RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 GTF2H2Q13888 395 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 CYLC2Q14093 348 aaPredicted RBP8.21□□□□□ -1.1
RNF4-220ENST00000513578 ZRSR2Q15696 482 aaKnown RBP8.21□□□□□ -1.1
RNF4-220ENST00000513578 GSTA3Q16772 222 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 PHKG1Q16816 387 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 KHDC1Q4VXA5 237 aaKnown RBP8.21□□□□□ -1.1
RNF4-220ENST00000513578 LRRC73Q5JTD7 316 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 PIP5KL1Q5T9C9 394 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 EGFLAMQ63HQ2 1017 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 NXNQ6DKJ4 435 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 CLEC6AQ6EIG7 209 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 GTF2H2CQ6P1K8 395 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 HACD2Q6Y1H2 254 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 LRRC70Q7Z2Q7 622 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 GOLGA7Q7Z5G4 137 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 NET1Q7Z628 596 aaPredicted RBP8.21□□□□□ -1.1
RNF4-220ENST00000513578 RASGEF1AQ8N9B8 481 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 SMRP1Q8NCR6 262 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 DLG3Q92796 817 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 NUS1Q96E22 293 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 CATSPER2Q96P56 530 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 GABRG3Q99928 467 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 TMEM79Q9BSE2 394 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 CCM2Q9BSQ5 444 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 TUBB1Q9H4B7 451 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 AKTIPQ9H8T0 292 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 TRIM39Q9HCM9 518 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 SEMA4BQ9NPR2 832 aaPredicted RBP8.21□□□□□ -1.1
RNF4-220ENST00000513578 TRPS1Q9UHF7 1281 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 EIF2B4Q9UI10 523 aaKnown RBP8.21□□□□□ -1.1
RNF4-220ENST00000513578 PRPF19Q9UMS4 504 aaKnown RBP8.21□□□□□ -1.1
RNF4-220ENST00000513578 GPR34Q9UPC5 381 aa8.21□□□□□ -1.1
RNF4-220ENST00000513578 A0A088AWK7 358 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 KLHL33A6NCF5 533 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 NCF1BA6NI72 391 aaPredicted RBP8.2□□□□□ -1.1
RNF4-220ENST00000513578 NCF1CA8MVU1 366 aaPredicted RBP8.2□□□□□ -1.1
RNF4-220ENST00000513578 NPIPB8E9PQR5 432 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 K7EQS6 105 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 LIN7AO14910 233 aaPredicted RBP8.2□□□□□ -1.1
RNF4-220ENST00000513578 PIP5K1BO14986 540 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 LZTS3O60299 673 aaPredicted RBP8.2□□□□□ -1.1
RNF4-220ENST00000513578 CCNT2O60583 730 aaKnown RBP8.2□□□□□ -1.1
RNF4-220ENST00000513578 RNASEH1O60930 286 aaKnown RBP8.2□□□□□ -1.1
RNF4-220ENST00000513578 LILRB5O75023 590 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 ATG13O75143 517 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 KATNA1O75449 491 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 PSIP1O75475 530 aaKnown RBP8.2□□□□□ -1.1
RNF4-220ENST00000513578 CRCPO75575 148 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 STK16O75716 305 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 EPHX1P07099 455 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 HIST1H2AGP0C0S8 130 aaPredicted RBP8.2□□□□□ -1.1
RNF4-220ENST00000513578 EBLN1P0CF75 366 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 NCF1P14598 390 aaPredicted RBP8.2□□□□□ -1.1
RNF4-220ENST00000513578 TSPAN8P19075 237 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 HIST1H2ADP20671 130 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 ITGAXP20702 1163 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 CYP2A7P20853 494 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 P2RY2P41231 377 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 CPA2P48052 419 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 SLC6A12P48065 614 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 RPIAP49247 311 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 METAP1P53582 386 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 ERVPABLB-1P60509 514 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 ZNF33BQ06732 778 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 TRAF3Q13114 568 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 STX5Q13190 355 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 RBBP7Q16576 425 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 TRMT5Q32P41 509 aaKnown RBP8.2□□□□□ -1.1
RNF4-220ENST00000513578 GGTA1PQ4G0N0 100 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 COQ5Q5HYK3 327 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 TMEM198Q66K66 360 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 NAIF1Q69YI7 327 aaPredicted RBP8.2□□□□□ -1.1
RNF4-220ENST00000513578 C16orf89Q6UX73 402 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 ADAMTSL4Q6UY14 1074 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 UBE2R2Q712K3 238 aaPredicted RBP8.2□□□□□ -1.1
RNF4-220ENST00000513578 GALNT13Q8IUC8 556 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 MMAAQ8IVH4 418 aaKnown RBP8.2□□□□□ -1.1
RNF4-220ENST00000513578 SFTPA1Q8IWL2 248 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 SCUBE1Q8IWY4 988 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 SLC22A15Q8IZD6 547 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 ENDOVQ8N8Q3 282 aaKnown RBP8.2□□□□□ -1.1
RNF4-220ENST00000513578 KYQ8NBH2 561 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 FBXO27Q8NI29 283 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 HMGCLL1Q8TB92 370 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 CSGALNACT1Q8TDX6 532 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 CXorf40AQ8TE69 158 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 ELMO1Q92556 727 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 COL26A1Q96A83 441 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 FBXL8Q96CD0 374 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 COX14Q96I36 57 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 HIST1H2AHQ96KK5 128 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 C3orf30Q96M34 536 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 ACOX2Q99424 681 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 HIST1H2AJQ99878 128 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 P2RY13Q9BPV8 354 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 H2AFJQ9BTM1 129 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 RPP25Q9BUL9 199 aaKnown RBP8.2□□□□□ -1.1
RNF4-220ENST00000513578 SLC29A3Q9BZD2 475 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 SLC32A1Q9H598 525 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 DENND2DQ9H6A0 471 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms