RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 PCDHGB2Q9Y5G2 931 aa9.85□□□□□ -0.83
NUP54-203ENST00000504173 CSNK1G3Q9Y6M4 447 aa9.85□□□□□ -0.83
NUP54-203ENST00000504173 CABIN1Q9Y6J0 2220 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 A0A087WUV0 522 aaPredicted RBP9.84□□□□□ -0.83
NUP54-203ENST00000504173 FAM159BA6NKW6 160 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 IQCF5A8MTL0 148 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 CXorf49A8MYA2 514 aaPredicted RBP9.84□□□□□ -0.83
NUP54-203ENST00000504173 E5RI56 91 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 LMO7DNF2Z398 122 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 H3BMM5 538 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 YY2O15391 372 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 RIPK2O43353 540 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 SNX2O60749 519 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 KCNJ13O60928 360 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 PIAS1O75925 651 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 HAUS5O94927 633 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 GSTM1P09488 218 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 PKMP14618 531 aaKnown RBP9.84□□□□□ -0.83
NUP54-203ENST00000504173 LEPRP48357 1165 aaKnown RBP9.84□□□□□ -0.83
NUP54-203ENST00000504173 CD151P48509 253 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 ADARP55265 1226 aaKnown RBP9.84□□□□□ -0.83
NUP54-203ENST00000504173 GSTM4Q03013 218 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 TLE3Q04726 772 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 NAB1Q13506 487 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 EFTUD2Q15029 972 aaKnown RBP eCLIP9.84□□□□□ -0.83
NUP54-203ENST00000504173 DEFB133Q30KQ1 61 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 KBTBD12Q3ZCT8 623 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 CTSL3PQ5NE16 218 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 KANSL1Q7Z3B3 1105 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 STRA8Q7Z7C7 330 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 GALNT7Q86SF2 657 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 NRROSQ86YC3 692 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 MARCH9Q86YJ5 346 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 KRT222Q8N1A0 295 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 SLC25A45Q8N413 288 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 PPM1NQ8N819 430 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 FAM46DQ8NEK8 389 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 OR2L2Q8NH16 312 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 UHMK1Q8TAS1 419 aaKnown RBP9.84□□□□□ -0.83
NUP54-203ENST00000504173 LKAAEAR1Q8TD35 194 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 AENQ8WTP8 325 aaKnown RBP9.84□□□□□ -0.83
NUP54-203ENST00000504173 ELMO1Q92556 727 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 PANX3Q96QZ0 392 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 CYTH2Q99418 400 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 CPNE1Q99829 537 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 DUSP23Q9BVJ7 150 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 SMYD2Q9NRG4 433 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 NLGN3Q9NZ94 848 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 TAAR2Q9P1P5 351 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 SLC23A2Q9UGH3 650 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 RABGEF1Q9UJ41 708 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 RAB21Q9UL25 225 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 ST14Q9Y5Y6 855 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 PSAT1Q9Y617 370 aa9.84□□□□□ -0.83
NUP54-203ENST00000504173 PIKFYVEQ9Y2I7 2098 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 KLHL33A6NCF5 533 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 B4DGG1 531 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 TPP1O14773 563 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 FLRT2O43155 660 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 NIPSNAP2O75323 286 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 C1QAP02745 245 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 AHSGP02765 367 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 ABHD2P08910 425 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 CHRM3P20309 590 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 IDSP22304 550 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 GABRB3P28472 473 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 GP5P40197 560 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 GRK6P43250 576 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 CLCNKAP51800 687 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 CSE1LP55060 971 aaKnown RBP9.83□□□□□ -0.84
NUP54-203ENST00000504173 DMPKQ09013 629 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 BOP1Q14137 746 aaKnown RBP9.83□□□□□ -0.84
NUP54-203ENST00000504173 NFE2L1Q14494 772 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 TMED2Q15363 201 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 KLHL38Q2WGJ6 581 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 MAP9Q49MG5 647 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 SYTL3Q4VX76 610 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 C6orf132Q5T0Z8 1188 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 EMBQ6PCB8 327 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 LVRNQ6Q4G3 990 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 ZNF574Q6ZN55 896 aaPredicted RBP9.83□□□□□ -0.84
NUP54-203ENST00000504173 FAM83HQ6ZRV2 1179 aaPredicted RBP9.83□□□□□ -0.84
NUP54-203ENST00000504173 CFAP206Q8IYR0 622 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 EID2Q8N6I1 236 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 GPATCH11Q8N954 259 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 OR4C6Q8NH72 309 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 SETD7Q8WTS6 366 aaKnown RBP9.83□□□□□ -0.84
NUP54-203ENST00000504173 UBLCP1Q8WVY7 318 aaPredicted RBP9.83□□□□□ -0.84
NUP54-203ENST00000504173 FAM136AQ96C01 138 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 MED8Q96G25 268 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 ATXN7L3BQ96GX2 97 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 BIRC8Q96P09 236 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 NDNQ99608 321 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 AARSD1Q9BTE6 412 aaKnown RBP9.83□□□□□ -0.84
NUP54-203ENST00000504173 FUT8Q9BYC5 575 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 DPEP2Q9H4A9 486 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 ACSS3Q9H6R3 686 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 COG4Q9H9E3 785 aa9.83□□□□□ -0.84
NUP54-203ENST00000504173 SARS2Q9NP81 518 aaKnown RBP9.83□□□□□ -0.84
NUP54-203ENST00000504173 SPATS2LQ9NUQ6 558 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms