RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 RIBC2Q9H4K1 309 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 PSME2Q9UL46 239 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 EDDM13A0A1B0GTR0 161 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 TNFRSF10BO14763 440 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 VIPP01282 170 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 KLKB1P03952 638 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 ACTR1BP42025 376 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 ACTR1AP61163 376 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 PTCHD3Q3KNS1 767 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 ACSBG2Q5FVE4 666 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 REP15Q6BDI9 236 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 PAGE2Q7Z2X7 111 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 TAF8Q7Z7C8 310 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 STARD8Q92502 1023 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 KIAA1191Q96A73 305 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 AIF1LQ9BQI0 150 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 CARS2Q9HA77 564 aaKnown RBP13.86□□□□□ -0.19
TCOF1-207ENST00000504761 COPG1Q9Y678 874 aaKnown RBP13.86□□□□□ -0.19
TCOF1-207ENST00000504761 NUMA1Q14980 2115 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 KLF11O14901 512 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 CLCNKAP51800 687 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 PLA2G16P53816 162 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 C2orf80Q0P641 193 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 PTPRRQ15256 657 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 ATAD3BQ5T9A4 648 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 RP1L1Q8IWN7 2480 aaPredicted RBP13.85□□□□□ -0.19
TCOF1-207ENST00000504761 NELL1Q92832 810 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 HCFC2Q9Y5Z7 792 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 OR1F1O43749 312 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 SERPINI2O75830 405 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 HOXB2P14652 356 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 NCK1P16333 377 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 NTSP30990 170 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 OCA2Q04671 838 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 TAZQ16635 292 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 CCNYL2Q5T2Q4 361 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 NADSYN1Q6IA69 706 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 ENPP7Q6UWV6 458 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 CHSY3Q70JA7 882 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 DHRSXQ8N5I4 330 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 KCNJ9Q92806 393 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 SMARCD2Q92925 531 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 SKA1Q96BD8 255 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 KLF16Q9BXK1 252 aaPredicted RBP13.85□□□□□ -0.19
TCOF1-207ENST00000504761 PCDHAC1Q9H158 963 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 MRM3Q9HC36 420 aaKnown RBP13.85□□□□□ -0.19
TCOF1-207ENST00000504761 MAGEE1Q9HCI5 957 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 SAGE1Q9NXZ1 904 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 KCNK6Q9Y257 313 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 LRRC72A6NJI9 287 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 SOCS5O75159 536 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 STATHP02808 62 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 HNRNPA1P09651 372 aaKnown RBP eCLIP13.85□□□□□ -0.19
TCOF1-207ENST00000504761 BDKRB1P46663 353 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 MANFP55145 182 aaKnown RBP13.85□□□□□ -0.19
TCOF1-207ENST00000504761 CASP9P55211 416 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 ILF3Q12906 894 aaKnown RBP eCLIP13.85□□□□□ -0.19
TCOF1-207ENST00000504761 TMED1Q13445 227 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 FRMD7Q6ZUT3 714 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 PGAM4Q8N0Y7 254 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 LCN9Q8WX39 176 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 SLC39A13Q96H72 371 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 SMAD5Q99717 465 aaKnown RBP13.85□□□□□ -0.19
TCOF1-207ENST00000504761 BOCQ9BWV1 1114 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 H2AFY2Q9P0M6 372 aaPredicted RBP13.85□□□□□ -0.19
TCOF1-207ENST00000504761 WASF2Q9Y6W5 498 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 DOCK1Q14185 1865 aa13.85□□□□□ -0.19
TCOF1-207ENST00000504761 LOC730098B7Z3J9 87 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 RECQL5O94762 991 aaPredicted RBP13.84□□□□□ -0.19
TCOF1-207ENST00000504761 MYOGP15173 224 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 MTX3Q5HYI7 312 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 MED27Q6P2C8 311 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 CYP2U1Q7Z449 544 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 ZNF438Q7Z4V0 828 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 PATL1Q86TB9 770 aaKnown RBP13.84□□□□□ -0.19
TCOF1-207ENST00000504761 MICU2Q8IYU8 434 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 OR4F6Q8NGB9 312 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 ITCHQ96J02 903 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 SPACA7Q96KW9 195 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 MCMBPQ9BTE3 642 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 ZNF831Q5JPB2 1677 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 FAM58BPP0C7Q3 252 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 NFKB2Q00653 900 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 PPP1R3AQ16821 1122 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 GLYATQ6IB77 296 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 NT5C3BQ969T7 300 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 OTUB2Q96DC9 234 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 SLC7A8Q9UHI5 535 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 OGDHLQ9ULD0 1010 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 DOCK3Q8IZD9 2030 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 SRCP12931 536 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 DGKQP52824 942 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 LIPEQ05469 1076 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 ITPRIPL2Q3MIP1 535 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 ATP13A5Q4VNC0 1218 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 MBOAT1Q6ZNC8 495 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 B4GALNT2Q8NHY0 566 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 FIBINQ8TAL6 211 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 C1orf109Q9NX04 203 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 CXXC1Q9P0U4 656 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms