08□□□□□ -0.64
HTT-213ENST00000513806 KIF26BQ2KJY2 2108 aa11.08□□□□□ -0.64
HTT-213ENST00000513806 PCM1Q15154 2024 aa11.08□□□□□ -0.64
HTT-213ENST00000513806 CNOT1A5YKK6 2376 aaKnown RBP11.08□□□□□ -0.64
HTT-213ENST00000513806 PTPRBP23467 1997 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 C17orf113A0A1B0GUU1 675 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 DCDC2BA2VCK2 349 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 QSOX1O00391 747 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 TPP1O14773 563 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 LIN7AO14910 233 aaPredicted RBP11.07□□□□□ -0.64
HTT-213ENST00000513806 CTIFO43310 598 aaKnown RBP11.07□□□□□ -0.64
HTT-213ENST00000513806 VPS26AO75436 327 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 ITGA2BP08514 1039 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 SLC35G4P0C7Q5 338 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 MSH2P43246 934 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 LIMK1P53667 647 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 LIMK2P53671 638 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 DAB2P98082 770 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 PRKG2Q13237 762 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 SLC14A1Q13336 389 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 PDAP1Q13442 181 aaKnown RBP11.07□□□□□ -0.64
HTT-213ENST00000513806 USP10Q14694 798 aaKnown RBP11.07□□□□□ -0.64
HTT-213ENST00000513806 NR0B2Q15466 257 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 KLHL38Q2WGJ6 581 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 CCSMST1Q4G0I0 132 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 C14orf28Q4W4Y0 310 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 GRTP1Q5TC63 336 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 CAPRIN2Q6IMN6 1127 aaKnown RBP11.07□□□□□ -0.64
HTT-213ENST00000513806 FAM45BPQ6NSW5 357 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 ZCCHC8Q6NZY4 707 aaKnown RBP11.07□□□□□ -0.64
HTT-213ENST00000513806 ZNF449Q6P9G9 518 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 EMBQ6PCB8 327 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 OGFOD3Q6PK18 319 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 ABRAXAS1Q6UWZ7 409 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 EFL1Q7Z2Z2 1120 aaKnown RBP11.07□□□□□ -0.64
HTT-213ENST00000513806 ARL10Q8N8L6 244 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 Q8N9G6 341 aaPredicted RBP11.07□□□□□ -0.64
HTT-213ENST00000513806 OR5AR1Q8NGP9 310 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 GABPB2Q8TAK5 448 aaPredicted RBP11.07□□□□□ -0.64
HTT-213ENST00000513806 BAHD1Q8TBE0 780 aaPredicted RBP11.07□□□□□ -0.64
HTT-213ENST00000513806 FAM45AQ8TCE6 357 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 MAPK15Q8TD08 544 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 EEF1AKMT1Q8WVE0 214 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 SKA2Q8WVK7 121 aaPredicted RBP11.07□□□□□ -0.64
HTT-213ENST00000513806 SCG3Q8WXD2 468 aaKnown RBP11.07□□□□□ -0.64
HTT-213ENST00000513806 KCNJ9Q92806 393 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 CCDC74AQ96AQ1 378 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 TMEM159Q96B96 161 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 GPR22Q99680 433 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 TSSK1BQ9BXA7 367 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 TBC1D10AQ9BXI6 508 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 NSMCE4AQ9NXX6 385 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 TBK1Q9UHD2 729 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 TRMT6Q9UJA5 497 aaKnown RBP11.07□□□□□ -0.64
HTT-213ENST00000513806 CDV3Q9UKY7 258 aaKnown RBP11.07□□□□□ -0.64
HTT-213ENST00000513806 PADI4Q9UM07 663 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 DHRS7Q9Y394 339 aa11.07□□□□□ -0.64
HTT-213ENST00000513806 H3BMM5 538 aa11.06□□□□□ -0.64
HTT-213ENST00000513806 SLC30A4O14863 429 aa11.06□□□□□ -0.64
HTT-213ENST00000513806 TM4SF5O14894 197 aa11.06□□□□□ -0.64
HTT-213ENST00000513806 FOXD2O60548 495 aaPredicted RBP11.06□□□□□ -0.64
HTT-213ENST00000513806 TOP3BO95985 862 aaKnown RBP11.06□□□□□ -0.64
HTT-213ENST00000513806 APOA4P06727 396 aa11.06□□□□□ -0.64
HTT-213ENST00000513806 INHBAP08476 426 aa11.06□□□□□ -0.64
HTT-213ENST00000513806 MTHFD1P11586 935 aaKnown RBP11.06□□□□□ -0.64
HTT-213ENST00000513806 ACADLP28330 430 aa11.06□□□□□ -0.64
HTT-213ENST00000513806 SPRP35270 261 aaPredicted RBP11.06□□□□□ -0.64
HTT-213ENST00000513806 MAPK9P45984 424 aa11.06□□□□□ -0.64
HTT-213ENST00000513806 OR1D5P58170 312 aa11.06□□□□□ -0.64
HTT-213ENST00000513806 UBE2IP63279 158 aaKnown RBP11.06□□□□□ -0.64
HTT-213ENST00000513806 IRF9Q00978 393 aa11.06□□□□□ -0.64
HTT-213ENST00000513806 NAB1Q13506 487 aa11.06□□□□□ -0.64
HTT-213ENST00000513806 GBX1Q14549 363 aa11.06□□□□□ -0.64
HTT-213ENST00000513806 TMED2Q15363 201 aa11.06□□□□□ -0.64
HTT-213ENST00000513806 PPM1JQ5JR12 505 aa11.06□□□□□ -0.64
HTT-213ENST00000513806 PLEKHS1Q5SXH7 462 aa11.06□□□□□ -0.64
HTT-213ENST00000513806 AGAP9Q5VTM2 703 aa11.06□□□□□ -0.64
HTT-213ENST00000513806 NKAIN2Q5VXU1 208 aa11.06□□□□□ -0.64
HTT-213ENST00000513806 LVRNQ6Q4G3 990 aa11.06□□□□□ -0.64
HTT-213ENST00000513806 PDZD3Q86UT5 571 aa11.06□□□□□ -0.64
HTT-213ENST00000513806 C17orf82Q86X59 251 aaPredicted RBP11.06□□□□□ -0.64
HTT-213ENST00000513806 SLC22A15Q8IZD6 547 aa11.06□□□□□ -0.64
HTT-213ENST00000513806 CYP4X1Q8N118 509 aa11.06□□□□□ -0.64
HTT-213ENST00000513806 SFRP1Q8N474 314 aa11.06□□□□□ -0.64
HTT-213ENST00000513806 IFI44Q8TCB0 444 aa11.06□□□□□ -0.64
HTT-213ENST00000513806 ANKRD49Q8WVL7 239 aa11.06□□□□□ -0.64
HTT-213ENST00000513806 ASZ1Q8WWH4 475 aa11.06□□□□□ -0.64
HTT-213ENST00000513806 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.06□□□□□ -0.64
HTT-213ENST00000513806 INPP5DQ92835 1189 aa11.06□□□□□ -0.64
HTT-213ENST00000513806 CXorf40BQ96DE9 158 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms