RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 NCSTNQ92542 709 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 RNF157Q96PX1 679 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 NUSAP1Q9BXS6 441 aaKnown RBP5.71□□□□□ -1.5
USP38-203ENST00000511739 SEZ6LQ9BYH1 1024 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 SEMA4AQ9H3S1 761 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 RXFP1Q9HBX9 757 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 MKKSQ9NPJ1 570 aaPredicted RBP5.71□□□□□ -1.5
USP38-203ENST00000511739 TEX13CA0A0J9YWL9 993 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 A0A1B0GVM2 712 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 CIB4A0PJX0 185 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 TCAF2A6NFQ2 919 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 BTBD19C9JJ37 291 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 GNB5O14775 395 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 ONECUT3O60422 494 aaPredicted RBP5.7□□□□□ -1.5
USP38-203ENST00000511739 ZBTB48P10074 688 aaPredicted RBP5.7□□□□□ -1.5
USP38-203ENST00000511739 FOSL2P15408 326 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 PPIDQ08752 370 aaKnown RBP5.7□□□□□ -1.5
USP38-203ENST00000511739 BNIP2Q12982 314 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 ALG10BQ5I7T1 473 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 DCST1Q5T197 706 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 FAM92BQ6ZTR7 304 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 OR6N1Q8NGY5 312 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 RASSF5Q8WWW0 418 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 STRA6Q9BX79 667 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 LRTM1Q9HBL6 345 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 ADAP2Q9NPF8 381 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 GDAP2Q9NXN4 497 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 NUP98P52948 1817 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 MYH7P12883 1935 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 PLD2O14939 933 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 TBX1O43435 398 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 SLC22A3O75751 556 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 ERBB2P04626 1255 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 HSD3B1P14060 373 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 TNFRSF8P28908 595 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 PNLIPRP1P54315 467 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 AIF1P55008 147 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 CDH4P55283 916 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 NRG1Q02297 640 aaPredicted RBP5.7□□□□□ -1.5
USP38-203ENST00000511739 MLC1Q15049 377 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 EIPR1Q53HC9 387 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 C9orf57Q5W0N0 161 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 DNM1P34Q6PK57 102 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 ZER1Q7Z7L7 766 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 DNAAF5Q86Y56 855 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 KATNAL2Q8IYT4 538 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 SPATA6LQ8N4H0 392 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 EMID1Q96A84 441 aaPredicted RBP5.7□□□□□ -1.5
USP38-203ENST00000511739 TRAPPC9Q96Q05 1148 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 ZNF670Q9BS34 389 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 PNPLA8Q9NP80 782 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 NINJ2Q9NZG7 142 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 UPB1Q9UBR1 384 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 ZNF639Q9UID6 485 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 SNX7Q9UNH6 387 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 TMEM5Q9Y2B1 443 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 UBIAD1Q9Y5Z9 338 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 COL18A1P39060 1754 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 E2F3O00716 465 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 PDPK1O15530 556 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 LDB2O43679 373 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 PAPSS2O95340 614 aaPredicted RBP5.7□□□□□ -1.5
USP38-203ENST00000511739 CLDN9O95484 217 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 MT-CYBP00156 380 aaPredicted RBP5.7□□□□□ -1.5
USP38-203ENST00000511739 C9P02748 559 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 GLI1P08151 1106 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 CYP4B1P13584 511 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 IRF2P14316 349 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 FECHP22830 423 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 PSME3P61289 254 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 CYP4F8P98187 520 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 CD47Q08722 323 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 CAPSQ13938 189 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 ZNF311Q5JNZ3 666 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 SPIN3Q5JUX0 258 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 LDLRAP1Q5SW96 308 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 SLC25A25Q6KCM7 469 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 POC5Q8NA72 575 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 CEP295NLQ96MC4 621 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 HSD17B14Q9BPX1 270 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 AIFM2Q9BRQ8 373 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 MMADHCQ9H3L0 296 aaPredicted RBP5.7□□□□□ -1.5
USP38-203ENST00000511739 PTGES2Q9H7Z7 377 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 TCF7L1Q9HCS4 588 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 MEMO1Q9Y316 297 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 ZFP37Q9Y6Q3 630 aaPredicted RBP5.7□□□□□ -1.5
USP38-203ENST00000511739 COL1A2P08123 1366 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 ATP6AP2A0A1C7CYW4 349 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 A0A1W2PQ45 241 aaPredicted RBP5.7□□□□□ -1.5
USP38-203ENST00000511739 A0A1W2PQY0 241 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 YDJCA8MPS7 323 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 E7EQ34 232 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 EPHB6O15197 1021 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 ATP6AP2O75787 350 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 PRAMEF1O95521 474 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 NDST3O95803 873 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 ACP5P13686 325 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 ALADP13716 330 aa5.7□□□□□ -1.5
USP38-203ENST00000511739 DNAJA1P31689 397 aaKnown RBP5.7□□□□□ -1.5
USP38-203ENST00000511739 SEPHS1P49903 392 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms