RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 KANSL1LA0AUZ9 987 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 DYTNA2CJ06 578 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 TRIM64A6NGJ6 449 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 A8MX80 341 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 TRBC1P01850 177 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 BPIP17213 487 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 ACRV1P26436 265 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 HOXD10P28358 340 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 HNF1BP35680 557 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 CCL23P55773 120 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 CDKN3Q16667 212 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 TXNDC8Q6A555 127 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 Q6ZNB5 142 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 MBOAT1Q6ZNC8 495 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 DNAJB7Q7Z6W7 309 aaPredicted RBP9.68□□□□□ -0.86
CLIP1-204ENST00000501271 ZSWIM9Q86XI8 627 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 RIMKLAQ8IXN7 391 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 ARL14EPQ8N8R7 260 aaPredicted RBP9.68□□□□□ -0.86
CLIP1-204ENST00000501271 OSCP1Q8WVF1 389 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 EGFL8Q99944 293 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 SEZ6LQ9BYH1 1024 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 FAM126AQ9BYI3 521 aaPredicted RBP9.68□□□□□ -0.86
CLIP1-204ENST00000501271 VAPAQ9P0L0 249 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 HSFX1Q9UBD0 423 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 MAGEL2Q9UJ55 1249 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 DENND4CQ5VZ89 1909 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 LAMA3Q16787 3333 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 A0A087WXM4 84 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 TRBV5-4A0A0C4DH59 114 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 GOLGA8CPA6NN73 597 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 CLOCKO15516 846 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 DFNA5O60443 496 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 PQBP1O60828 265 aaKnown RBP9.68□□□□□ -0.86
CLIP1-204ENST00000501271 CDH1P12830 882 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 SLC2A4P14672 509 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 ITGALP20701 1170 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 CAPGP40121 348 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 RGS4P49798 205 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 CTBSQ01459 385 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 HMGCS1Q01581 520 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 SEMG2Q02383 582 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 PWP1Q13610 501 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 VEPH1Q14D04 833 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 TMEM214Q6NUQ4 689 aaKnown RBP9.68□□□□□ -0.86
CLIP1-204ENST00000501271 DEFB128Q7Z7B8 93 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 DHRSXQ8N5I4 330 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 ZBTB2Q8N680 514 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 CARS2Q9HA77 564 aaKnown RBP9.68□□□□□ -0.86
CLIP1-204ENST00000501271 NTN4Q9HB63 628 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 CD320Q9NPF0 282 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 C8orf4Q9NR00 106 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 TUBA8Q9NY65 449 aaPredicted RBP9.68□□□□□ -0.86
CLIP1-204ENST00000501271 ETAA1Q9NY74 926 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 WWOXQ9NZC7 414 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 CLEC4EQ9ULY5 219 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 HEMK1Q9Y5R4 338 aaPredicted RBP9.68□□□□□ -0.86
CLIP1-204ENST00000501271 CPQQ9Y646 472 aa9.68□□□□□ -0.86
CLIP1-204ENST00000501271 GLYATL1P3A0A0U1RQE8 302 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 UPK1AO00322 258 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 PRRG1O14668 218 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 LATS1O95835 1130 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 SOD2P04179 222 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 GGT1P19440 569 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 DGKAP23743 735 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 BCL2L1Q07817 233 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 CHRNA6Q15825 494 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 GPRC6AQ5T6X5 926 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 TPGS2Q68CL5 300 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 PRR23BQ6ZRT6 265 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 TSPAN33Q86UF1 283 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 ADGRG2Q8IZP9 1017 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 FAM86B1Q8N7N1 296 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 SLC13A3Q8WWT9 602 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 RHBDF1Q96CC6 855 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 DTNBP1Q96EV8 351 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 PPP3R2Q96LZ3 170 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 ZNF583Q96ND8 569 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 CD244Q9BZW8 370 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 TNKS2Q9H2K2 1166 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 IKZF5Q9H5V7 419 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 GPBP1L1Q9HC44 474 aaPredicted RBP9.67□□□□□ -0.86
CLIP1-204ENST00000501271 ZFP14Q9HCL3 533 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 OPTCQ9UBM4 332 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 KLQ9UEF7 1012 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 CRLS1Q9UJA2 301 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 H0Y858 1186 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 ZNF821O75541 412 aaPredicted RBP9.67□□□□□ -0.86
CLIP1-204ENST00000501271 KCNH1O95259 989 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 CDK4P11802 303 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 PCNAP12004 261 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 TCF3P15923 654 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 FAM174BQ3ZCQ3 159 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 OTUD3Q5T2D3 398 aaPredicted RBP9.67□□□□□ -0.86
CLIP1-204ENST00000501271 ABRAXAS1Q6UWZ7 409 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 DNAJC14Q6Y2X3 702 aaPredicted RBP9.67□□□□□ -0.86
CLIP1-204ENST00000501271 USP51Q70EK9 711 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 GPR141Q7Z602 305 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 PATL1Q86TB9 770 aaKnown RBP9.67□□□□□ -0.86
CLIP1-204ENST00000501271 PAF1Q8N7H5 531 aa9.67□□□□□ -0.86
CLIP1-204ENST00000501271 OR8J3Q8NGG0 315 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms