RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 MSANTD1Q6ZTZ1 278 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 TMEM173Q86WV6 379 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 MAML2Q8IZL2 1156 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 CCAR2Q8N163 923 aaKnown RBP3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 NUP93Q8N1F7 819 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 SIX6OS1Q8N1H7 587 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 GCSAMQ8N6F7 178 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 PCDH20Q8N6Y1 951 aaKnown RBP3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 SLC38A9Q8NBW4 561 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 TBC1D16Q8TBP0 767 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 MAGEC3Q8TD91 643 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 UTP15Q8TED0 518 aaKnown RBP3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 KCNE4Q8WWG9 221 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 ATL1Q8WXF7 558 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 DDB2Q92466 427 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 RND1Q92730 232 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 NXNL1Q96CM4 212 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 ZNF558Q96NG5 402 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 MS4A10Q96PG2 267 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 CRAMP1Q96RY5 1269 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 GFI1Q99684 422 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 ABHD6Q9BV23 337 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 MOV10L1Q9BXT6 1211 aaKnown RBP3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 EQTNQ9NQ60 294 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 TRNAU1APQ9NX07 287 aaKnown RBP3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 MCM9Q9NXL9 1143 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 LOXL2Q9Y4K0 774 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 TMEM184BQ9Y519 407 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 SNX5Q9Y5X3 404 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 LMO7Q8WWI1 1683 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 ASTN2O75129 1339 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 RGPD1P0DJD0 1748 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 POLR3AO14802 1390 aaPredicted RBP3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 LRRC37A3O60309 1634 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 IGHV4-28A0A0C4DH34 117 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 IGLV5-39A0A0G2JS06 123 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 RPS10-NUDT3A0A1W2PQS6 291 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 TRIM64A6NGJ6 449 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 TRIM64BA6NI03 449 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 OR6C76A6NM76 312 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 BECN2A8MW95 431 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 FAM90A26D6RGX4 464 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 H0YGN5 161 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 TMEM189-UBE2V1I3L0A0 370 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 ANKRD28O15084 1053 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 SSX4O60224 188 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 NDUFS7O75251 213 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 CELA2AP08217 269 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 OR52Z1P0C646 297 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 SRCP12931 536 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 PDGFRAP16234 1089 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 EEF1B2P24534 225 aaKnown RBP3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 MTHFRP42898 656 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 MMP13P45452 471 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 GAGE2BQ13066 116 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 TRAF1Q13077 416 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 UBE2V1Q13404 147 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 PTK6Q13882 451 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 MELKQ14680 651 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 NR1D2Q14995 579 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 RBMS2Q15434 407 aaKnown RBP3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 CTF1Q16619 201 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 SMN1Q16637 294 aaKnown RBP3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 VWC2Q2TAL6 325 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 AMZ1Q400G9 498 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 GAGE2EQ4V326 116 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 SLC10A5Q5PT55 438 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 FNBP1LQ5T0N5 605 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 SFMBT2Q5VUG0 894 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 C18orf63Q68DL7 685 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 GAGE2AQ6NT46 116 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 IYDQ6PHW0 289 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 FAM198BQ6UWH4 519 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 PPP1R21Q6ZMI0 780 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 ZNF534Q76KX8 674 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 DET1Q7L5Y6 550 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 IRF2BP2Q7Z5L9 587 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 GPR180Q86V85 440 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 NRROSQ86YC3 692 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 FOXRED2Q8IWF2 684 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 UNC45BQ8IWX7 931 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 PM20D2Q8IYS1 436 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 CCDC170Q8IYT3 715 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 CEP57L1Q8IYX8 460 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 WDR20Q8TBZ3 569 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 WFIKKN2Q8TEU8 576 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 SLC25A28Q96A46 364 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 RHBDF1Q96CC6 855 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 ERO1AQ96HE7 468 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 URB1-AS1Q96HZ7 61 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 NLRP4Q96MN2 994 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 DNAI2Q9GZS0 605 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 PLAC1Q9HBJ0 212 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 DDX43Q9NXZ2 648 aaKnown RBP3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 MTRRQ9UBK8 725 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 DNAJB9Q9UBS3 223 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 GAGE2DQ9UEU5 116 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 TINAGQ9UJW2 476 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 FBXL2Q9UKC9 423 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms